BLASTX nr result

ID: Coptis24_contig00005026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005026
         (1118 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275584.1| PREDICTED: uncharacterized protein LOC100247...   356   7e-96
emb|CBI16633.3| unnamed protein product [Vitis vinifera]              345   9e-93
ref|XP_002302509.1| predicted protein [Populus trichocarpa] gi|2...   327   3e-87
ref|XP_002511618.1| conserved hypothetical protein [Ricinus comm...   318   2e-84
ref|XP_003626721.1| hypothetical protein MTR_8g006290 [Medicago ...   317   3e-84

>ref|XP_002275584.1| PREDICTED: uncharacterized protein LOC100247848 [Vitis vinifera]
          Length = 305

 Score =  356 bits (913), Expect = 7e-96
 Identities = 170/261 (65%), Positives = 207/261 (79%)
 Frame = +1

Query: 115 NSPASSRVQNVIVMRHGDRIDNAEPLWTTTAKRPWDPPLIDSGKVRAFSTGRKLRNNLGF 294
           +S  S   QNV+VMRHGDR+DN EPLW +TA RPWDPPL D GKVRAF TGRKLR+ LGF
Sbjct: 42  DSSDSQHFQNVVVMRHGDRLDNTEPLWVSTAARPWDPPLADPGKVRAFCTGRKLRSQLGF 101

Query: 295 PINRVIVSPFTRCIQTASEVVSALCAVNDDTLVETSGDNISIDPSKLKVSVEFGLCEIIS 474
           PI+RV+VSPF RC+QTASEV+SALCA++DD  V  +GD ++IDPSKLKVS+EFGLCE++S
Sbjct: 102 PIHRVLVSPFLRCVQTASEVISALCAIDDDP-VNMTGDGVAIDPSKLKVSIEFGLCEMMS 160

Query: 475 REAIRPDFAPKDGIWGFKIPELEAKFPAGTVDTTAGLLYPEMPKWEESLLDARARYACVI 654
           REAIR + APKDG WGF + ELEA  PAGTVDTT   +Y E+P++EE +  +R RY  VI
Sbjct: 161 REAIRLELAPKDGNWGFNVSELEAMLPAGTVDTTVERVYQELPQYEEGVPGSRIRYEKVI 220

Query: 655 HELADKFPSENLLLVTHGEGVGVAISAFSKDTVVYEVEYCAYAHLQRQISFNSDRAISAG 834
             LADKFPSENLLLVTHGEGVGV+ISAF KD  VYEV+YCA++H +R I F ++ + +AG
Sbjct: 221 QALADKFPSENLLLVTHGEGVGVSISAFMKDATVYEVDYCAFSHSRRPIFFGNNESFTAG 280

Query: 835 NFDIATKHAQSGIRFCPASAV 897
           NF   TKH Q+GI + P S +
Sbjct: 281 NFQALTKHGQTGISYYPLSPI 301


>emb|CBI16633.3| unnamed protein product [Vitis vinifera]
          Length = 251

 Score =  345 bits (886), Expect = 9e-93
 Identities = 164/248 (66%), Positives = 199/248 (80%)
 Frame = +1

Query: 154 MRHGDRIDNAEPLWTTTAKRPWDPPLIDSGKVRAFSTGRKLRNNLGFPINRVIVSPFTRC 333
           MRHGDR+DN EPLW +TA RPWDPPL D GKVRAF TGRKLR+ LGFPI+RV+VSPF RC
Sbjct: 1   MRHGDRLDNTEPLWVSTAARPWDPPLADPGKVRAFCTGRKLRSQLGFPIHRVLVSPFLRC 60

Query: 334 IQTASEVVSALCAVNDDTLVETSGDNISIDPSKLKVSVEFGLCEIISREAIRPDFAPKDG 513
           +QTASEV+SALCA++DD  V  +GD ++IDPSKLKVS+EFGLCE++SREAIR + APKDG
Sbjct: 61  VQTASEVISALCAIDDDP-VNMTGDGVAIDPSKLKVSIEFGLCEMMSREAIRLELAPKDG 119

Query: 514 IWGFKIPELEAKFPAGTVDTTAGLLYPEMPKWEESLLDARARYACVIHELADKFPSENLL 693
            WGF + ELEA  PAGTVDTT   +Y E+P++EE +  +R RY  VI  LADKFPSENLL
Sbjct: 120 NWGFNVSELEAMLPAGTVDTTVERVYQELPQYEEGVPGSRIRYEKVIQALADKFPSENLL 179

Query: 694 LVTHGEGVGVAISAFSKDTVVYEVEYCAYAHLQRQISFNSDRAISAGNFDIATKHAQSGI 873
           LVTHGEGVGV+ISAF KD  VYEV+YCA++H +R I F ++ + +AGNF   TKH Q+GI
Sbjct: 180 LVTHGEGVGVSISAFMKDATVYEVDYCAFSHSRRPIFFGNNESFTAGNFQALTKHGQTGI 239

Query: 874 RFCPASAV 897
            + P S +
Sbjct: 240 SYYPLSPI 247


>ref|XP_002302509.1| predicted protein [Populus trichocarpa] gi|222844235|gb|EEE81782.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  327 bits (839), Expect = 3e-87
 Identities = 159/261 (60%), Positives = 203/261 (77%)
 Frame = +1

Query: 127 SSRVQNVIVMRHGDRIDNAEPLWTTTAKRPWDPPLIDSGKVRAFSTGRKLRNNLGFPINR 306
           S  +QNV+VMRHGDRID+ EPLW TTA RPWDPPL+++G++RAF TGRKL+ +LGFPI+R
Sbjct: 14  SIHLQNVVVMRHGDRIDSLEPLWVTTATRPWDPPLVEAGRIRAFCTGRKLKTDLGFPIHR 73

Query: 307 VIVSPFTRCIQTASEVVSALCAVNDDTLVETSGDNISIDPSKLKVSVEFGLCEIISREAI 486
           V VSPF RCIQTASEVVSALCAV+D   V  S   ++ID SKLKVS+E+GLCE+++REAI
Sbjct: 74  VFVSPFLRCIQTASEVVSALCAVDDGPDV-VSSLGVTIDSSKLKVSIEYGLCEMLNREAI 132

Query: 487 RPDFAPKDGIWGFKIPELEAKFPAGTVDTTAGLLYPEMPKWEESLLDARARYACVIHELA 666
           R D APKDG +GF I ELEA  P GTVD     +Y E+P+WEE+++ AR RY  +I  L 
Sbjct: 133 RSDCAPKDGNFGFNISELEAMLPTGTVDHAVKPVYEELPQWEETVMGARTRYEQIIKALT 192

Query: 667 DKFPSENLLLVTHGEGVGVAISAFSKDTVVYEVEYCAYAHLQRQISFNSDRAISAGNFDI 846
           DK+PSENLLLVTHGEGVGV++SAF KD  VYEV+YCAY+ L+R +  +  ++ +AG F++
Sbjct: 193 DKYPSENLLLVTHGEGVGVSVSAFLKDISVYEVDYCAYSQLRRSV-VHEKKSFTAGEFEV 251

Query: 847 ATKHAQSGIRFCPASAVALNA 909
            T + QSGI +C A+ +A  A
Sbjct: 252 LTHNGQSGISYCSANPMATGA 272


>ref|XP_002511618.1| conserved hypothetical protein [Ricinus communis]
           gi|223548798|gb|EEF50287.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 267

 Score =  318 bits (814), Expect = 2e-84
 Identities = 151/254 (59%), Positives = 198/254 (77%)
 Frame = +1

Query: 139 QNVIVMRHGDRIDNAEPLWTTTAKRPWDPPLIDSGKVRAFSTGRKLRNNLGFPINRVIVS 318
           Q+V+V+RHGDRIDN +PLWT+TA RPWDPPL+DSG +RAFSTGR L++ L FPI+RV VS
Sbjct: 12  QHVVVIRHGDRIDNFDPLWTSTAPRPWDPPLVDSGLIRAFSTGRNLKSRLAFPIHRVFVS 71

Query: 319 PFTRCIQTASEVVSALCAVNDDTLVETSGDNISIDPSKLKVSVEFGLCEIISREAIRPDF 498
           PF RC+QTAS+ VSALCA+ D   V T+GD I+IDPSK+KVS+E+GLCE+++ +AIR D 
Sbjct: 72  PFFRCVQTASQAVSALCALEDGPDV-TAGDGIAIDPSKVKVSIEYGLCEMLNTQAIRHDV 130

Query: 499 APKDGIWGFKIPELEAKFPAGTVDTTAGLLYPEMPKWEESLLDARARYACVIHELADKFP 678
           APKDG + F I ELEA  P+GTVD T   +Y E+P+WEE++  +R RY  ++  LADK+P
Sbjct: 131 APKDGKFSFNISELEALLPSGTVDHTVKPVYQELPRWEETVTSSRTRYEQIVKALADKYP 190

Query: 679 SENLLLVTHGEGVGVAISAFSKDTVVYEVEYCAYAHLQRQISFNSDRAISAGNFDIATKH 858
           SENLLLVTHGEGVGV++SAF KD  VYEVEYCAY+ L+R I    ++  + G F++ TK 
Sbjct: 191 SENLLLVTHGEGVGVSVSAFMKDVTVYEVEYCAYSELRRLI-LKEEQTYTTGEFEVLTKS 249

Query: 859 AQSGIRFCPASAVA 900
            ++GI + P+ + A
Sbjct: 250 GETGIGYYPSVSTA 263


>ref|XP_003626721.1| hypothetical protein MTR_8g006290 [Medicago truncatula]
           gi|355520743|gb|AET01197.1| hypothetical protein
           MTR_8g006290 [Medicago truncatula]
          Length = 272

 Score =  317 bits (812), Expect = 3e-84
 Identities = 156/272 (57%), Positives = 198/272 (72%), Gaps = 12/272 (4%)
 Frame = +1

Query: 100 MDPTTNSPASS------------RVQNVIVMRHGDRIDNAEPLWTTTAKRPWDPPLIDSG 243
           M+PT++S +SS            + QN+IVMRHGDRIDN +PLW +TA RPWDPPL++ G
Sbjct: 1   MNPTSSSSSSSSKSETMNPKKQTQYQNIIVMRHGDRIDNFDPLWISTAPRPWDPPLVEEG 60

Query: 244 KVRAFSTGRKLRNNLGFPINRVIVSPFTRCIQTASEVVSALCAVNDDTLVETSGDNISID 423
           +VRAF T RK RN  G+P++RV VSPF RCIQTA E V AL A++D+    T GD++ ID
Sbjct: 61  RVRAFCTARKFRNLFGYPLHRVFVSPFIRCIQTAKEAVIALSAIHDNPEALT-GDSLPID 119

Query: 424 PSKLKVSVEFGLCEIISREAIRPDFAPKDGIWGFKIPELEAKFPAGTVDTTAGLLYPEMP 603
           PSK+KVSVE+GLCE++SR AIR + APKDG WGF I E EA  PAGTVD     +Y E+P
Sbjct: 120 PSKIKVSVEYGLCEMMSRRAIRLEVAPKDGNWGFDISEREAMLPAGTVDKNVARVYKELP 179

Query: 604 KWEESLLDARARYACVIHELADKFPSENLLLVTHGEGVGVAISAFSKDTVVYEVEYCAYA 783
           KWEE L D RARY  ++ +LADK P+ENLLLVTHGEGVGVA S+F K T VYEV+YC Y 
Sbjct: 180 KWEEPLSDTRARYEKIVKDLADKHPTENLLLVTHGEGVGVAFSSFKKGTEVYEVDYCGYV 239

Query: 784 HLQRQISFNSDRAISAGNFDIATKHAQSGIRF 879
            L+R I F  D++ +AG F++ T   Q+G+++
Sbjct: 240 ELRRPI-FKKDQSFTAGEFEVLTNTGQTGVKY 270


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