BLASTX nr result

ID: Coptis24_contig00005041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005041
         (1705 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266878.1| PREDICTED: uncharacterized protein LOC100255...    67   1e-08
ref|XP_002331820.1| predicted protein [Populus trichocarpa] gi|2...    58   7e-06
emb|CAN66887.1| hypothetical protein VITISV_012135 [Vitis vinifera]    58   7e-06

>ref|XP_002266878.1| PREDICTED: uncharacterized protein LOC100255280 [Vitis vinifera]
            gi|302143706|emb|CBI22567.3| unnamed protein product
            [Vitis vinifera]
          Length = 673

 Score = 67.4 bits (163), Expect = 1e-08
 Identities = 53/172 (30%), Positives = 83/172 (48%), Gaps = 12/172 (6%)
 Frame = +3

Query: 933  SLYPSSHPSISLRQCEEKRRTDECVTLRHFEMSGTAYIKSESITQNRKEKGVEDPV-LDR 1109
            +L P     ++LR+CE+K R +    L     +     +SE +T    E    + +  D 
Sbjct: 450  ALTPPKRRLMTLRECEKKGRAE--TNLASNLNARETENQSEILTNEDVEASETEEIGSDS 507

Query: 1110 ECKKFNEFCVNGP---------NEWEREDNSINPNKAGDV-YTLFNSRIKANRNWRN-WE 1256
            E +    F +N           NE E E N       G+V +    SRI+ N + ++ WE
Sbjct: 508  EGESLGGFIINDSEVSGGDGAYNESEEESN-------GNVDFVDIISRIRRNSDKKSKWE 560

Query: 1257 SAIDMDTSFEAEPKLCMRAVCALYRQHKCQEKPMGQSLHFTSRGFSKSDERR 1412
               DM  +F  +P+LCM+AVCALYRQ   +EK + ++++   RGFS+ D  R
Sbjct: 561  FEADMLAAFGKDPELCMKAVCALYRQQTSEEKTVKETIYSNQRGFSQCDALR 612


>ref|XP_002331820.1| predicted protein [Populus trichocarpa] gi|222875058|gb|EEF12189.1|
            predicted protein [Populus trichocarpa]
          Length = 580

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
 Frame = +3

Query: 1218 SRIKANRNWR-NWESAIDMDTSFEAEPKLCMRAVCALYRQHKCQEKPMGQSLHFTSRGFS 1394
            SR + +++ +  WE   DM + F  +P+LCM+AVCALYRQ   +EK   ++LH   RGFS
Sbjct: 449  SRFQRSKDHKFKWEFEGDMLSDFGKDPELCMKAVCALYRQQSDEEKLNKETLHGNGRGFS 508

Query: 1395 KSDERR 1412
            K D  R
Sbjct: 509  KFDAPR 514


>emb|CAN66887.1| hypothetical protein VITISV_012135 [Vitis vinifera]
          Length = 628

 Score = 58.2 bits (139), Expect = 7e-06
 Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 5/107 (4%)
 Frame = +3

Query: 1107 RECKKFNEFCVN---GPNEWEREDNS-INPNKAGDVYTLFNSRIKANRNWRN-WESAIDM 1271
            REC+K      N     N  E E+ S I  N+  +        I+ N + ++ WE   DM
Sbjct: 467  RECEKKGRAETNLASNLNARETENQSEILTNEDVEASETEEXGIRRNSDKKSKWEFEADM 526

Query: 1272 DTSFEAEPKLCMRAVCALYRQHKCQEKPMGQSLHFTSRGFSKSDERR 1412
              +F  +P+LCM+AVCALYRQ   +EK + ++++   RGFS+ D  R
Sbjct: 527  LAAFGKDPELCMKAVCALYRQQTSEEKTVKETIYSNQRGFSQCDALR 573


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