BLASTX nr result

ID: Coptis24_contig00005032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005032
         (927 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521893.1| lipid binding protein, putative [Ricinus com...   170   5e-40
gb|AFK35164.1| unknown [Medicago truncatula]                          164   3e-38
ref|XP_002281828.1| PREDICTED: uncharacterized protein LOC100264...   160   3e-37
ref|XP_002314750.1| predicted protein [Populus trichocarpa] gi|2...   159   9e-37
ref|NP_001238490.1| uncharacterized protein LOC100500207 precurs...   158   2e-36

>ref|XP_002521893.1| lipid binding protein, putative [Ricinus communis]
           gi|223538931|gb|EEF40529.1| lipid binding protein,
           putative [Ricinus communis]
          Length = 120

 Score =  170 bits (430), Expect = 5e-40
 Identities = 76/120 (63%), Positives = 95/120 (79%)
 Frame = -2

Query: 902 MASISRTPYIAMTIFLLASYAHIKETKAAGECGRTPVNNAAVSLSPCLGAAGSVSAKVPP 723
           M S  R  + A+ +FLLAS   + +  AAGECG+TP+ +AA SLSPCL A G+V A VPP
Sbjct: 1   MVSSMRACFAAVLVFLLASNGFLSDVDAAGECGKTPIRSAAASLSPCLTAVGNVRASVPP 60

Query: 722 LCCSKVAALLKNSPRCLCAVFLSPLVIKAGLKPAVAITIPKRCNIRNRPIGKKCGRYTLP 543
            CCSKV AL+K +P+CLCAV LSPL ++AG+KP +AITIPKRCNI+NRP+GKKCGRYT+P
Sbjct: 61  ACCSKVGALIKTAPKCLCAVLLSPLAMQAGIKPGIAITIPKRCNIKNRPVGKKCGRYTVP 120


>gb|AFK35164.1| unknown [Medicago truncatula]
          Length = 120

 Score =  164 bits (415), Expect = 3e-38
 Identities = 76/115 (66%), Positives = 92/115 (80%)
 Frame = -2

Query: 887 RTPYIAMTIFLLASYAHIKETKAAGECGRTPVNNAAVSLSPCLGAAGSVSAKVPPLCCSK 708
           RT    + +FLLAS   I E++A GECGRTP+ +AA SLSPCLGA  +V AKVPP+CC++
Sbjct: 6   RTFLATVVMFLLASSVFILESEAVGECGRTPIGSAAASLSPCLGAVRNVRAKVPPVCCAR 65

Query: 707 VAALLKNSPRCLCAVFLSPLVIKAGLKPAVAITIPKRCNIRNRPIGKKCGRYTLP 543
           V ALL+ SPRCLC+V LSPL  +A + PA+AIT+PKRCNIRNRP GKKCGRYTLP
Sbjct: 66  VGALLRTSPRCLCSVLLSPLAKQAKINPAIAITVPKRCNIRNRPAGKKCGRYTLP 120


>ref|XP_002281828.1| PREDICTED: uncharacterized protein LOC100264479 [Vitis vinifera]
           gi|297737556|emb|CBI26757.3| unnamed protein product
           [Vitis vinifera]
          Length = 120

 Score =  160 bits (406), Expect = 3e-37
 Identities = 73/120 (60%), Positives = 91/120 (75%)
 Frame = -2

Query: 902 MASISRTPYIAMTIFLLASYAHIKETKAAGECGRTPVNNAAVSLSPCLGAAGSVSAKVPP 723
           MAS   T + A+   +L S A ++E   AGECG+TP+ +AA SLS CL AAG+  AKVPP
Sbjct: 1   MASNMPTCFAAVMALMLVSQAFVQEANGAGECGKTPIQSAAASLSSCLSAAGNAKAKVPP 60

Query: 722 LCCSKVAALLKNSPRCLCAVFLSPLVIKAGLKPAVAITIPKRCNIRNRPIGKKCGRYTLP 543
            CC+KV AL+  +P+CLCAV LSPL  KAG+KPA+AITIPKRCNI+NRP+GKKCG Y +P
Sbjct: 61  TCCTKVTALINTAPKCLCAVVLSPLAKKAGIKPAIAITIPKRCNIKNRPVGKKCGSYIIP 120


>ref|XP_002314750.1| predicted protein [Populus trichocarpa] gi|222863790|gb|EEF00921.1|
           predicted protein [Populus trichocarpa]
          Length = 120

 Score =  159 bits (402), Expect = 9e-37
 Identities = 71/111 (63%), Positives = 89/111 (80%)
 Frame = -2

Query: 875 IAMTIFLLASYAHIKETKAAGECGRTPVNNAAVSLSPCLGAAGSVSAKVPPLCCSKVAAL 696
           + + + L+AS A I +  AAGECG+TP+ +AA SLSPCLGAAG+  A VPP CCSKV AL
Sbjct: 10  VTVLVVLVASNAFISDVNAAGECGKTPIRSAAASLSPCLGAAGNARAAVPPACCSKVTAL 69

Query: 695 LKNSPRCLCAVFLSPLVIKAGLKPAVAITIPKRCNIRNRPIGKKCGRYTLP 543
           +K +P+CLCAV LSPL  +AG+KP +AITIPKRC+I+NR  GKKCG+YTLP
Sbjct: 70  IKTAPKCLCAVLLSPLAKQAGIKPGIAITIPKRCSIKNRQAGKKCGKYTLP 120


>ref|NP_001238490.1| uncharacterized protein LOC100500207 precursor [Glycine max]
           gi|255629702|gb|ACU15200.1| unknown [Glycine max]
          Length = 123

 Score =  158 bits (399), Expect = 2e-36
 Identities = 75/115 (65%), Positives = 88/115 (76%)
 Frame = -2

Query: 887 RTPYIAMTIFLLASYAHIKETKAAGECGRTPVNNAAVSLSPCLGAAGSVSAKVPPLCCSK 708
           R   +A  +FLLAS   I E + AGECG+TP+ +AA SLSPCLGA  +V AKVP  CC++
Sbjct: 9   RALLVAFLMFLLASEVLILEAEGAGECGKTPIGSAAASLSPCLGAVSNVRAKVPLACCAR 68

Query: 707 VAALLKNSPRCLCAVFLSPLVIKAGLKPAVAITIPKRCNIRNRPIGKKCGRYTLP 543
           V ALLK +PRCLCAV LSPL  +A + PA AITIPKRCNIRNRP GKKCGRYT+P
Sbjct: 69  VGALLKTAPRCLCAVLLSPLAKQAKINPATAITIPKRCNIRNRPAGKKCGRYTVP 123


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