BLASTX nr result

ID: Coptis24_contig00005012 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005012
         (1372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316142.1| predicted protein [Populus trichocarpa] gi|2...   481   e-133
ref|XP_002454836.1| hypothetical protein SORBIDRAFT_04g038260 [S...   421   e-115
gb|AFW63885.1| zn-dependent hydrolase, including glyoxylase [Zea...   416   e-114
ref|NP_001152706.1| LOC100286347 [Zea mays] gi|195659199|gb|ACG4...   416   e-114
gb|EEC69785.1| hypothetical protein OsI_00069 [Oryza sativa Indi...   410   e-112

>ref|XP_002316142.1| predicted protein [Populus trichocarpa] gi|222865182|gb|EEF02313.1|
            predicted protein [Populus trichocarpa]
          Length = 353

 Score =  481 bits (1238), Expect = e-133
 Identities = 223/325 (68%), Positives = 265/325 (81%), Gaps = 8/325 (2%)
 Frame = +2

Query: 122  FCGVTRNSSAQKLGNILTIRAIQT--------PKQTVRNKEREKRPQNVQGDFFVDHTCI 277
            F G  R ++  K G +  IRAIQ+        P  T     R +RPQN++GDFFVDHTCI
Sbjct: 21   FSGQRRLNANSKGGKVSVIRAIQSQEEAAAAGPTSTRYQARRTRRPQNIEGDFFVDHTCI 80

Query: 278  DCDTCRWMAPQIFTRVDEKSAVFKQPDSEEERMSALQALLSCPTSSIHTEKPPHDILEVQ 457
            DCDTCRWMAPQ+FTR+ E SAVFKQP S EER+ ALQALLSCPTSSIHTEKP  DIL+ Q
Sbjct: 81   DCDTCRWMAPQVFTRIGEMSAVFKQPTSGEERLKALQALLSCPTSSIHTEKPASDILQAQ 140

Query: 458  KTFPLPIDEQRIPGVFHCGYHSERSYGATSYFIVHPQGNILVDSPRYTEKLAHNIEMLGG 637
            KTFP PID+QRIPGV+HCGYHSE+SYGA S+ IVHP+GNI++DSPRYTE+LA NIEMLGG
Sbjct: 141  KTFPTPIDQQRIPGVYHCGYHSEKSYGAASFLIVHPEGNIIIDSPRYTERLARNIEMLGG 200

Query: 638  ARYMFLTHSDDVADHEKWSKRLSCDRIIHLKEVDGYTADVEMKLDGSGPWSLSKDIELIH 817
            ARYMFLTH DDVADH KWS+RLSCDRI+H  +VD  TADVE KL G+GPW+L +D++LIH
Sbjct: 201  ARYMFLTHEDDVADHRKWSERLSCDRILHSVDVDNSTADVETKLQGTGPWNLGRDVQLIH 260

Query: 818  TPGHTEGSVCLFYKPLRILFTGDHLCEELNELSIVERYNRCSVPIQVSSVRKLLSLDFEW 997
            TPGHTEGS+CLFYKPL+ILFTGDHL      LSI ERYN+CSVP+Q+ SV KLL +DF W
Sbjct: 261  TPGHTEGSICLFYKPLKILFTGDHLLMTETGLSICERYNKCSVPMQIDSVLKLLEIDFNW 320

Query: 998  ILPGHGRRVQYRNKEMKNSSLEAFL 1072
            I+PGHGRRV+++++E K+S L+AF+
Sbjct: 321  IIPGHGRRVEFKDREEKDSILKAFV 345


>ref|XP_002454836.1| hypothetical protein SORBIDRAFT_04g038260 [Sorghum bicolor]
            gi|241934667|gb|EES07812.1| hypothetical protein
            SORBIDRAFT_04g038260 [Sorghum bicolor]
          Length = 332

 Score =  421 bits (1082), Expect = e-115
 Identities = 194/305 (63%), Positives = 246/305 (80%), Gaps = 2/305 (0%)
 Frame = +2

Query: 167  ILTIRAIQTPKQTVRNKEREKRPQNVQGDFFVDHTCIDCDTCRWMAPQIFTRVDEKSAVF 346
            IL+ RA  +P       +R +RPQNV GDFFVD  CIDC TCRWMAPQ+F RVD K+AV 
Sbjct: 28   ILSFRAAASPAAL----DRRRRPQNVAGDFFVDQRCIDCQTCRWMAPQVFKRVDGKAAVA 83

Query: 347  KQPDSEEERMSALQALLSCPTSSIHTEKPPHDILEVQKTFPLPIDEQRIPGVFHCGYHSE 526
             QP SEEER  ALQALLSCPTSSIHTEKPP DIL+VQ  FPLPID++ +PGV+ CGY+SE
Sbjct: 84   AQPSSEEERTKALQALLSCPTSSIHTEKPPKDILQVQNMFPLPIDDKLLPGVYLCGYNSE 143

Query: 527  RSYGATSYFIVHPQGNILVDSPRYTEKLAHNIEMLGGARYMFLTHSDDVADHEKWSKRLS 706
             SYGATSY ++HPQGNIL+DSPRYT KLA+NIE LGGARYMFLTH DDVADH KW+++L 
Sbjct: 144  DSYGATSYLVIHPQGNILIDSPRYTSKLANNIEKLGGARYMFLTHIDDVADHRKWAEQLK 203

Query: 707  CDRIIHLKEVDGYTADVEMKLDGSGPWSLSKDIELIHTPGHTEGSVCLFYKPLRILFTGD 886
            C+RIIH+ +V+  TADVE KL+G+GPW++  D E IHTPGHT GSVCL+YKP ++LFTGD
Sbjct: 204  CERIIHMGDVEEATADVEWKLEGNGPWNIGTDFEFIHTPGHTPGSVCLYYKPPKVLFTGD 263

Query: 887  HLC--EELNELSIVERYNRCSVPIQVSSVRKLLSLDFEWILPGHGRRVQYRNKEMKNSSL 1060
            H+   EE ++L++   Y++ SV +Q+ S+RKLL ++FEW+LPGHG R++Y++ + KN+++
Sbjct: 264  HVAKSEESDDLNLFLMYSKQSVSLQLESIRKLLEVEFEWLLPGHGYRIRYKDVQAKNAAM 323

Query: 1061 EAFLA 1075
            E+ LA
Sbjct: 324  ESLLA 328


>gb|AFW63885.1| zn-dependent hydrolase, including glyoxylase [Zea mays]
          Length = 328

 Score =  416 bits (1070), Expect = e-114
 Identities = 190/288 (65%), Positives = 238/288 (82%), Gaps = 2/288 (0%)
 Frame = +2

Query: 218  EREKRPQNVQGDFFVDHTCIDCDTCRWMAPQIFTRVDEKSAVFKQPDSEEERMSALQALL 397
            +R +RP NV GDFFVDH CIDC TCRWMAP++F RVD K+AV  QP SEEER  ALQALL
Sbjct: 37   DRRRRPHNVAGDFFVDHRCIDCQTCRWMAPEVFKRVDGKAAVAAQPSSEEERTKALQALL 96

Query: 398  SCPTSSIHTEKPPHDILEVQKTFPLPIDEQRIPGVFHCGYHSERSYGATSYFIVHPQGNI 577
            SCPTSSIHTEKPP DIL+VQ  FPLPID++ +PGV+ CGY+SE SYGATSY ++HPQGNI
Sbjct: 97   SCPTSSIHTEKPPKDILKVQNMFPLPIDDKLLPGVYLCGYNSEDSYGATSYLVIHPQGNI 156

Query: 578  LVDSPRYTEKLAHNIEMLGGARYMFLTHSDDVADHEKWSKRLSCDRIIHLKEVDGYTADV 757
            L+DSPRYT KLA+NIE LGGARYMFLTH DDVADH KW+++L C+RIIH  +V+  TADV
Sbjct: 157  LIDSPRYTPKLANNIEKLGGARYMFLTHIDDVADHRKWAEQLKCERIIHSGDVEEATADV 216

Query: 758  EMKLDGSGPWSLSKDIELIHTPGHTEGSVCLFYKPLRILFTGDHLC--EELNELSIVERY 931
            E KL+G+GPW+L  D ELI+TPGHT GSVCL++KPL++LFTGDH+   EE ++L++   Y
Sbjct: 217  EWKLEGNGPWNLGTDFELINTPGHTPGSVCLYFKPLKVLFTGDHVAKSEESDDLNLFLMY 276

Query: 932  NRCSVPIQVSSVRKLLSLDFEWILPGHGRRVQYRNKEMKNSSLEAFLA 1075
            ++ SV +Q+ S+RKLL L+FEW+LPGHG R++Y++   KN ++E+ LA
Sbjct: 277  SKQSVSLQLESIRKLLELEFEWLLPGHGYRIKYKDVRAKNVAMESLLA 324


>ref|NP_001152706.1| LOC100286347 [Zea mays] gi|195659199|gb|ACG49067.1| Zn-dependent
            hydrolases, including glyoxylases [Zea mays]
          Length = 328

 Score =  416 bits (1069), Expect = e-114
 Identities = 190/288 (65%), Positives = 237/288 (82%), Gaps = 2/288 (0%)
 Frame = +2

Query: 218  EREKRPQNVQGDFFVDHTCIDCDTCRWMAPQIFTRVDEKSAVFKQPDSEEERMSALQALL 397
            +R +RP NV GDFFVDH CIDC TCRWMAP++F RVD K+AV  QP SEEER  ALQALL
Sbjct: 37   DRRRRPHNVAGDFFVDHRCIDCQTCRWMAPEVFKRVDGKAAVAAQPSSEEERTKALQALL 96

Query: 398  SCPTSSIHTEKPPHDILEVQKTFPLPIDEQRIPGVFHCGYHSERSYGATSYFIVHPQGNI 577
            SCPTSSIHTEKPP DIL+VQ  FPLPID++ +PGV+ CGY+SE SY ATSY ++HPQGNI
Sbjct: 97   SCPTSSIHTEKPPKDILKVQNMFPLPIDDKLLPGVYLCGYNSEDSYRATSYLVIHPQGNI 156

Query: 578  LVDSPRYTEKLAHNIEMLGGARYMFLTHSDDVADHEKWSKRLSCDRIIHLKEVDGYTADV 757
            L+DSPRYT KLA+NIE LGGARYMFLTH DDVADH KW+++L C+RIIH  +V+  TADV
Sbjct: 157  LIDSPRYTPKLANNIEKLGGARYMFLTHIDDVADHRKWAEQLKCERIIHSGDVEEATADV 216

Query: 758  EMKLDGSGPWSLSKDIELIHTPGHTEGSVCLFYKPLRILFTGDHLC--EELNELSIVERY 931
            E KL+G+GPW+L  D ELIHTPGHT GSVCL++KPL++LFTGDH+   EE ++L++   Y
Sbjct: 217  EWKLEGNGPWNLGTDFELIHTPGHTPGSVCLYFKPLKVLFTGDHVAKSEESDDLNLFLMY 276

Query: 932  NRCSVPIQVSSVRKLLSLDFEWILPGHGRRVQYRNKEMKNSSLEAFLA 1075
            ++ SV +Q+ S+RKLL L+FEW+LPGHG R++Y++   KN ++E+ LA
Sbjct: 277  SKQSVSLQLESIRKLLELEFEWLLPGHGYRIKYKDVRAKNVAMESLLA 324


>gb|EEC69785.1| hypothetical protein OsI_00069 [Oryza sativa Indica Group]
          Length = 326

 Score =  410 bits (1053), Expect = e-112
 Identities = 190/287 (66%), Positives = 227/287 (79%), Gaps = 2/287 (0%)
 Frame = +2

Query: 221  REKRPQNVQGDFFVDHTCIDCDTCRWMAPQIFTRVDEKSAVFKQPDSEEERMSALQALLS 400
            + +RPQNV GDFFVDH CIDC TCRWMAP++F RVD K+AV  QP S+E R  ALQALLS
Sbjct: 36   QRRRPQNVPGDFFVDHRCIDCQTCRWMAPEVFKRVDGKAAVAAQPISDEHRTKALQALLS 95

Query: 401  CPTSSIHTEKPPHDILEVQKTFPLPIDEQRIPGVFHCGYHSERSYGATSYFIVHPQGNIL 580
            CPTSSIHTEKP  DIL+VQ  FPLPID   +PGV+ CGYHS+ SYGATSY + HP GNIL
Sbjct: 96   CPTSSIHTEKPAKDILQVQNMFPLPIDNHLLPGVYLCGYHSQDSYGATSYLLTHPDGNIL 155

Query: 581  VDSPRYTEKLAHNIEMLGGARYMFLTHSDDVADHEKWSKRLSCDRIIHLKEVDGYTADVE 760
            VDSPRYT KLA NIE LGGARYMFLTH DDVADH KW++RL C+RIIH  +V+  TADVE
Sbjct: 156  VDSPRYTTKLAENIEKLGGARYMFLTHMDDVADHRKWAERLKCERIIHSGDVEDVTADVE 215

Query: 761  MKLDGSGPWSLSKDIELIHTPGHTEGSVCLFYKPLRILFTGDHLC--EELNELSIVERYN 934
             KL G+GPW +  D ELIHTPGHTEGSVCLFYKP++ LFTGDH+   EE ++L +   Y+
Sbjct: 216  WKLTGNGPWDIGADFELIHTPGHTEGSVCLFYKPVKALFTGDHVAKSEESDDLDLFLMYS 275

Query: 935  RCSVPIQVSSVRKLLSLDFEWILPGHGRRVQYRNKEMKNSSLEAFLA 1075
            + SV +Q+ S+RKLL LDFEW LPGHG R+ Y++   K+S++E+ +A
Sbjct: 276  KQSVGLQLDSMRKLLKLDFEWFLPGHGYRIHYKDVRAKDSAIESLIA 322


Top