BLASTX nr result

ID: Coptis24_contig00005037 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005037
         (519 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN61148.1| hypothetical protein VITISV_029171 [Vitis vinife...   149   2e-34
ref|XP_002310150.1| predicted protein [Populus trichocarpa] gi|2...   144   7e-33
ref|XP_002277488.2| PREDICTED: uncharacterized protein LOC100259...   120   1e-25
ref|XP_002523565.1| conserved hypothetical protein [Ricinus comm...   117   7e-25
gb|AFK37699.1| unknown [Lotus japonicus]                              112   2e-23

>emb|CAN61148.1| hypothetical protein VITISV_029171 [Vitis vinifera]
           gi|296082431|emb|CBI21436.3| unnamed protein product
           [Vitis vinifera]
          Length = 171

 Score =  149 bits (376), Expect = 2e-34
 Identities = 82/159 (51%), Positives = 104/159 (65%), Gaps = 9/159 (5%)
 Frame = +2

Query: 65  MACIDMFKTDHQGLCAPMSPRISFSNDFIDTQQTIKHEHNSSREVPVASEHFEFSVNRYT 244
           MAC+DM+ ++H+GLCAPMSPRISFSNDF+++QQ IKHE  SSRE PV+S+ FEFSV  Y+
Sbjct: 1   MACLDMYNSEHKGLCAPMSPRISFSNDFVESQQMIKHE-RSSREAPVSSD-FEFSVTNYS 58

Query: 245 MMPADELFFKGALLPFK-------KTTXXXXXXXXXXXXXXXXRPPKVPTKWKEFLGLKK 403
           MM ADELFFKG LLPFK       + T                RPPK  T+WK  LGLK+
Sbjct: 59  MMSADELFFKGRLLPFKDNCTNHSQKTTLREELLVVDEEEVSRRPPKGSTRWKGLLGLKR 118

Query: 404 SHILYKKPEKSEEPTERVVGVNGSKS--IHQENHISKIS 514
           +HI  KK +K++ P      V G +S  +H+E H+ K S
Sbjct: 119 THIGSKKTDKTDGPM-----VEGKRSVLVHEEAHVGKTS 152


>ref|XP_002310150.1| predicted protein [Populus trichocarpa] gi|222853053|gb|EEE90600.1|
           predicted protein [Populus trichocarpa]
          Length = 175

 Score =  144 bits (363), Expect = 7e-33
 Identities = 83/160 (51%), Positives = 102/160 (63%), Gaps = 9/160 (5%)
 Frame = +2

Query: 65  MACIDMFKTDHQGLCAPMSPRISFSNDFIDTQQTIKHEHNSSREVPVASEHFEFSVNRYT 244
           MAC+DM+ ++H+G C PMSPRISFSNDF+D+QQ +K E  SSRE PV+++ FEFSV  Y+
Sbjct: 1   MACLDMYNSEHKGHCPPMSPRISFSNDFVDSQQIMKQE-RSSRETPVSTD-FEFSVTNYS 58

Query: 245 MMPADELFFKGALLPFK--------KTTXXXXXXXXXXXXXXXXRPPKVPTKWKEFLGLK 400
           MM ADELFFKG LLPFK        +T                 RPPK  T+WK  LGLK
Sbjct: 59  MMSADELFFKGRLLPFKDNGSNQMQRTIRDELLVDDDEGDEVSPRPPKGSTRWKGLLGLK 118

Query: 401 KSHILYKKPEKSEEPTERVVGVN-GSKSIHQENHISKISQ 517
           +SHI  KK +KSE   ER VG +  S  +H+E   SK SQ
Sbjct: 119 RSHIGSKKVDKSEGSMERSVGESRRSGFVHEEVQHSKSSQ 158


>ref|XP_002277488.2| PREDICTED: uncharacterized protein LOC100259450 [Vitis vinifera]
          Length = 154

 Score =  120 bits (300), Expect = 1e-25
 Identities = 71/142 (50%), Positives = 88/142 (61%), Gaps = 9/142 (6%)
 Frame = +2

Query: 116 MSPRISFSNDFIDTQQTIKHEHNSSREVPVASEHFEFSVNRYTMMPADELFFKGALLPFK 295
           MSPRISFSNDF+++QQ IKHE  SSRE PV+S+ FEFSV  Y+MM ADELFFKG LLPFK
Sbjct: 1   MSPRISFSNDFVESQQMIKHER-SSREAPVSSD-FEFSVTNYSMMSADELFFKGRLLPFK 58

Query: 296 -------KTTXXXXXXXXXXXXXXXXRPPKVPTKWKEFLGLKKSHILYKKPEKSEEPTER 454
                  + T                RPPK  T+WK  LGLK++HI  KK +K++ P   
Sbjct: 59  DNCTNHSQKTTLREELLVVDEEEVSRRPPKGSTRWKGLLGLKRTHIGSKKTDKTDGPM-- 116

Query: 455 VVGVNGSKS--IHQENHISKIS 514
              V G +S  +H+E H+ K S
Sbjct: 117 ---VEGKRSVLVHEEAHVGKTS 135


>ref|XP_002523565.1| conserved hypothetical protein [Ricinus communis]
           gi|223537127|gb|EEF38760.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 185

 Score =  117 bits (294), Expect = 7e-25
 Identities = 76/171 (44%), Positives = 97/171 (56%), Gaps = 20/171 (11%)
 Frame = +2

Query: 65  MACIDMFKTDHQG-LCAPMSPRISFSNDFIDTQQTIKHEHNSSR--EVPVASEHFEFSVN 235
           MAC+DM+ ++HQG  C P+SPRISFSNDF D+QQ IK E +SS   E PV+++ FEFSV 
Sbjct: 1   MACLDMYNSEHQGQYCPPISPRISFSNDFADSQQIIKQERSSSSRSEAPVSTD-FEFSVT 59

Query: 236 RYTMMPADELFFKGALLPFKKT-------------TXXXXXXXXXXXXXXXXRPPK-VPT 373
            Y+MM ADELFFKG LLPFK                                RPPK   T
Sbjct: 60  NYSMMSADELFFKGRLLPFKDNGNNNKSNQMQRTIRDELLVDDDDGYHGVSHRPPKGSST 119

Query: 374 KWKEFLGLKKSHILYKKPEKSEEPTERVVGVNGSKSI---HQENHISKISQ 517
           +WK  LGLK+SHI  KK +KS    +   G + ++ +   H+E  + K SQ
Sbjct: 120 RWKGLLGLKRSHIGSKKVDKSS--CDGSFGFDQNRRLGFAHEEMDVGKSSQ 168


>gb|AFK37699.1| unknown [Lotus japonicus]
          Length = 176

 Score =  112 bits (281), Expect = 2e-23
 Identities = 68/145 (46%), Positives = 82/145 (56%), Gaps = 15/145 (10%)
 Frame = +2

Query: 65  MACIDMFKTDH-QGLCAPMSPRISFSNDFIDTQQTIKHEHNSSRE--VPVASEHFEFSVN 235
           MAC+DM+ ++  QG   PMSPRISFSNDF+D QQ +K E NS  +  +PV S  FEFS  
Sbjct: 1   MACLDMYNSERKQGHHHPMSPRISFSNDFVDVQQALKQERNSRSDTSLPVVSSDFEFSTT 60

Query: 236 RYTMMPADELFFKGALLPFK------------KTTXXXXXXXXXXXXXXXXRPPKVPTKW 379
            Y+MM ADELF KG LLP+K             TT                RPPK   +W
Sbjct: 61  NYSMMSADELFSKGRLLPYKDSCNNHNQMQRATTTLKEELLNNDDEYNFSRRPPK--GRW 118

Query: 380 KEFLGLKKSHILYKKPEKSEEPTER 454
           K  LGLKK HI  KK E+SE  ++R
Sbjct: 119 KGLLGLKKYHIGSKKVERSEGSSDR 143


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