BLASTX nr result

ID: Coptis24_contig00005028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005028
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAC80261.1| V-ATPase subunit c [Beta vulgaris]                    164   7e-39
sp|P68161.1|VATL_MESCR RecName: Full=V-type proton ATPase 16 kDa...   164   7e-39
gb|AAA82977.1| vacuolar H+-ATPase proteolipid (16 kDa) subunit [...   164   9e-39
ref|XP_004133996.1| PREDICTED: V-type proton ATPase 16 kDa prote...   162   3e-38
emb|CAH58637.1| vacuolar H+-ATPase C subunit [Plantago major] gi...   162   3e-38

>emb|CAC80261.1| V-ATPase subunit c [Beta vulgaris]
          Length = 135

 Score =  164 bits (415), Expect = 7e-39
 Identities = 89/122 (72%), Positives = 90/122 (73%)
 Frame = +2

Query: 29  MSTVFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 208
           MSTVF+GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSTVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 209 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXXXIGIVGDAG 388
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                   IGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 389 VR 394
           VR
Sbjct: 121 VR 122


>sp|P68161.1|VATL_MESCR RecName: Full=V-type proton ATPase 16 kDa proteolipid subunit;
           Short=V-ATPase 16 kDa proteolipid subunit; AltName:
           Full=Vacuolar proton pump 16 kDa proteolipid subunit
           gi|60416209|sp|P68162.1|VATL_BETVU RecName: Full=V-type
           proton ATPase 16 kDa proteolipid subunit; Short=V-ATPase
           16 kDa proteolipid subunit; AltName: Full=Vacuolar
           proton pump 16 kDa proteolipid subunit
           gi|1429264|emb|CAA67356.1| subunit c of V-type ATPase
           [Beta vulgaris subsp. vulgaris]
           gi|1495683|emb|CAA64455.1| V-type ATPase c subunit
           [Mesembryanthemum crystallinum]
           gi|18072738|emb|CAC79689.1| subunit c of V-type ATPase
           [Beta vulgaris]
          Length = 165

 Score =  164 bits (415), Expect = 7e-39
 Identities = 89/122 (72%), Positives = 90/122 (73%)
 Frame = +2

Query: 29  MSTVFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 208
           MSTVF+GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSTVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 209 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXXXIGIVGDAG 388
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                   IGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 389 VR 394
           VR
Sbjct: 121 VR 122


>gb|AAA82977.1| vacuolar H+-ATPase proteolipid (16 kDa) subunit [Gossypium
           hirsutum]
          Length = 165

 Score =  164 bits (414), Expect = 9e-39
 Identities = 89/122 (72%), Positives = 89/122 (72%)
 Frame = +2

Query: 29  MSTVFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 208
           MST FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSTTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 209 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXXXIGIVGDAG 388
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                   IGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 389 VR 394
           VR
Sbjct: 121 VR 122


>ref|XP_004133996.1| PREDICTED: V-type proton ATPase 16 kDa proteolipid subunit-like
           [Cucumis sativus] gi|449525002|ref|XP_004169510.1|
           PREDICTED: V-type proton ATPase 16 kDa proteolipid
           subunit-like [Cucumis sativus]
          Length = 165

 Score =  162 bits (410), Expect = 3e-38
 Identities = 88/122 (72%), Positives = 89/122 (72%)
 Frame = +2

Query: 29  MSTVFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 208
           MS+ FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSSAFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 209 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXXXIGIVGDAG 388
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                   IGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAG 120

Query: 389 VR 394
           VR
Sbjct: 121 VR 122


>emb|CAH58637.1| vacuolar H+-ATPase C subunit [Plantago major]
           gi|106879597|emb|CAJ38382.1| vacuolar H+-ATPase, subunit
           C 2 [Plantago major]
          Length = 165

 Score =  162 bits (410), Expect = 3e-38
 Identities = 88/122 (72%), Positives = 89/122 (72%)
 Frame = +2

Query: 29  MSTVFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 208
           MS+ FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV
Sbjct: 1   MSSTFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVV 60

Query: 209 MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXXXIGIVGDAG 388
           MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                   IGIVGDAG
Sbjct: 61  MAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAG 120

Query: 389 VR 394
           VR
Sbjct: 121 VR 122


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