BLASTX nr result

ID: Coptis24_contig00005021 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005021
         (1048 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272916.1| PREDICTED: 60S ribosomal protein L7-1 [Vitis...   296   6e-78
ref|XP_004148505.1| PREDICTED: 60S ribosomal protein L7-1-like [...   274   2e-71
gb|ACF06597.1| 60S ribosomal protein L7-like protein [Elaeis gui...   264   3e-68
gb|ABC01902.1| putative 60S ribosomal protein L7-like protein [S...   260   3e-67
ref|XP_002527311.1| 60S ribosomal protein L7, putative [Ricinus ...   258   2e-66

>ref|XP_002272916.1| PREDICTED: 60S ribosomal protein L7-1 [Vitis vinifera]
           gi|297745096|emb|CBI38935.3| unnamed protein product
           [Vitis vinifera]
          Length = 246

 Score =  296 bits (758), Expect = 6e-78
 Identities = 148/251 (58%), Positives = 182/251 (72%)
 Frame = +2

Query: 38  MAEGEGKQQQLAYVPEIILKKRKSNDEWAIKRRERFXXXXXXXXXXXXXVFKRAEQFIQE 217
           MA+ E K   L Y+PE+ILKKRKSN+EWAIKRR++                K AEQ+IQE
Sbjct: 1   MADEEPKP--LTYIPEVILKKRKSNEEWAIKRRQQLEERNLRSKQNKAFNLKTAEQYIQE 58

Query: 218 YRTKELDFVNMKQRRRLGXXXXXXXXXXXXLIFIIRIRSTNNAMHSKAKKILHRLRLTRV 397
           YR +ELD + MK R +              L+F+IRI+  N+ MH K +KIL+ LRL ++
Sbjct: 59  YRNRELDLIQMKHRGK--KRKLSLETLDSKLLFVIRIQGKND-MHPKTRKILYFLRLRKI 115

Query: 398 FSGVFVKANEGLMDMLRMVEPFVTYGYPNLKSVKELVFKKGFLNINKQSVPLTDNNIIEQ 577
           F GV VKANEG+++ML+ VEP+V YGYPNLK+V+EL++KKGF  I  Q VPLTDNNIIEQ
Sbjct: 116 FDGVLVKANEGILEMLQKVEPYVAYGYPNLKNVRELIYKKGFAKIEGQKVPLTDNNIIEQ 175

Query: 578 ELGKHGVLCIEDIVHEIASAGPHFKDVTSVLWPFKLNRPEGGLQGKKKPFKDGGDAGNRE 757
            LGKHG++CIEDIVHEIA+ GPHFK+V S LWPF LN+PEGG QGKKK FK+GGDAGNR 
Sbjct: 176 ALGKHGIMCIEDIVHEIANVGPHFKEVNSFLWPFTLNKPEGGFQGKKKLFKEGGDAGNRG 235

Query: 758 DSINDLINMMN 790
           D IN+LI  MN
Sbjct: 236 DKINELIGKMN 246


>ref|XP_004148505.1| PREDICTED: 60S ribosomal protein L7-1-like [Cucumis sativus]
           gi|449530031|ref|XP_004172000.1| PREDICTED: 60S
           ribosomal protein L7-1-like [Cucumis sativus]
           gi|449532976|ref|XP_004173453.1| PREDICTED: 60S
           ribosomal protein L7-1-like [Cucumis sativus]
          Length = 249

 Score =  274 bits (701), Expect = 2e-71
 Identities = 140/252 (55%), Positives = 178/252 (70%), Gaps = 1/252 (0%)
 Frame = +2

Query: 38  MAEGEGKQQQLAYVPEIILKKRKSNDEWAIKRRERFXXXXXXXXXXXXXVFKRAEQFIQE 217
           MA  E   + LAY+PEIILKKRK N+  A++R+E+                K  E+F++E
Sbjct: 1   MAMAEEDPKPLAYIPEIILKKRKVNEAAALRRKEQLELRKLSSKKNKDGFIKLPEEFVRE 60

Query: 218 YRTKELDFVNMKQRRRLGXXXXXXXXXXXXLIFIIRIRSTNNAMHSKAKKILHRLRLTRV 397
           YR +ELD V MK R  +             LIFIIRI+  N+ MH K +KIL+ L L+R+
Sbjct: 61  YRARELDLVKMKHR--IKRKRSAIVPSTSKLIFIIRIQGKND-MHPKTRKILYSLGLSRI 117

Query: 398 FSGVFVKANEGLMDMLRMVEPFVTYGYPNLKSVKELVFKKGFLNINKQSVPLTDNNIIEQ 577
           FS VF KANE ++  L+ VEP+VTYGYPNLK+V+EL++KKGF  I+KQ VPLTDNNIIEQ
Sbjct: 118 FSAVFAKANESILGKLQRVEPYVTYGYPNLKNVRELIYKKGFAKIDKQRVPLTDNNIIEQ 177

Query: 578 ELGKHGVLCIEDIVHEIASAGPHFKDVTSVLWPFKLNRPEGG-LQGKKKPFKDGGDAGNR 754
            LGKHG++C+ED+VHEIA+ GPHFK+V S LWPF+L +P G  LQGKK  +K+GGD+GNR
Sbjct: 178 ALGKHGIVCMEDMVHEIANVGPHFKEVISFLWPFELEKPGGRCLQGKKSSYKEGGDSGNR 237

Query: 755 EDSINDLINMMN 790
           ED INDLIN MN
Sbjct: 238 EDDINDLINEMN 249


>gb|ACF06597.1| 60S ribosomal protein L7-like protein [Elaeis guineensis]
          Length = 246

 Score =  264 bits (674), Expect = 3e-68
 Identities = 132/247 (53%), Positives = 173/247 (70%)
 Frame = +2

Query: 50  EGKQQQLAYVPEIILKKRKSNDEWAIKRRERFXXXXXXXXXXXXXVFKRAEQFIQEYRTK 229
           E + Q LAYV E +LKKRK+N+EWAIKRR++                +R E+F++EYR K
Sbjct: 3   EEESQPLAYVHETVLKKRKNNEEWAIKRRDQLDARKKRKKEDLKLAIRRPEEFVKEYRDK 62

Query: 230 ELDFVNMKQRRRLGXXXXXXXXXXXXLIFIIRIRSTNNAMHSKAKKILHRLRLTRVFSGV 409
           ELD + MKQR  L             L+F+IRIR + + MH + +KIL+ LRL  + SGV
Sbjct: 63  ELDLIRMKQR--LKRRKLFSDNIKSDLLFVIRIRGSKD-MHPRTRKILNLLRLRHILSGV 119

Query: 410 FVKANEGLMDMLRMVEPFVTYGYPNLKSVKELVFKKGFLNINKQSVPLTDNNIIEQELGK 589
           FVK NE  + ML  VEPF+TYGYP+LK+V+EL++KKG   I+KQS PLT+NN+IEQ LGK
Sbjct: 120 FVKTNEATLKMLLSVEPFITYGYPSLKNVRELIYKKGCGMIDKQSAPLTNNNVIEQALGK 179

Query: 590 HGVLCIEDIVHEIASAGPHFKDVTSVLWPFKLNRPEGGLQGKKKPFKDGGDAGNREDSIN 769
           +G++CIEDIVHEIA+ G HFK+VT  LWPF+L  PE      KKP+KDGGD+GN E+SIN
Sbjct: 180 YGIICIEDIVHEIATVGSHFKEVTKFLWPFRLKAPERRPLLTKKPYKDGGDSGNHEESIN 239

Query: 770 DLINMMN 790
           +LI+ +N
Sbjct: 240 ELIDKLN 246


>gb|ABC01902.1| putative 60S ribosomal protein L7-like protein [Solanum tuberosum]
          Length = 246

 Score =  260 bits (665), Expect = 3e-67
 Identities = 132/243 (54%), Positives = 174/243 (71%)
 Frame = +2

Query: 62  QQLAYVPEIILKKRKSNDEWAIKRRERFXXXXXXXXXXXXXVFKRAEQFIQEYRTKELDF 241
           Q L Y+PE+ILKKRK+N+EWAI+R+ +              V K+ EQFI+EYR KE+D 
Sbjct: 7   QPLNYIPEVILKKRKNNEEWAIRRKLQLEQKVRKLKSDSF-VIKKPEQFIREYRDKEMDL 65

Query: 242 VNMKQRRRLGXXXXXXXXXXXXLIFIIRIRSTNNAMHSKAKKILHRLRLTRVFSGVFVKA 421
           V MKQR +              L+F+IRI   ++ MH + +K L+ LRL ++FSGVFVKA
Sbjct: 66  VQMKQRGKR-RAKGALTTSDSKLLFVIRIGGKSD-MHPRTRKALYSLRLRKIFSGVFVKA 123

Query: 422 NEGLMDMLRMVEPFVTYGYPNLKSVKELVFKKGFLNINKQSVPLTDNNIIEQELGKHGVL 601
           NE  +++L+ VEPFVTYGYPNLKSVK+L++KKG    + Q VPLT N+I+EQ LG++G++
Sbjct: 124 NERTVEILQKVEPFVTYGYPNLKSVKDLIYKKGSGKTDNQRVPLTSNDIVEQTLGQYGII 183

Query: 602 CIEDIVHEIASAGPHFKDVTSVLWPFKLNRPEGGLQGKKKPFKDGGDAGNREDSINDLIN 781
           C+ED+V EIAS GPHFK+VTS L PF L +PE  LQGKKK + DGGD+GNRED IN+LI+
Sbjct: 184 CLEDVVREIASVGPHFKEVTSFLCPFALTKPEKALQGKKKRYNDGGDSGNREDHINELIS 243

Query: 782 MMN 790
            MN
Sbjct: 244 KMN 246


>ref|XP_002527311.1| 60S ribosomal protein L7, putative [Ricinus communis]
           gi|223533311|gb|EEF35063.1| 60S ribosomal protein L7,
           putative [Ricinus communis]
          Length = 247

 Score =  258 bits (658), Expect = 2e-66
 Identities = 136/252 (53%), Positives = 174/252 (69%), Gaps = 1/252 (0%)
 Frame = +2

Query: 38  MAEGEGKQQQLAYVPEIILKKRKSNDE-WAIKRRERFXXXXXXXXXXXXXVFKRAEQFIQ 214
           MAE E K   +A++ EI+LKKRK  +E  A+ R+ +                KR EQFI+
Sbjct: 1   MAEEESKP--MAFISEIVLKKRKHKEESLALTRKTQLESGKSRGQKRKFDDIKRPEQFIK 58

Query: 215 EYRTKELDFVNMKQRRRLGXXXXXXXXXXXXLIFIIRIRSTNNAMHSKAKKILHRLRLTR 394
           ++R KELDF+ MKQR +              L+FI+RI    NAMH + +KIL+ L+L R
Sbjct: 59  DFRDKELDFIRMKQRAK--KPKSASLTPKSKLMFIVRIPG-KNAMHPRTRKILYNLKLLR 115

Query: 395 VFSGVFVKANEGLMDMLRMVEPFVTYGYPNLKSVKELVFKKGFLNINKQSVPLTDNNIIE 574
            F GVFVKA+ GL++ L+ VEP+VT+GYPNLK+V EL+ KKG+  +N Q VPL DNNI+E
Sbjct: 116 NFHGVFVKASAGLLEKLQRVEPYVTFGYPNLKNVTELIRKKGYGMLNNQRVPLIDNNIVE 175

Query: 575 QELGKHGVLCIEDIVHEIASAGPHFKDVTSVLWPFKLNRPEGGLQGKKKPFKDGGDAGNR 754
           Q LGK G+LC+EDI+HEIA+ GPHFKDV S L PF L++P+GGLQGKK  FKDGGD GNR
Sbjct: 176 QALGKFGILCLEDIIHEIANVGPHFKDVNSFLGPFALSKPKGGLQGKKALFKDGGDTGNR 235

Query: 755 EDSINDLINMMN 790
           ED INDLI+ MN
Sbjct: 236 EDKINDLIDKMN 247


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