BLASTX nr result
ID: Coptis24_contig00005010
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00005010
(1231 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277060.1| PREDICTED: uncharacterized protein LOC100248... 377 e-137
emb|CBI22898.3| unnamed protein product [Vitis vinifera] 377 e-137
ref|XP_002270469.1| PREDICTED: uncharacterized protein LOC100248... 372 e-135
emb|CBI36946.3| unnamed protein product [Vitis vinifera] 372 e-135
ref|XP_002519206.1| WD-repeat protein, putative [Ricinus communi... 368 e-133
>ref|XP_002277060.1| PREDICTED: uncharacterized protein LOC100248159 [Vitis vinifera]
Length = 1756
Score = 377 bits (969), Expect(4) = e-137
Identities = 181/205 (88%), Positives = 190/205 (92%)
Frame = -2
Query: 1230 NIVTCSRDGSAIIWIPRSRRSHVKIGRWTRAYHLKVXXXXXXPQSSRAGPRQRLLPAPRG 1051
NIVTCSRDGSAIIWIPRSRRSH K+GRWTRAYHLKV PQ R GPRQR+LP PRG
Sbjct: 489 NIVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVPPPPMPPQPPRGGPRQRILPTPRG 548
Query: 1050 VNMIVWSLDNRFVLAAIMDRRICVWNAVDGSLVHSLTGHTESSYVLDVHPFDPRIAMSAG 871
VNMIVWSLDNRFVLAAIMD RICVWNAVDGSLVHSLTGHTES+YVLDVHPF+PRIAMSAG
Sbjct: 549 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 608
Query: 870 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIILSDDVGQIYILNTGQGESQKD 691
YDG+TIVWDIWEGTPIRIY+ RFKLVDGKFSPDGTSIILSDDVGQ+YIL+TGQGESQKD
Sbjct: 609 YDGKTIVWDIWEGTPIRIYDTARFKLVDGKFSPDGTSIILSDDVGQLYILSTGQGESQKD 668
Query: 690 AKYDQFFLGDYRPLIQDTHGNVLDQ 616
A YDQFFLGDYRPLIQDT+GNVLDQ
Sbjct: 669 AMYDQFFLGDYRPLIQDTYGNVLDQ 693
Score = 82.0 bits (201), Expect(4) = e-137
Identities = 52/136 (38%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Frame = -2
Query: 399 SNDNDSEYNIADELSSEGEQGCNGNVLFDDPECSAEESDFDYSKKDGFRRSKRKGHREDV 220
++D DSEYN+ +E S+ GEQG + DPECSAE+SD + S KDG RRSKRK + +
Sbjct: 787 TDDTDSEYNVTEEYSTGGEQGSLSSNSSGDPECSAEDSDVENSHKDGLRRSKRKKQKAET 846
Query: 219 YFGSSSGQLIKKRNLNKC-GASLPFXXXXXXXXXXXXXXXXXXXXXSLRPQXXXXXXXXN 43
+ SG+ +K+RNL++ G SL SLRPQ
Sbjct: 847 EIMTFSGRRVKRRNLDEFDGNSLRSNRTRKSRSGRKVSHKNSSKSKSLRPQRAAARNALT 906
Query: 42 MISQFSG---DSEDED 4
+ S+ G D EDED
Sbjct: 907 LFSRMKGTSTDGEDED 922
Score = 65.9 bits (159), Expect(4) = e-137
Identities = 32/57 (56%), Positives = 44/57 (77%), Gaps = 3/57 (5%)
Frame = -3
Query: 560 AQGIDWMPSSVKHAIGPADISGFQEYQILPLIDLDSMIEPMPQFI---DWEPEIEIQ 399
A GI+W PSS++ A+GP D + Q+YQ+LPL DLD +I+P+P+FI DWEPE E+Q
Sbjct: 731 ALGIEWRPSSLRLAVGP-DFNLDQDYQMLPLPDLDVLIDPLPEFIDVMDWEPENEVQ 786
Score = 35.8 bits (81), Expect(4) = e-137
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -1
Query: 613 MIPYPEPYQSMNQKRRL 563
MIPYPEPYQSM Q+RRL
Sbjct: 713 MIPYPEPYQSMYQQRRL 729
>emb|CBI22898.3| unnamed protein product [Vitis vinifera]
Length = 1569
Score = 377 bits (969), Expect(4) = e-137
Identities = 181/205 (88%), Positives = 190/205 (92%)
Frame = -2
Query: 1230 NIVTCSRDGSAIIWIPRSRRSHVKIGRWTRAYHLKVXXXXXXPQSSRAGPRQRLLPAPRG 1051
NIVTCSRDGSAIIWIPRSRRSH K+GRWTRAYHLKV PQ R GPRQR+LP PRG
Sbjct: 483 NIVTCSRDGSAIIWIPRSRRSHGKVGRWTRAYHLKVPPPPMPPQPPRGGPRQRILPTPRG 542
Query: 1050 VNMIVWSLDNRFVLAAIMDRRICVWNAVDGSLVHSLTGHTESSYVLDVHPFDPRIAMSAG 871
VNMIVWSLDNRFVLAAIMD RICVWNAVDGSLVHSLTGHTES+YVLDVHPF+PRIAMSAG
Sbjct: 543 VNMIVWSLDNRFVLAAIMDCRICVWNAVDGSLVHSLTGHTESTYVLDVHPFNPRIAMSAG 602
Query: 870 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIILSDDVGQIYILNTGQGESQKD 691
YDG+TIVWDIWEGTPIRIY+ RFKLVDGKFSPDGTSIILSDDVGQ+YIL+TGQGESQKD
Sbjct: 603 YDGKTIVWDIWEGTPIRIYDTARFKLVDGKFSPDGTSIILSDDVGQLYILSTGQGESQKD 662
Query: 690 AKYDQFFLGDYRPLIQDTHGNVLDQ 616
A YDQFFLGDYRPLIQDT+GNVLDQ
Sbjct: 663 AMYDQFFLGDYRPLIQDTYGNVLDQ 687
Score = 82.0 bits (201), Expect(4) = e-137
Identities = 52/136 (38%), Positives = 70/136 (51%), Gaps = 4/136 (2%)
Frame = -2
Query: 399 SNDNDSEYNIADELSSEGEQGCNGNVLFDDPECSAEESDFDYSKKDGFRRSKRKGHREDV 220
++D DSEYN+ +E S+ GEQG + DPECSAE+SD + S KDG RRSKRK + +
Sbjct: 781 TDDTDSEYNVTEEYSTGGEQGSLSSNSSGDPECSAEDSDVENSHKDGLRRSKRKKQKAET 840
Query: 219 YFGSSSGQLIKKRNLNKC-GASLPFXXXXXXXXXXXXXXXXXXXXXSLRPQXXXXXXXXN 43
+ SG+ +K+RNL++ G SL SLRPQ
Sbjct: 841 EIMTFSGRRVKRRNLDEFDGNSLRSNRTRKSRSGRKVSHKNSSKSKSLRPQRAAARNALT 900
Query: 42 MISQFSG---DSEDED 4
+ S+ G D EDED
Sbjct: 901 LFSRMKGTSTDGEDED 916
Score = 65.9 bits (159), Expect(4) = e-137
Identities = 32/57 (56%), Positives = 44/57 (77%), Gaps = 3/57 (5%)
Frame = -3
Query: 560 AQGIDWMPSSVKHAIGPADISGFQEYQILPLIDLDSMIEPMPQFI---DWEPEIEIQ 399
A GI+W PSS++ A+GP D + Q+YQ+LPL DLD +I+P+P+FI DWEPE E+Q
Sbjct: 725 ALGIEWRPSSLRLAVGP-DFNLDQDYQMLPLPDLDVLIDPLPEFIDVMDWEPENEVQ 780
Score = 35.8 bits (81), Expect(4) = e-137
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = -1
Query: 613 MIPYPEPYQSMNQKRRL 563
MIPYPEPYQSM Q+RRL
Sbjct: 707 MIPYPEPYQSMYQQRRL 723
>ref|XP_002270469.1| PREDICTED: uncharacterized protein LOC100248563 [Vitis vinifera]
Length = 1766
Score = 372 bits (955), Expect(3) = e-135
Identities = 179/205 (87%), Positives = 187/205 (91%)
Frame = -2
Query: 1230 NIVTCSRDGSAIIWIPRSRRSHVKIGRWTRAYHLKVXXXXXXPQSSRAGPRQRLLPAPRG 1051
NIVTCSRDGSAIIWIPRSRR H K+GRWTRAYHLKV PQ R GPRQRLLP PRG
Sbjct: 490 NIVTCSRDGSAIIWIPRSRRYHGKVGRWTRAYHLKVPPPPMPPQPPRGGPRQRLLPTPRG 549
Query: 1050 VNMIVWSLDNRFVLAAIMDRRICVWNAVDGSLVHSLTGHTESSYVLDVHPFDPRIAMSAG 871
VNMIVWSLDNRFVLAAIMD RICVWNA DGSLVHSLTGH+ S+YVLDVHPF+PRIAMSAG
Sbjct: 550 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHSASTYVLDVHPFNPRIAMSAG 609
Query: 870 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIILSDDVGQIYILNTGQGESQKD 691
YDG+TIVWDIWEG PIR YEIGRFKLVDGKFSPDGTSI+LSDDVGQIY+LNTGQGESQKD
Sbjct: 610 YDGKTIVWDIWEGIPIRTYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQKD 669
Query: 690 AKYDQFFLGDYRPLIQDTHGNVLDQ 616
AKYDQFFLGDYRPLI+DT GNVLDQ
Sbjct: 670 AKYDQFFLGDYRPLIRDTIGNVLDQ 694
Score = 95.9 bits (237), Expect(3) = e-135
Identities = 56/134 (41%), Positives = 75/134 (55%), Gaps = 1/134 (0%)
Frame = -2
Query: 399 SNDNDSEYNIADELSSEGEQGC-NGNVLFDDPECSAEESDFDYSKKDGFRRSKRKGHRED 223
S+D DSEYNIA+E SSEGE G + F DPECSAE++D ++S KDG RRS+RK +R +
Sbjct: 788 SDDTDSEYNIAEEYSSEGEHGSLSAASSFSDPECSAEDTDVEHSHKDGLRRSRRKKYRSE 847
Query: 222 VYFGSSSGQLIKKRNLNKCGASLPFXXXXXXXXXXXXXXXXXXXXXSLRPQXXXXXXXXN 43
V +SSG+ +K+RNLN+C + SLRPQ N
Sbjct: 848 VEIMTSSGRRVKRRNLNECDGTSSRSRTKKSKNGRKVSKRNSSKIQSLRPQRAAKRNALN 907
Query: 42 MISQFSGDSEDEDE 1
M SQ + S + D+
Sbjct: 908 MFSQITETSTEGDD 921
Score = 62.4 bits (150), Expect(3) = e-135
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 9/76 (11%)
Frame = -3
Query: 602 SRTLPEHEP------EAAFSAQGIDWMPSSVKHAIGPADISGFQEYQILPLIDLDSMIEP 441
S +P EP + A GI+W PSS+ A+GP D S QEYQ+ PL DLD ++EP
Sbjct: 712 SSMIPYSEPYQTMYQQRRLGALGIEWHPSSINLAVGP-DFSLGQEYQMPPLADLDRVMEP 770
Query: 440 MPQFID---WEPEIEI 402
+P+ +D WEPE E+
Sbjct: 771 LPELVDAVYWEPENEV 786
>emb|CBI36946.3| unnamed protein product [Vitis vinifera]
Length = 1549
Score = 372 bits (955), Expect(3) = e-135
Identities = 179/205 (87%), Positives = 187/205 (91%)
Frame = -2
Query: 1230 NIVTCSRDGSAIIWIPRSRRSHVKIGRWTRAYHLKVXXXXXXPQSSRAGPRQRLLPAPRG 1051
NIVTCSRDGSAIIWIPRSRR H K+GRWTRAYHLKV PQ R GPRQRLLP PRG
Sbjct: 487 NIVTCSRDGSAIIWIPRSRRYHGKVGRWTRAYHLKVPPPPMPPQPPRGGPRQRLLPTPRG 546
Query: 1050 VNMIVWSLDNRFVLAAIMDRRICVWNAVDGSLVHSLTGHTESSYVLDVHPFDPRIAMSAG 871
VNMIVWSLDNRFVLAAIMD RICVWNA DGSLVHSLTGH+ S+YVLDVHPF+PRIAMSAG
Sbjct: 547 VNMIVWSLDNRFVLAAIMDCRICVWNAADGSLVHSLTGHSASTYVLDVHPFNPRIAMSAG 606
Query: 870 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIILSDDVGQIYILNTGQGESQKD 691
YDG+TIVWDIWEG PIR YEIGRFKLVDGKFSPDGTSI+LSDDVGQIY+LNTGQGESQKD
Sbjct: 607 YDGKTIVWDIWEGIPIRTYEIGRFKLVDGKFSPDGTSIVLSDDVGQIYLLNTGQGESQKD 666
Query: 690 AKYDQFFLGDYRPLIQDTHGNVLDQ 616
AKYDQFFLGDYRPLI+DT GNVLDQ
Sbjct: 667 AKYDQFFLGDYRPLIRDTIGNVLDQ 691
Score = 95.9 bits (237), Expect(3) = e-135
Identities = 56/134 (41%), Positives = 75/134 (55%), Gaps = 1/134 (0%)
Frame = -2
Query: 399 SNDNDSEYNIADELSSEGEQGC-NGNVLFDDPECSAEESDFDYSKKDGFRRSKRKGHRED 223
S+D DSEYNIA+E SSEGE G + F DPECSAE++D ++S KDG RRS+RK +R +
Sbjct: 785 SDDTDSEYNIAEEYSSEGEHGSLSAASSFSDPECSAEDTDVEHSHKDGLRRSRRKKYRSE 844
Query: 222 VYFGSSSGQLIKKRNLNKCGASLPFXXXXXXXXXXXXXXXXXXXXXSLRPQXXXXXXXXN 43
V +SSG+ +K+RNLN+C + SLRPQ N
Sbjct: 845 VEIMTSSGRRVKRRNLNECDGTSSRSRTKKSKNGRKVSKRNSSKIQSLRPQRAAKRNALN 904
Query: 42 MISQFSGDSEDEDE 1
M SQ + S + D+
Sbjct: 905 MFSQITETSTEGDD 918
Score = 62.4 bits (150), Expect(3) = e-135
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 9/76 (11%)
Frame = -3
Query: 602 SRTLPEHEP------EAAFSAQGIDWMPSSVKHAIGPADISGFQEYQILPLIDLDSMIEP 441
S +P EP + A GI+W PSS+ A+GP D S QEYQ+ PL DLD ++EP
Sbjct: 709 SSMIPYSEPYQTMYQQRRLGALGIEWHPSSINLAVGP-DFSLGQEYQMPPLADLDRVMEP 767
Query: 440 MPQFID---WEPEIEI 402
+P+ +D WEPE E+
Sbjct: 768 LPELVDAVYWEPENEV 783
>ref|XP_002519206.1| WD-repeat protein, putative [Ricinus communis]
gi|223541521|gb|EEF43070.1| WD-repeat protein, putative
[Ricinus communis]
Length = 1519
Score = 368 bits (944), Expect(4) = e-133
Identities = 172/205 (83%), Positives = 187/205 (91%)
Frame = -2
Query: 1230 NIVTCSRDGSAIIWIPRSRRSHVKIGRWTRAYHLKVXXXXXXPQSSRAGPRQRLLPAPRG 1051
NIVTCSRDGSA+IW+P+SRRSH K GRWTR Y LK+ PQ R GPRQR+LP PRG
Sbjct: 492 NIVTCSRDGSAMIWVPKSRRSHGKAGRWTRLYQLKIPAPPVPPQPPRGGPRQRILPTPRG 551
Query: 1050 VNMIVWSLDNRFVLAAIMDRRICVWNAVDGSLVHSLTGHTESSYVLDVHPFDPRIAMSAG 871
VNMI+WSLDNRFVLAA+MD RICVWNA DG +VHSLTGHT+S+YVLDVHPF+PRIAMSAG
Sbjct: 552 VNMIIWSLDNRFVLAAVMDCRICVWNAADGGIVHSLTGHTDSTYVLDVHPFNPRIAMSAG 611
Query: 870 YDGRTIVWDIWEGTPIRIYEIGRFKLVDGKFSPDGTSIILSDDVGQIYILNTGQGESQKD 691
YDGRTIVWDIWEGTPIRIYEI RFKLVDGKFSPDGTSIILSDDVGQ+YILNTGQGESQ+D
Sbjct: 612 YDGRTIVWDIWEGTPIRIYEISRFKLVDGKFSPDGTSIILSDDVGQLYILNTGQGESQQD 671
Query: 690 AKYDQFFLGDYRPLIQDTHGNVLDQ 616
AKYDQFFLGDYRP+IQDT+GNVLDQ
Sbjct: 672 AKYDQFFLGDYRPVIQDTYGNVLDQ 696
Score = 73.6 bits (179), Expect(4) = e-133
Identities = 36/78 (46%), Positives = 53/78 (67%)
Frame = -2
Query: 399 SNDNDSEYNIADELSSEGEQGCNGNVLFDDPECSAEESDFDYSKKDGFRRSKRKGHREDV 220
S+DNDSEYN+ +E SS GEQG + DP+CS+E S+ + KD F RS RK + ++
Sbjct: 790 SDDNDSEYNVTEEYSSGGEQGSLNSSSSVDPDCSSEGSEIE--GKDSFHRSTRKKQKAEI 847
Query: 219 YFGSSSGQLIKKRNLNKC 166
+SSG+ +K+RNL++C
Sbjct: 848 EIMTSSGRRVKRRNLDEC 865
Score = 65.5 bits (158), Expect(4) = e-133
Identities = 31/58 (53%), Positives = 42/58 (72%), Gaps = 3/58 (5%)
Frame = -3
Query: 560 AQGIDWMPSSVKHAIGPADISGFQEYQILPLIDLDSMIEPMPQFI---DWEPEIEIQA 396
A +DW P S+K A+GP D S EYQ+LPL DLD ++EP+P+F+ DWEPE E+Q+
Sbjct: 734 ALNMDWKPPSIKLAVGP-DFSLDPEYQMLPLADLDVLVEPLPEFVDVMDWEPENEVQS 790
Score = 38.5 bits (88), Expect(4) = e-133
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -1
Query: 619 SGMIPYPEPYQSMNQKRRL 563
SGM PYPEPYQSM QKRRL
Sbjct: 714 SGMNPYPEPYQSMYQKRRL 732