BLASTX nr result

ID: Coptis24_contig00005011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005011
         (1886 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83660.1| hypothetical protein VITISV_006539 [Vitis vinifera]   589   e-165
ref|XP_002276883.2| PREDICTED: protein IWS1 homolog [Vitis vinif...   588   e-165
ref|XP_004136208.1| PREDICTED: IWS1-like protein-like [Cucumis s...   523   e-146
ref|XP_002519849.1| Transcription factor IWS1, putative [Ricinus...   501   e-139
ref|XP_002303442.1| predicted protein [Populus trichocarpa] gi|2...   493   e-137

>emb|CAN83660.1| hypothetical protein VITISV_006539 [Vitis vinifera]
          Length = 508

 Score =  589 bits (1518), Expect = e-165
 Identities = 322/508 (63%), Positives = 363/508 (71%), Gaps = 16/508 (3%)
 Frame = +3

Query: 171  MGYD-DPYRDEDGEPLMDPDEVPSERE----------DSIEPEDLDWRN-ERTPTPVHDS 314
            MGY+ DPYRDEDGEPLMD DEV S+RE          D  +  D DWR  ER+PTPV+  
Sbjct: 1    MGYENDPYRDEDGEPLMDFDEVQSDREVEDQGHLLQDDIPDXNDDDWRRRERSPTPVYGD 60

Query: 315  DSGKAAAPKPRKRLVKKSFKDATPSYXXXXXXXXXXXFNYS---DDDVAEAWXXXXXXXX 485
            DSG + + KPRKRLVKKS K +   Y           F      DD + +          
Sbjct: 61   DSGFSKS-KPRKRLVKKSAKXSPLHYPGIDEDDSPAAFQGDVDEDDFLRKRKDIDSGSKR 119

Query: 486  XXXXXXXXXXDRXXXXXXXXXXXXXXXXXXXXDPEMKEMWDTIAGGDSEDDKEGVRTLDD 665
                      D+                    D E+KE+WDTIAGGDSEDD EG RT+DD
Sbjct: 120  KEKKLRLEKKDKGFKSGLKKGMFEAVPRIQDGDAEVKELWDTIAGGDSEDDHEGPRTVDD 179

Query: 666  DNFIDDSGVDPADRYGSDNELGFARDAPQAXXXXXXXXXXXLFNSGKRKRKNEKSAAEIA 845
            DNFIDD+GVDPADRYGSD E     DAPQA           LF  GK+K+KNEKSAAEIA
Sbjct: 180  DNFIDDTGVDPADRYGSDREARSPGDAPQAEEGEEDEEIKQLFKMGKKKKKNEKSAAEIA 239

Query: 846  LLVEQLMAELEVTAEEDAELNRQSKPAVNKLKKLPLLTEVLSKRQLQLEFLDHGVLALLK 1025
            LLVE +MAELEVTAEEDAELNRQSKPA+NKLKKLPLLTEVLSK+QLQ EFLDHGVL LLK
Sbjct: 240  LLVENVMAELEVTAEEDAELNRQSKPAINKLKKLPLLTEVLSKKQLQQEFLDHGVLTLLK 299

Query: 1026 NWLEPLPDGSLPNISIRTAILKILTDYPIDLEQYDRRDQLKKSGLGKVIMFLSRSDEETT 1205
            NWLEPLPDGSLPNI+IR AIL+ILTD+PIDLEQYDRR+QLKKSGLGKVIMFLS+SDEETT
Sbjct: 300  NWLEPLPDGSLPNINIRAAILRILTDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEETT 359

Query: 1206 ANRRLAKDLVDKWSRPIFNKSTRFEDMRSADEERVPYKKPS-KRSATKAAGLESRDDDLD 1382
            ANR+LAKDLVDKWSRPIFNKSTRFEDMR+ D+ERVP+++PS K+   KAAG+ESRDDDLD
Sbjct: 360  ANRKLAKDLVDKWSRPIFNKSTRFEDMRNFDDERVPFRRPSAKKPMNKAAGMESRDDDLD 419

Query: 1383 LAEFSQGRKSGQPSSRQHASRPEALPMDFLVRPQSKIDPDEVRARGRQVVQDQKRLKMNX 1562
            LA+  Q RKSGQ SSR HASRPEA+P+DF+VRPQSKIDPDE+RAR +QVVQDQ+RLKMN 
Sbjct: 420  LADLPQERKSGQSSSRLHASRPEAMPLDFIVRPQSKIDPDEIRARAKQVVQDQRRLKMNK 479

Query: 1563 XXXXXXXXXXXXXXXXXXSVEGRGMVKF 1646
                              SVEGRGMVK+
Sbjct: 480  KLQQLKAPKKKQLQATKLSVEGRGMVKY 507


>ref|XP_002276883.2| PREDICTED: protein IWS1 homolog [Vitis vinifera]
            gi|296086725|emb|CBI32360.3| unnamed protein product
            [Vitis vinifera]
          Length = 507

 Score =  588 bits (1516), Expect = e-165
 Identities = 321/507 (63%), Positives = 362/507 (71%), Gaps = 15/507 (2%)
 Frame = +3

Query: 171  MGYD-DPYRDEDGEPLMDPDEVPSERE----------DSIEPEDLDWRN-ERTPTPVHDS 314
            MGY+ DPYRDEDGEPLMD DEV S+RE          D  +  D DWR  ER+PTPV+  
Sbjct: 1    MGYENDPYRDEDGEPLMDFDEVQSDREVEDQGHLLQDDIPDDNDDDWRRRERSPTPVYGD 60

Query: 315  DSGKAAAPKPRKRLVKKSFKDATPSYXXXXXXXXXXXF--NYSDDDVAEAWXXXXXXXXX 488
            DSG + + KPRKRLVKKS K++   Y           F  +  +DD              
Sbjct: 61   DSGFSKS-KPRKRLVKKSAKESPLHYPGIDEDDSPAAFQGDVDEDDFLRKRKDIDSGSKR 119

Query: 489  XXXXXXXXXDRXXXXXXXXXXXXXXXXXXXXDPEMKEMWDTIAGGDSEDDKEGVRTLDDD 668
                                           D E+KE+WDTIAGGDSEDD EG RT+DDD
Sbjct: 120  KEKKLRLEKKDKGFKSGLKKGMSRRSKDQDGDAEVKELWDTIAGGDSEDDHEGPRTVDDD 179

Query: 669  NFIDDSGVDPADRYGSDNELGFARDAPQAXXXXXXXXXXXLFNSGKRKRKNEKSAAEIAL 848
            NFIDD+GVDPADRYGSD E     DAPQA           LF  GK+K+KNEKSAAEIAL
Sbjct: 180  NFIDDTGVDPADRYGSDREARSPGDAPQAEEGEEDEEIKQLFKMGKKKKKNEKSAAEIAL 239

Query: 849  LVEQLMAELEVTAEEDAELNRQSKPAVNKLKKLPLLTEVLSKRQLQLEFLDHGVLALLKN 1028
            LVE +MAELEVTAEEDAELNRQSKPA+NKLKKLPLLTEVLSK+QLQ EFLDHGVL LLKN
Sbjct: 240  LVENVMAELEVTAEEDAELNRQSKPAINKLKKLPLLTEVLSKKQLQQEFLDHGVLTLLKN 299

Query: 1029 WLEPLPDGSLPNISIRTAILKILTDYPIDLEQYDRRDQLKKSGLGKVIMFLSRSDEETTA 1208
            WLEPLPDGSLPNI+IR AIL+ILTD+PIDLEQYDRR+QLKKSGLGKVIMFLS+SDEETTA
Sbjct: 300  WLEPLPDGSLPNINIRAAILRILTDFPIDLEQYDRREQLKKSGLGKVIMFLSKSDEETTA 359

Query: 1209 NRRLAKDLVDKWSRPIFNKSTRFEDMRSADEERVPYKKPS-KRSATKAAGLESRDDDLDL 1385
            NR+LAKDLVDKWSRPIFNKSTRFEDMR+ D+ERVP+++PS K+   KAAG+ESRDDDLDL
Sbjct: 360  NRKLAKDLVDKWSRPIFNKSTRFEDMRNFDDERVPFRRPSAKKPMNKAAGMESRDDDLDL 419

Query: 1386 AEFSQGRKSGQPSSRQHASRPEALPMDFLVRPQSKIDPDEVRARGRQVVQDQKRLKMNXX 1565
            A+  Q RKSGQ SSR HASRPEA+P+DF+VRPQSKIDPDE+RAR +QVVQDQ+RLKMN  
Sbjct: 420  ADLPQERKSGQSSSRLHASRPEAMPLDFIVRPQSKIDPDEIRARAKQVVQDQRRLKMNKK 479

Query: 1566 XXXXXXXXXXXXXXXXXSVEGRGMVKF 1646
                             SVEGRGMVK+
Sbjct: 480  LQQLKAPKKKQLQATKLSVEGRGMVKY 506


>ref|XP_004136208.1| PREDICTED: IWS1-like protein-like [Cucumis sativus]
            gi|449508046|ref|XP_004163201.1| PREDICTED: IWS1-like
            protein-like [Cucumis sativus]
          Length = 509

 Score =  523 bits (1346), Expect = e-146
 Identities = 262/356 (73%), Positives = 301/356 (84%), Gaps = 1/356 (0%)
 Frame = +3

Query: 582  DPEMKEMWDTIAGGDSEDDKEGVRTLDDDNFIDDSGVDPADRYGSDNELGFARDAPQAXX 761
            D ++KEMW+TIAGG S+DD+EG+RT+DDDNFIDDSGVDPADRYGSD+E    R AP+A  
Sbjct: 153  DGDVKEMWETIAGGGSDDDQEGIRTVDDDNFIDDSGVDPADRYGSDDEPRSPRYAPEAEE 212

Query: 762  XXXXXXXXXLFNSGKRKRKNEKSAAEIALLVEQLMAELEVTAEEDAELNRQSKPAVNKLK 941
                     LF  GK+K+KNEKS AEIALLVE +MAELEVTAEEDA+LNRQ KPAVNKLK
Sbjct: 213  GEEDDEINELFKVGKKKKKNEKSPAEIALLVENVMAELEVTAEEDADLNRQGKPAVNKLK 272

Query: 942  KLPLLTEVLSKRQLQLEFLDHGVLALLKNWLEPLPDGSLPNISIRTAILKILTDYPIDLE 1121
            KLPLLT+VLSK+QLQ EFLDHGVL LLKNWLEPLPDGSLPNI+IR AILKILTD+PIDLE
Sbjct: 273  KLPLLTDVLSKKQLQQEFLDHGVLTLLKNWLEPLPDGSLPNINIREAILKILTDFPIDLE 332

Query: 1122 QYDRRDQLKKSGLGKVIMFLSRSDEETTANRRLAKDLVDKWSRPIFNKSTRFEDMRSADE 1301
            QYDRR+QLKKSGLGKVIMFLS+SDEETT+NR+LAKDLVD+WSRPIFNKSTRFEDMR+ ++
Sbjct: 333  QYDRREQLKKSGLGKVIMFLSKSDEETTSNRKLAKDLVDQWSRPIFNKSTRFEDMRNVED 392

Query: 1302 ERVPYKKP-SKRSATKAAGLESRDDDLDLAEFSQGRKSGQPSSRQHASRPEALPMDFLVR 1478
            ERVP+++P +K+S  KAAG+ESRD DLDL EFSQGRKSGQ SSRQHASRPEA P+DF++R
Sbjct: 393  ERVPFRRPLAKKSGNKAAGMESRDGDLDLDEFSQGRKSGQSSSRQHASRPEATPLDFVIR 452

Query: 1479 PQSKIDPDEVRARGRQVVQDQKRLKMNXXXXXXXXXXXXXXXXXXXSVEGRGMVKF 1646
            PQSKIDPDE+RAR +Q VQDQ+R+KMN                   SVEGRGMVK+
Sbjct: 453  PQSKIDPDEIRARAKQAVQDQRRMKMNKKLQQLKAPKKKQLQATKLSVEGRGMVKY 508



 Score = 69.3 bits (168), Expect = 3e-09
 Identities = 42/77 (54%), Positives = 52/77 (67%), Gaps = 11/77 (14%)
 Frame = +3

Query: 171 MGY-DDPYRDEDGEPLMDPDEVPSEREDSIEP--------EDL-DWR-NERTPTPVHDSD 317
           MGY DDPYRDEDGEPLMD D + S+ E S EP        ED+ DW   +R+ TPV+D++
Sbjct: 1   MGYEDDPYRDEDGEPLMDFDHIQSDGEQSPEPYNPDELLDEDIGDWAGRQRSQTPVYDAE 60

Query: 318 SGKAAAPKPRKRLVKKS 368
             +A   +PRKRLVKKS
Sbjct: 61  EPQA---RPRKRLVKKS 74


>ref|XP_002519849.1| Transcription factor IWS1, putative [Ricinus communis]
            gi|223540895|gb|EEF42453.1| Transcription factor IWS1,
            putative [Ricinus communis]
          Length = 500

 Score =  501 bits (1290), Expect = e-139
 Identities = 258/356 (72%), Positives = 291/356 (81%), Gaps = 1/356 (0%)
 Frame = +3

Query: 582  DPEMKEMWDTIAGGDSEDDKEGVRTLDDDNFIDDSGVDPADRYGSDNELGFARDAPQAXX 761
            D E+KEMWDTIAGGDSEDD +GVRT+DDDNFIDDSGVDPADRYGSDNE     DAPQA  
Sbjct: 145  DGEVKEMWDTIAGGDSEDDHDGVRTMDDDNFIDDSGVDPADRYGSDNEPRSPTDAPQAEE 204

Query: 762  XXXXXXXXXLFNSGKRKRKNEKSAAEIALLVEQLMAELEVTAEEDAELNRQSKPAVNKLK 941
                     LF  GK+K+KNEKS AEIALLVE +MAELEVTAEEDAELNR+ KPA+ KLK
Sbjct: 205  GEEDEEIKELFKMGKKKKKNEKSPAEIALLVENVMAELEVTAEEDAELNRRGKPAITKLK 264

Query: 942  KLPLLTEVLSKRQLQLEFLDHGVLALLKNWLEPLPDGSLPNISIRTAILKILTDYPIDLE 1121
            KLPLLTEVLSK+QLQ EF+DHGVL LLKNWLEPLPDGSLPNI+IR AILKILTD+PIDLE
Sbjct: 265  KLPLLTEVLSKKQLQQEFIDHGVLTLLKNWLEPLPDGSLPNINIRAAILKILTDFPIDLE 324

Query: 1122 QYDRRDQLKKSGLGKVIMFLSRSDEETTANRRLAKDLVDKWSRPIFNKSTRFEDMRSADE 1301
            QYDRR+QLKKSGLGKVIMFLS+SDEETT+NR+LAKDLVDKWSRPIFNKSTRFEDMR+ D+
Sbjct: 325  QYDRREQLKKSGLGKVIMFLSKSDEETTSNRKLAKDLVDKWSRPIFNKSTRFEDMRNIDD 384

Query: 1302 ERVPYKKPSKRSATKAAGLESRDDDLDLAEFSQGRKSGQPSSR-QHASRPEALPMDFLVR 1478
            +R   +   +R    +AG+ESRD DLDL + S+ R+SGQ S+R QHASRPEA P+DFLVR
Sbjct: 385  DRAFRRPTVRRPVNNSAGMESRDGDLDL-DISRERRSGQSSARQQHASRPEATPLDFLVR 443

Query: 1479 PQSKIDPDEVRARGRQVVQDQKRLKMNXXXXXXXXXXXXXXXXXXXSVEGRGMVKF 1646
            PQSKIDP+EVRAR +QVVQDQ+RLKMN                   SVEGRGM+K+
Sbjct: 444  PQSKIDPEEVRARAKQVVQDQRRLKMNKKLQQLKAPKKKQLQATKLSVEGRGMLKY 499



 Score = 63.9 bits (154), Expect = 1e-07
 Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 7/70 (10%)
 Frame = +3

Query: 180 DDPYRDEDGEPLMDPDEV----PSEREDSIEPEDLDW---RNERTPTPVHDSDSGKAAAP 338
           DDPYRDEDGEPLMD D++    P ++ED +E +   W     ER+ TPV++++       
Sbjct: 5   DDPYRDEDGEPLMDYDDIQSPEPQQQEDLLEDDVDGWGEQERERSQTPVYNNND---KVE 61

Query: 339 KPRKRLVKKS 368
           KPRKRLVKKS
Sbjct: 62  KPRKRLVKKS 71


>ref|XP_002303442.1| predicted protein [Populus trichocarpa] gi|222840874|gb|EEE78421.1|
            predicted protein [Populus trichocarpa]
          Length = 353

 Score =  493 bits (1268), Expect = e-137
 Identities = 252/353 (71%), Positives = 286/353 (81%)
 Frame = +3

Query: 588  EMKEMWDTIAGGDSEDDKEGVRTLDDDNFIDDSGVDPADRYGSDNELGFARDAPQAXXXX 767
            E+KEMWDTIAGGDSEDD+EG RT+DDDNFIDDSGVDPA  YG DNE     DAPQA    
Sbjct: 1    EVKEMWDTIAGGDSEDDQEGARTVDDDNFIDDSGVDPAYGYGIDNEPRSPTDAPQAEEGE 60

Query: 768  XXXXXXXLFNSGKRKRKNEKSAAEIALLVEQLMAELEVTAEEDAELNRQSKPAVNKLKKL 947
                   +F  GK+++KNEKS AEIALLVE +MAELEVTAEEDA+LNRQ KPAVNKLKKL
Sbjct: 61   EDEEIKDMFKMGKKRKKNEKSPAEIALLVENVMAELEVTAEEDADLNRQGKPAVNKLKKL 120

Query: 948  PLLTEVLSKRQLQLEFLDHGVLALLKNWLEPLPDGSLPNISIRTAILKILTDYPIDLEQY 1127
            PLLTEVLSK+QLQ EF+DHGVL LLKNWLEPLPDGSLPNI+IR AILKILTD+PIDLEQY
Sbjct: 121  PLLTEVLSKKQLQQEFIDHGVLTLLKNWLEPLPDGSLPNINIRAAILKILTDFPIDLEQY 180

Query: 1128 DRRDQLKKSGLGKVIMFLSRSDEETTANRRLAKDLVDKWSRPIFNKSTRFEDMRSADEER 1307
            DRR+QLKKSGLGKVIMFLS+SDEETT+NR+LAKDLVDKWSRPIFNKSTRFEDMR+ +++R
Sbjct: 181  DRREQLKKSGLGKVIMFLSKSDEETTSNRKLAKDLVDKWSRPIFNKSTRFEDMRNVEDDR 240

Query: 1308 VPYKKPSKRSATKAAGLESRDDDLDLAEFSQGRKSGQPSSRQHASRPEALPMDFLVRPQS 1487
               +   +R +  +AG+ SRD DLDL + S+ RKS Q S RQHASRPEA P+DFLVRPQS
Sbjct: 241  AFRRPTVRRPSNNSAGMSSRDGDLDL-DISRERKSSQSSDRQHASRPEATPLDFLVRPQS 299

Query: 1488 KIDPDEVRARGRQVVQDQKRLKMNXXXXXXXXXXXXXXXXXXXSVEGRGMVKF 1646
            KIDP+EVRAR +QVVQDQ+RLKMN                   SVEGRGM+K+
Sbjct: 300  KIDPEEVRARAKQVVQDQRRLKMNKKLQQLKGPKKKQLQATKLSVEGRGMLKY 352


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