BLASTX nr result

ID: Coptis24_contig00005005 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00005005
         (1703 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274278.1| PREDICTED: uncharacterized protein LOC100259...   351   4e-94
ref|XP_002524810.1| conserved hypothetical protein [Ricinus comm...   313   1e-82
ref|XP_002321059.1| predicted protein [Populus trichocarpa] gi|2...   294   6e-77
ref|XP_002301565.1| predicted protein [Populus trichocarpa] gi|2...   288   4e-75
ref|XP_003518932.1| PREDICTED: uncharacterized protein LOC100800...   280   6e-73

>ref|XP_002274278.1| PREDICTED: uncharacterized protein LOC100259706 [Vitis vinifera]
            gi|296086692|emb|CBI32327.3| unnamed protein product
            [Vitis vinifera]
          Length = 429

 Score =  351 bits (900), Expect = 4e-94
 Identities = 207/424 (48%), Positives = 264/424 (62%), Gaps = 19/424 (4%)
 Frame = +1

Query: 19   YVPGLLFHHEQALCRSSKEVLSVVPSSGRKQEILRSG----------TRSPMGWLFS--- 159
            Y PGL+FH EQ +CR SK+   ++ S G +QE  RSG          T  P+  L     
Sbjct: 12   YPPGLVFHPEQGMCRVSKDCQPLLGSPGPRQESTRSGLNLRPLQREETWKPLSGLLESDQ 71

Query: 160  ----DQSDRKPVLIDVQDTRPDSMHFSFGISEHYTRREKIMQYLVSGSSVSDKDGLDFXX 327
                DQ+  + VL+D QDT P S+ FS  I+E  TR EKI+Q+L+S SS  +K  LD   
Sbjct: 72   FVKIDQTVSRHVLLDAQDTLPGSVLFSLAIAEQCTRHEKILQFLMSRSSEIEKGELDLSV 131

Query: 328  XXXXXXXXXXAIEMRLRSLGVHGDGRYLYEVGDDESQPSVVYPS-DYYMQKPLLEPMADS 504
                      +  M+ + +    D  +     D E+QP+++YPS + + QKP ++ + D 
Sbjct: 132  LSDLMGIQASSTGMQEQPV----DPGFCSCYQDTEAQPALIYPSSELHAQKPFVDFVGDL 187

Query: 505  ALFSKIRVHPDGRALFTGTEIEMKDFISVFAEFYPSKKSVEWRKQSLLVPHFTRLETEPH 684
            A  SK+ VHPDGR  F GT  EMKD +SV AEFY SK S +  KQSLLVPHFTRLE    
Sbjct: 188  ARSSKLIVHPDGRVSFMGTGTEMKDLLSVVAEFYLSKNSTKHGKQSLLVPHFTRLE---R 244

Query: 685  MNIHGSSLTMETTTFPPLKSPETVKLXXXXXXXXXXXAGREKDLCRRSSFHAFECLLSLI 864
             +  GSSL +ET    PLKSPE  KL             RE+DL  ++ FHA E LLS++
Sbjct: 245  ADTKGSSLKVETVV-APLKSPEKTKLKPSPKKKNGRKGCRERDLYEKNYFHACESLLSIM 303

Query: 865  LDKRRG-KEALLSVKQSGSELPPLLTQFSAGIAGTGLAVIFSVVLNVSSRKAPFCAPTML 1041
            ++KR+  K A LS+K+SG ELP LLTQFSAGIAGTGLAV+FSV+  V+  + PFCA   L
Sbjct: 304  MNKRQQRKTAFLSLKKSGPELPELLTQFSAGIAGTGLAVLFSVICKVACGRVPFCASKFL 363

Query: 1042 NTGFGFGLVWLSWGVNKLRDTIAHISKSSSKPGFNEKDMMRNVDRSVNDIFLRAATIMAI 1221
            +TGFGFGLVWLSW VNKLRDT+ HISK S K    E++MM+ VDRSVN+IF RAAT+M +
Sbjct: 364  STGFGFGLVWLSWAVNKLRDTVVHISKKSGKLALKEEEMMKRVDRSVNEIFFRAATVMTV 423

Query: 1222 AVLR 1233
            AVLR
Sbjct: 424  AVLR 427


>ref|XP_002524810.1| conserved hypothetical protein [Ricinus communis]
            gi|223535994|gb|EEF37653.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 419

 Score =  313 bits (801), Expect = 1e-82
 Identities = 196/426 (46%), Positives = 255/426 (59%), Gaps = 22/426 (5%)
 Frame = +1

Query: 28   GLLFHHEQALCRSSKEVLSVVPSSGRKQEILRSGT-----------RSPMGWLFSDQSDR 174
            GL+F  EQ   R  K+     P  G + EI R  +           R   G+    Q  R
Sbjct: 17   GLVFVPEQT--RVLKDSQPYFPCQGARHEIKRPNSLSVEPCQHEPWRPVNGFCDRTQFAR 74

Query: 175  ------KPVLIDVQDTRPDSMHFSFGISEHYTRREKIMQYLVSGSSVSDKDGLDFXXXXX 336
                  +PVLIDVQDT PDS+ FSFGI+E  T+ EKI+++L SGSS  +K GLD      
Sbjct: 75   IDSPVGRPVLIDVQDTCPDSVLFSFGIAEQCTKHEKILKFLTSGSSELEKSGLDLSLLSD 134

Query: 337  XXXXXXXAIEMRLRSLGVHGDGRYLYEVGDDESQPS--VVYPSDYY-MQKPLLEPMADSA 507
                      M L++L           V D   QP   ++YP+      KPL++ + D A
Sbjct: 135  L---------MDLQAL-----------VLDVHQQPCSPLIYPNGSCDAPKPLVDFVGDLA 174

Query: 508  LFSKIRVHPDGRALFTGTEIEMKDFISVFAEFYPSKKSVEWRKQSLLVPHFTRLE-TEPH 684
              SKI VHPDGR L TG+  EMKD +S+ AEFY SK S  W KQS+LVP F     +E  
Sbjct: 175  SSSKITVHPDGRVLLTGSGTEMKDILSIVAEFYLSKTSTTWTKQSMLVPRFAWPHISETQ 234

Query: 685  MNIHGSSLTMETTTFPPLKSPETVKLXXXXXXXXXXXAGREKDLCRRSSFHAFECLLSLI 864
             N+  SSL ++  T  PL+S E +KL             +E+DL +R+ FHA E LLSL+
Sbjct: 235  ANVLNSSLNVKDVT-APLRSSEKIKLKPSPKKKSCRKGNKERDLYQRNYFHACESLLSLM 293

Query: 865  LDKRR-GKEALLSVKQSGSELPPLLTQFSAGIAGTGLAVIFSVVLNVSSRKAPFCAPTML 1041
            +DK+R GK A+LS+K+SG ELP LLTQFSAGIAGTGLAV+FSVV  V+  + PFC   + 
Sbjct: 294  MDKKRHGKTAILSLKKSGPELPSLLTQFSAGIAGTGLAVLFSVVCKVACGRMPFCTAKLF 353

Query: 1042 NTGFGFGLVWLSWGVNKLRDTIAHISKSSSKPGFNEKDMMRNVDRSVNDIFLRAATIMAI 1221
            +TGFGFGLVWLSW VN+LRDTI +ISK++SK G  +++M+R VDRS+ D++ RAAT+M +
Sbjct: 354  STGFGFGLVWLSWAVNRLRDTIIYISKNASKLGLKDEEMLRIVDRSLKDVYFRAATLMVV 413

Query: 1222 AVLRFA 1239
            A LR A
Sbjct: 414  AALRLA 419


>ref|XP_002321059.1| predicted protein [Populus trichocarpa] gi|222861832|gb|EEE99374.1|
            predicted protein [Populus trichocarpa]
          Length = 418

 Score =  294 bits (752), Expect = 6e-77
 Identities = 181/423 (42%), Positives = 245/423 (57%), Gaps = 20/423 (4%)
 Frame = +1

Query: 25   PGLLFHHEQALCRSSKEVLSVVPSSGRKQEILRSGTR-----------SPMGWLFS---- 159
            P ++FH +Q   R  K+    +PS G +QEI R  +             PM         
Sbjct: 16   PAIVFHQDQK--RVFKDCQPYLPSQGTRQEITRLNSLVLKLHQHEEPWRPMNRFCESNRF 73

Query: 160  ---DQSDRKPVLIDVQDTRPDSMHFSFGISEHYTRREKIMQYLVSGSSVSDKDGLDFXXX 330
               D + R P L+DVQD RPDS+ FSFGI E  TR+EKI+Q+L+S S+  ++DGLD    
Sbjct: 74   TEIDSTVRTPTLVDVQDARPDSVLFSFGIVEKCTRQEKILQFLMSESNKLERDGLDLSLL 133

Query: 331  XXXXXXXXXAIEMRLRSLGVHGDGRYLYEVGDDESQPSVVYPSDYY-MQKPLLEPMADSA 507
                        M L++  V  D + L       S   ++YPS      K L++ +AD  
Sbjct: 134  SEL---------MGLQT--VMFDAQQL-------SHSPLIYPSGQLDAPKSLVDFVADMV 175

Query: 508  LFSKIRVHPDGRALFTGTEIEMKDFISVFAEFYPSKKSVEWRKQSLLVPHFTRLET-EPH 684
              SK+ V PDGR L TG+  EMKD +S  AEFY SK S  W+KQS+L+P  TR +T +  
Sbjct: 176  CSSKLTVLPDGRVLLTGSGTEMKDVLSTVAEFYLSKNSTMWKKQSMLIPKLTRFDTSKVD 235

Query: 685  MNIHGSSLTMETTTFPPLKSPETVKLXXXXXXXXXXXAGREKDLCRRSSFHAFECLLSLI 864
             NI GSS      +   LKSP  VK+            GRE+DL +R+ FHA E LLSL+
Sbjct: 236  ANITGSSFKARDASSATLKSP--VKIKPSRKKKNNRKGGRERDLYKRNYFHACESLLSLM 293

Query: 865  LDKRRGKEALLSVKQSGSELPPLLTQFSAGIAGTGLAVIFSVVLNVSSRKAPFCAPTMLN 1044
            +DKRRGK A+L +K+SG ELP LL QFS GIAG GLA++FS++  V+  +  FCA  + +
Sbjct: 294  MDKRRGKTAVLLLKKSGPELPELLNQFSVGIAGAGLALLFSIICRVACGRVSFCASKLFS 353

Query: 1045 TGFGFGLVWLSWGVNKLRDTIAHISKSSSKPGFNEKDMMRNVDRSVNDIFLRAATIMAIA 1224
            T  G GLVWLSW V+KL+DT+ +ISK +SK G  ++++M  V+ S  DI+ RA T+MA+A
Sbjct: 354  TSVGLGLVWLSWAVSKLKDTVVYISKHASKLGLKDEEIMGIVNESFRDIYFRAVTVMAVA 413

Query: 1225 VLR 1233
            VLR
Sbjct: 414  VLR 416


>ref|XP_002301565.1| predicted protein [Populus trichocarpa] gi|222843291|gb|EEE80838.1|
            predicted protein [Populus trichocarpa]
          Length = 401

 Score =  288 bits (736), Expect = 4e-75
 Identities = 176/416 (42%), Positives = 239/416 (57%), Gaps = 34/416 (8%)
 Frame = +1

Query: 88   VPSSGRKQEILRSGTRS-----------PMGWLFS-------DQSDRKPVLIDVQDTRPD 213
            +PS G +QEI RS +             PM   +        D + + P+LIDVQD RPD
Sbjct: 9    LPSWGARQEITRSSSLMLKLPQHEQPWRPMNRFYQSNQFAEIDSTVKMPILIDVQDARPD 68

Query: 214  SMHFSFGISEHYTRREKIMQYLVSGSSVSDKDGLDFXXXXXXXXXXXXAIEMRLRSLGVH 393
            S+ F FGI E  TR EKI+Q+L+S S+  ++DGLD               +   +S   H
Sbjct: 69   SVLFIFGIVEKCTRHEKILQFLMSKSNKLERDGLDLSFLSELTGLQAVMFDAHQQSHSPH 128

Query: 394  GDGRYLYEVGDDESQPSVVYPSDY--YMQKPLLEPMADSALFSKIRVHPDGRALFTGTEI 567
                        +S   ++YPSD   Y++ P+ + + D A  SK+RV PDGR L TG+ +
Sbjct: 129  -----------QQSHSPLIYPSDQFDYLKSPV-DILGDMAHSSKLRVLPDGRVLLTGSGM 176

Query: 568  EMKDFISVFAEFYPSKKSVEWRKQSLLVPHFTR-------LETEPHMN-------IHGSS 705
            EMKD +S  AEFY S+ S  WRKQSLLVPH +R       L T+ HM        +  S 
Sbjct: 177  EMKDILSTVAEFYLSRNSNIWRKQSLLVPHLSRYGYLDLVLFTQKHMAAFFLVMLLKNSP 236

Query: 706  LTMETTTFPPLKSPETVKLXXXXXXXXXXXAGREKDLCRRSSFHAFECLLSLILDKRRGK 885
            + +E    P  K   T K             GRE DL +R+ F+A E LLSL++D+R  K
Sbjct: 237  MHIEKEKLPSRKRKNTRK------------GGRESDLYKRNYFNACESLLSLMMDRRHEK 284

Query: 886  EALLSVKQSGSELPPLLTQFSAGIAGTGLAVIFSVVLNVSSRKAPFCAPTMLNTGFGFGL 1065
             A+LS+++SG ELP LL Q S GIAGTGLA++FSV+  V+ R+ PF A  +  TG GFGL
Sbjct: 285  TAVLSLRKSGPELPLLLNQLSVGIAGTGLALLFSVICKVACRRVPFSACKLFCTGIGFGL 344

Query: 1066 VWLSWGVNKLRDTIAHISKSSSKPGFNEKDMMRNVDRSVNDIFLRAATIMAIAVLR 1233
            VWLSW VNKL+DT+ +ISK +SK G  +K+++R VD+S +DI+ RA T+MA+ VLR
Sbjct: 345  VWLSWAVNKLKDTVVYISKHASKVGLKDKEIIRIVDKSFHDIYFRAVTVMAVVVLR 400


>ref|XP_003518932.1| PREDICTED: uncharacterized protein LOC100800200 [Glycine max]
          Length = 416

 Score =  280 bits (717), Expect = 6e-73
 Identities = 180/436 (41%), Positives = 254/436 (58%), Gaps = 23/436 (5%)
 Frame = +1

Query: 1    IASSSSYVPGLLFHHEQAL--CRSSKEVLSVVPSSGRKQEILRSGT---------RSPMG 147
            + +S    PGL    E A+  C  +K    ++PS   K EI+R G+         +S   
Sbjct: 7    LMASHGCPPGLSLQQELAMVGCTITKGCKPLLPSPVLKLEIIRYGSSLNPFEESSKSQKE 66

Query: 148  WLFSDQ------SDRKPVLIDVQDTRPDSMHFSFGISEHYTRREKIMQYLVSGSSVSDKD 309
            W  S+Q      S ++P+LIDVQ+T P  + F FGI E  +  +KI+Q ++S S+ +   
Sbjct: 67   WFNSNQIVNMNLSTQRPMLIDVQETYPSPVDFGFGIVEQCSEHDKILQCIMSESAEAGIG 126

Query: 310  GLDFXXXXXXXXXXXXAIEMRLRSLGVHGDGRYLYEVGDDESQPSV---VYPSDYYMQKP 480
            G+                      + +  D   L   G DE Q  +   +  S +++ K 
Sbjct: 127  GVH---------------------ISLLSDLMGLQLPGIDEPQKPLTPLIPKSKFFIPKL 165

Query: 481  LLEPMADSALFSKIRVHPDGRALFTGTEIEMKDFISVFAEFYPSKKSVEWRKQSLLVPHF 660
            LL+   DSA  SKI VHPDG+  F GT IEMKD +SV A+ Y  +K     KQS+LVPHF
Sbjct: 166  LLDIFQDSAFSSKITVHPDGQVTFMGTAIEMKDLLSVVADSYLLRKG---EKQSMLVPHF 222

Query: 661  TRLE-TEPHMNIHGSSLTMETTTFPPLKSPETVKLXXXXXXXXXXXAGREKDLCRRSSFH 837
            +R+   E  +    S+L + +T   PLKSPE VK+             RE+DL +++  H
Sbjct: 223  SRMSINEVEVTSLSSTLDIHSTLTVPLKSPEKVKVKPSQKKNKK--VARERDLFKKNYLH 280

Query: 838  AFECLLSLILDKRRG-KEALLSVKQSGSELPPLLTQFSAGIAGTGLAVIFSVVLNVS-SR 1011
            A E LLSL++DKRR  K A+LS+K+SG ELP LLTQFSAGIAGTGLAV+ SV+  ++  R
Sbjct: 281  ACESLLSLMVDKRRQRKTAILSLKKSGPELPELLTQFSAGIAGTGLAVLLSVICKLACGR 340

Query: 1012 KAPFCAPTMLNTGFGFGLVWLSWGVNKLRDTIAHISKSSSKPGFNEKDMMRNVDRSVNDI 1191
               FCA  +LNTGFGFGLVWLSW VNKLRDTI  ++K++ K G  +++M++ VD+S+ ++
Sbjct: 341  GVSFCAYKLLNTGFGFGLVWLSWAVNKLRDTIVSMNKNTGKLGLKDEEMIQKVDKSLREV 400

Query: 1192 FLRAATIMAIAVLRFA 1239
            + RAAT++A+AVLR A
Sbjct: 401  YFRAATLLAVAVLRLA 416


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