BLASTX nr result
ID: Coptis24_contig00005024
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00005024
(1501 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273133.1| PREDICTED: geranylgeranyl diphosphate reduct... 664 0.0
ref|XP_002328221.1| predicted protein [Populus trichocarpa] gi|2... 660 0.0
ref|XP_002312852.1| predicted protein [Populus trichocarpa] gi|2... 660 0.0
ref|XP_002521639.1| geranylgeranyl hydrogenase, putative [Ricinu... 650 0.0
ref|XP_003519480.1| PREDICTED: geranylgeranyl diphosphate reduct... 615 e-173
>ref|XP_002273133.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic [Vitis
vinifera]
Length = 466
Score = 664 bits (1712), Expect = 0.0
Identities = 320/413 (77%), Positives = 364/413 (88%)
Frame = -3
Query: 1487 SNQLIHGRKLRAAVIGGGPAGSCAADALACGGIETFLIERSPAGAKPCGGAIPLCMLNEF 1308
SN + GRKLRAAVIGGGPAGS AA+ LA GGIETFL ERSPA +KPCGGAIPLCML EF
Sbjct: 52 SNPPLSGRKLRAAVIGGGPAGSSAAETLAAGGIETFLFERSPASSKPCGGAIPLCMLEEF 111
Query: 1307 SIPLDLIDRKVTQMKIISPSNLTVDFGKTLKSHEYIAMLRREVLDSYLRSRAQSNGANLV 1128
SIP +L+DR+VT+MKIISPSNLTVDFGKTLK +EYIAMLRREVLDS+LR RA+S GA +
Sbjct: 112 SIPPELVDRRVTRMKIISPSNLTVDFGKTLKPNEYIAMLRREVLDSFLRRRAESAGATAI 171
Query: 1127 TALFTHLEVPGSIYDPYIVHYNVNGSKHSIEADVVIGADGANSRVAISIDAGDYKCAIAF 948
TAL T L++P S PY++HYN GS+HS+ DVVIGADGANSRVA SI AGDY CAIAF
Sbjct: 172 TALVTSLDLPSSPASPYVIHYNAGGSRHSLAVDVVIGADGANSRVAKSIKAGDYSCAIAF 231
Query: 947 QERIKLPEEKMDYYRNLAEMYVGNDISPDFYGWVFPKCDHVAVGTGTVSSKQDIKLYQRG 768
QERIKLPEEKM+YY++LAEMYVGND+SPDFY WVFPKCDHVAVGTGTV SKQ+IKLYQRG
Sbjct: 232 QERIKLPEEKMEYYQDLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCSKQNIKLYQRG 291
Query: 767 IRDRVRKKIDGGKVIKVEAHPIPEHPRPMRVRGRVALVGDSAGYVTKCSGEGIYFAAKSG 588
IR+RV KI GGKVIKVEAHPIPEHPRP+R+RGRVALVGD+AGYVTKCSGEGIYFAAKSG
Sbjct: 292 IRERVEPKISGGKVIKVEAHPIPEHPRPVRIRGRVALVGDAAGYVTKCSGEGIYFAAKSG 351
Query: 587 RMCGEAIVNASMNGKRMINEEDLKREYLKKWDEKYITTFRFLDLLQKVFYGSNAGREALV 408
+MC EAI+ AS G RMI+EEDL+REYLK+WD KY+ T+R LDLL +VFYGSNA REALV
Sbjct: 352 KMCAEAILKASEGGLRMISEEDLRREYLKEWDGKYLVTYRLLDLLHRVFYGSNAAREALV 411
Query: 407 ELCGDEYVQKMTFDSYLYKKIAAGDRWEDVKMVFSTFGSLIRANIIGQEVEKL 249
ELCG+EYVQ+MTF+SYLYK++A GD WED KMVF+TFGSLIR I+G++V+ L
Sbjct: 412 ELCGNEYVQRMTFESYLYKRLAEGDGWEDAKMVFNTFGSLIRCKIVGRDVQAL 464
>ref|XP_002328221.1| predicted protein [Populus trichocarpa]
gi|224147708|ref|XP_002336528.1| predicted protein
[Populus trichocarpa] gi|222835866|gb|EEE74287.1|
predicted protein [Populus trichocarpa]
gi|222837736|gb|EEE76101.1| predicted protein [Populus
trichocarpa]
Length = 451
Score = 660 bits (1704), Expect = 0.0
Identities = 321/420 (76%), Positives = 371/420 (88%), Gaps = 2/420 (0%)
Frame = -3
Query: 1496 TITSNQLIHGRKLRAAVIGGGPAGSCAADALACGGIETFLIERSPAGAKPCGGAIPLCML 1317
TIT+ I GRKLRAAVIGGGPAGS AA+ALA GG+ETFL ERSP+ AKPCGGAIPLCM+
Sbjct: 33 TITATS-ISGRKLRAAVIGGGPAGSSAAEALAAGGVETFLFERSPSTAKPCGGAIPLCMI 91
Query: 1316 NEFSIPLDLIDRKVTQMKIISPSNLTVDFG-KTLKSHEYIAMLRREVLDSYLRSRAQSNG 1140
+EFSIPL L+DR VT+MKIISPSNLTVDFG +TLKSHE+I MLRREVLDS+LRSRAQSNG
Sbjct: 92 DEFSIPLHLVDRHVTRMKIISPSNLTVDFGSRTLKSHEFIPMLRREVLDSFLRSRAQSNG 151
Query: 1139 ANLVTALFTHLEVPGSIYD-PYIVHYNVNGSKHSIEADVVIGADGANSRVAISIDAGDYK 963
A+ +T L T +EVP PY++H+ +N K S+ D+++GADGANSRVA IDAG+Y
Sbjct: 152 AHFITGLVTDIEVPDFFSSKPYVIHHTINNRKQSLAVDLIVGADGANSRVAKIIDAGNYS 211
Query: 962 CAIAFQERIKLPEEKMDYYRNLAEMYVGNDISPDFYGWVFPKCDHVAVGTGTVSSKQDIK 783
CAIAFQERIKLP+EKM+YY +LAEMYVGND+SPDFY WVFPKCDHVAVGTGTV ++Q+IK
Sbjct: 212 CAIAFQERIKLPDEKMEYYHDLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTVCARQNIK 271
Query: 782 LYQRGIRDRVRKKIDGGKVIKVEAHPIPEHPRPMRVRGRVALVGDSAGYVTKCSGEGIYF 603
+YQRGIR+RVR+KI GGKVIKVEAHPIPEHPRP RVRGRVALVGD+AGYVTKCSGEGIYF
Sbjct: 272 VYQRGIRERVREKIKGGKVIKVEAHPIPEHPRPRRVRGRVALVGDAAGYVTKCSGEGIYF 331
Query: 602 AAKSGRMCGEAIVNASMNGKRMINEEDLKREYLKKWDEKYITTFRFLDLLQKVFYGSNAG 423
AAKSGRMCGEAIV AS G++MI+EEDLKREYL++WD KY+ TFRFLDLLQKVFYGS+ G
Sbjct: 332 AAKSGRMCGEAIVKASEGGEKMISEEDLKREYLREWDRKYVNTFRFLDLLQKVFYGSDVG 391
Query: 422 REALVELCGDEYVQKMTFDSYLYKKIAAGDRWEDVKMVFSTFGSLIRANIIGQEVEKLVL 243
REALVELCGDEYVQ+MTFDSYLYKK+A GDRW DVK+V +TFGSL+R ++G+E+E L L
Sbjct: 392 REALVELCGDEYVQRMTFDSYLYKKLATGDRWGDVKLVLNTFGSLMRCKVLGREMEALKL 451
>ref|XP_002312852.1| predicted protein [Populus trichocarpa] gi|222849260|gb|EEE86807.1|
predicted protein [Populus trichocarpa]
Length = 454
Score = 660 bits (1702), Expect = 0.0
Identities = 316/420 (75%), Positives = 371/420 (88%), Gaps = 2/420 (0%)
Frame = -3
Query: 1496 TITSNQLIHGRKLRAAVIGGGPAGSCAADALACGGIETFLIERSPAGAKPCGGAIPLCML 1317
T TS+ + GRKLRAAVIGGGPAGS AA+ALA GG+ETFL ERSP+ AKPCGGAIPLCM+
Sbjct: 35 TATSSSPLSGRKLRAAVIGGGPAGSSAAEALAAGGVETFLFERSPSTAKPCGGAIPLCMI 94
Query: 1316 NEFSIPLDLIDRKVTQMKIISPSNLTVDFG-KTLKSHEYIAMLRREVLDSYLRSRAQSNG 1140
+EFSIPL LIDR VT+MKIISPSNLTVDFG KTLKSHE+I MLRREVLDS+LRSRAQSNG
Sbjct: 95 DEFSIPLHLIDRHVTRMKIISPSNLTVDFGSKTLKSHEFIPMLRREVLDSFLRSRAQSNG 154
Query: 1139 ANLVTALFTHLEVPGSIYD-PYIVHYNVNGSKHSIEADVVIGADGANSRVAISIDAGDYK 963
A +T L T +EVP + PY++H+ +N K S+ D+++GADGANSRVA I+AG+Y+
Sbjct: 155 AQFITGLVTDIEVPDFLSSKPYVIHHTINNCKRSLAVDLIVGADGANSRVAKIINAGNYR 214
Query: 962 CAIAFQERIKLPEEKMDYYRNLAEMYVGNDISPDFYGWVFPKCDHVAVGTGTVSSKQDIK 783
CAIAFQERIKLP+EKM+YY NLAEMYVGND+SPDFY WVFPKCDHVAVGTGT +++DIK
Sbjct: 215 CAIAFQERIKLPDEKMEYYHNLAEMYVGNDVSPDFYAWVFPKCDHVAVGTGTACARRDIK 274
Query: 782 LYQRGIRDRVRKKIDGGKVIKVEAHPIPEHPRPMRVRGRVALVGDSAGYVTKCSGEGIYF 603
+YQRGIR+RV++KI GG+VIKVEAHPIPE PRP RVRGRVALVGD+AGYVTKCSGEGIYF
Sbjct: 275 VYQRGIRERVKEKIKGGRVIKVEAHPIPEQPRPRRVRGRVALVGDAAGYVTKCSGEGIYF 334
Query: 602 AAKSGRMCGEAIVNASMNGKRMINEEDLKREYLKKWDEKYITTFRFLDLLQKVFYGSNAG 423
AAKSGRMCGEAIV AS G+RM++EEDL+REYL++WD KY+ TFRFLDLLQ+VFYGSN G
Sbjct: 335 AAKSGRMCGEAIVKASEGGERMVSEEDLRREYLREWDNKYVNTFRFLDLLQRVFYGSNVG 394
Query: 422 REALVELCGDEYVQKMTFDSYLYKKIAAGDRWEDVKMVFSTFGSLIRANIIGQEVEKLVL 243
REALVELCGDEYVQ+MTFDSYLYKK+A+GDRW+DVK+V +TFGS +R ++G+E+E L L
Sbjct: 395 REALVELCGDEYVQRMTFDSYLYKKMASGDRWDDVKLVLNTFGSFMRCKVVGREMEALKL 454
>ref|XP_002521639.1| geranylgeranyl hydrogenase, putative [Ricinus communis]
gi|223539151|gb|EEF40746.1| geranylgeranyl hydrogenase,
putative [Ricinus communis]
Length = 451
Score = 650 bits (1678), Expect = 0.0
Identities = 316/418 (75%), Positives = 366/418 (87%), Gaps = 2/418 (0%)
Frame = -3
Query: 1496 TITSNQLIHGRKLRAAVIGGGPAGSCAADALACGGIETFLIERSPAGAKPCGGAIPLCML 1317
T++ I GRKLRAAVIGGGPAGS AA+ALA GGIETFL ERS + AKPCGGAIPLCML
Sbjct: 32 TLSITSAISGRKLRAAVIGGGPAGSSAAEALAAGGIETFLFERSTSTAKPCGGAIPLCML 91
Query: 1316 NEFSIPLDLIDRKVTQMKIISPSNLTVDFG-KTLKSHEYIAMLRREVLDSYLRSRAQSNG 1140
+EF+IPL+LIDR VT+MKI+SPSNLTVDFG KTLK HE I MLRREVLDS+LRSR QS G
Sbjct: 92 DEFNIPLNLIDRHVTRMKIVSPSNLTVDFGSKTLKPHESIPMLRREVLDSFLRSRVQSKG 151
Query: 1139 ANLVTALFTHLEVPGSIYDPYIVHYNVNGS-KHSIEADVVIGADGANSRVAISIDAGDYK 963
A L+ L H+++P +PYI+H+ +N + K + DVVIGADGANSRVA SI+AG+Y
Sbjct: 152 ATLIQGLVMHIDIPSLPKEPYIIHHIINNNIKGELAVDVVIGADGANSRVAKSINAGNYS 211
Query: 962 CAIAFQERIKLPEEKMDYYRNLAEMYVGNDISPDFYGWVFPKCDHVAVGTGTVSSKQDIK 783
CAIAFQERI+LP++KM+YY++LAEMYVG+D+SPDFY WVFPKCDHVAVGTGTV SKQ+IK
Sbjct: 212 CAIAFQERIRLPDDKMEYYKDLAEMYVGDDVSPDFYAWVFPKCDHVAVGTGTVCSKQNIK 271
Query: 782 LYQRGIRDRVRKKIDGGKVIKVEAHPIPEHPRPMRVRGRVALVGDSAGYVTKCSGEGIYF 603
++QRGIR+RVR KI GGKVIKVEAHPIPEHPRP RVRGRVALVGD+AGYVTKCSGEGIYF
Sbjct: 272 VFQRGIRERVRDKIKGGKVIKVEAHPIPEHPRPTRVRGRVALVGDAAGYVTKCSGEGIYF 331
Query: 602 AAKSGRMCGEAIVNASMNGKRMINEEDLKREYLKKWDEKYITTFRFLDLLQKVFYGSNAG 423
AAKSGRMCGE IV AS G++M++EEDLKREYL++WD KY+ TFRFLDLLQ+VFYGSN G
Sbjct: 332 AAKSGRMCGEGIVKASEGGEKMVSEEDLKREYLREWDNKYVNTFRFLDLLQRVFYGSNVG 391
Query: 422 REALVELCGDEYVQKMTFDSYLYKKIAAGDRWEDVKMVFSTFGSLIRANIIGQEVEKL 249
REALVELCGDEYVQ+MTFDSYLYKK+A GDRWEDVKMV +TFGSL+R I+G+E+E L
Sbjct: 392 REALVELCGDEYVQRMTFDSYLYKKLAGGDRWEDVKMVLNTFGSLVRCRIVGREMEGL 449
>ref|XP_003519480.1| PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like
[Glycine max]
Length = 448
Score = 615 bits (1585), Expect = e-173
Identities = 305/421 (72%), Positives = 350/421 (83%), Gaps = 2/421 (0%)
Frame = -3
Query: 1499 FTITSNQLIHGRKLRAAVIGGGPAGSCAADALACGGIETFLIERSPAG-AKPCGGAIPLC 1323
FTI +++ I GRKLRAAVIGGGPAGS AA+ALA GG+ETFL ER+P AKPCGGAIPLC
Sbjct: 28 FTIKASKSISGRKLRAAVIGGGPAGSSAAEALASGGVETFLFERNPPSVAKPCGGAIPLC 87
Query: 1322 MLNEFSIPLDLIDRKVTQMKIISPSNLTVDFGKTLKSHEYIAMLRREVLDSYLRSRAQSN 1143
ML EF IP LIDR VT M+I SPSN+ VDFGKTLK HE+IAMLRREVLDS+LRSRA +
Sbjct: 88 MLEEFDIPNHLIDRHVTHMRIFSPSNIAVDFGKTLKPHEFIAMLRREVLDSFLRSRAHAA 147
Query: 1142 GANLVTALFTHLEVPGSIYDPYIVHYNVNGS-KHSIEADVVIGADGANSRVAISIDAGDY 966
GA ++ L T L++P S PY VHY NGS + S+ DVVIGADGANSRVA +I AGDY
Sbjct: 148 GATAISGLVTALDLPASPDAPYTVHYTANGSSRRSLAVDVVIGADGANSRVAKAIGAGDY 207
Query: 965 KCAIAFQERIKLPEEKMDYYRNLAEMYVGNDISPDFYGWVFPKCDHVAVGTGTVSSKQDI 786
CAIAFQERIKLP+EKM YY NLAEMYVG+D+SPDFY WVFPKCDHVAVGTGTV SK+DI
Sbjct: 208 ACAIAFQERIKLPDEKMAYYENLAEMYVGDDVSPDFYAWVFPKCDHVAVGTGTVRSKKDI 267
Query: 785 KLYQRGIRDRVRKKIDGGKVIKVEAHPIPEHPRPMRVRGRVALVGDSAGYVTKCSGEGIY 606
KLYQRGIR+RV+ KI+GGKVIKVEAHPIPEHPRP+RVRGRVALVGD+AGYVTKCSGEGIY
Sbjct: 268 KLYQRGIRERVKPKINGGKVIKVEAHPIPEHPRPVRVRGRVALVGDAAGYVTKCSGEGIY 327
Query: 605 FAAKSGRMCGEAIVNASMNGKRMINEEDLKREYLKKWDEKYITTFRFLDLLQKVFYGSNA 426
FAAKSGR+CG +V AS G RMI+E DL+REYLK WD +Y TFRFLDLLQ+VFYGSNA
Sbjct: 328 FAAKSGRVCGNGVVRASEGGDRMIDECDLRREYLKPWDAEYANTFRFLDLLQRVFYGSNA 387
Query: 425 GREALVELCGDEYVQKMTFDSYLYKKIAAGDRWEDVKMVFSTFGSLIRANIIGQEVEKLV 246
REALVELCGDEYVQ+MTF+SYLYKK+A G + K+ +T GSL+R+ ++ +E +
Sbjct: 388 CREALVELCGDEYVQRMTFESYLYKKLARGRVLDHAKLFMNTLGSLVRSKVVQTSMESFI 447
Query: 245 L 243
L
Sbjct: 448 L 448