BLASTX nr result

ID: Coptis24_contig00004996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004996
         (1325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243...   213   7e-53
ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group] g...   209   1e-51
gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indi...   209   1e-51
ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824...   207   4e-51
ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778...   206   8e-51

>ref|XP_002285794.1| PREDICTED: uncharacterized protein LOC100243776 [Vitis vinifera]
            gi|302141951|emb|CBI19154.3| unnamed protein product
            [Vitis vinifera]
          Length = 257

 Score =  213 bits (543), Expect = 7e-53
 Identities = 102/112 (91%), Positives = 108/112 (96%)
 Frame = -1

Query: 1145 MSHFGRTGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 966
            MSHFGR+GPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1    MSHFGRSGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDVFIPRDRRTGDSRGFA 60

Query: 965  FVRYKYGEEAQKAVERLDGRNVDGRDIMVQFAKYGPNAEPIKKGRVIETSPK 810
            FVRYKY +EAQKAVE+LDGRNVDGR+IMVQFAKYGPNAE I KGR+IETS K
Sbjct: 61   FVRYKYADEAQKAVEKLDGRNVDGREIMVQFAKYGPNAERIHKGRIIETSSK 112


>ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
            gi|42408182|dbj|BAD09319.1| putative splicing factor,
            arginine/serine-rich [Oryza sativa Japonica Group]
            gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa
            Japonica Group] gi|215693774|dbj|BAG88973.1| unnamed
            protein product [Oryza sativa Japonica Group]
            gi|215737273|dbj|BAG96202.1| unnamed protein product
            [Oryza sativa Japonica Group]
          Length = 289

 Score =  209 bits (533), Expect = 1e-51
 Identities = 98/112 (87%), Positives = 108/112 (96%)
 Frame = -1

Query: 1145 MSHFGRTGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 966
            MSHFGR+GPPDIRDT+SLLVLNI+FRTTADDLFPLFD+YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1    MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFA 60

Query: 965  FVRYKYGEEAQKAVERLDGRNVDGRDIMVQFAKYGPNAEPIKKGRVIETSPK 810
            FVRYKY EEAQKA++RLDGRNVDGR+IMVQFAKYGPNAEPI+KGR+IE   K
Sbjct: 61   FVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRIIEEVEK 112


>gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
            gi|222640763|gb|EEE68895.1| hypothetical protein
            OsJ_27729 [Oryza sativa Japonica Group]
          Length = 298

 Score =  209 bits (533), Expect = 1e-51
 Identities = 98/112 (87%), Positives = 108/112 (96%)
 Frame = -1

Query: 1145 MSHFGRTGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 966
            MSHFGR+GPPDIRDT+SLLVLNI+FRTTADDLFPLFD+YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1    MSHFGRSGPPDIRDTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFA 60

Query: 965  FVRYKYGEEAQKAVERLDGRNVDGRDIMVQFAKYGPNAEPIKKGRVIETSPK 810
            FVRYKY EEAQKA++RLDGRNVDGR+IMVQFAKYGPNAEPI+KGR+IE   K
Sbjct: 61   FVRYKYAEEAQKAIDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRIIEEVEK 112


>ref|XP_003574673.1| PREDICTED: uncharacterized protein LOC100824108 [Brachypodium
            distachyon]
          Length = 283

 Score =  207 bits (528), Expect = 4e-51
 Identities = 98/112 (87%), Positives = 107/112 (95%)
 Frame = -1

Query: 1145 MSHFGRTGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 966
            MSHFGR GPPDIRDT+SLLVLNI+FRTTADDL+PLFD+YGKVVD+FIPRDRRTGDSRGFA
Sbjct: 1    MSHFGRAGPPDIRDTFSLLVLNISFRTTADDLYPLFDRYGKVVDVFIPRDRRTGDSRGFA 60

Query: 965  FVRYKYGEEAQKAVERLDGRNVDGRDIMVQFAKYGPNAEPIKKGRVIETSPK 810
            FVRYKY +EAQKAV+RLDGRNVDGR+IMVQFAKYGPNAEPI+KGRVIE   K
Sbjct: 61   FVRYKYADEAQKAVDRLDGRNVDGRNIMVQFAKYGPNAEPIRKGRVIEEVEK 112


>ref|XP_003531034.1| PREDICTED: uncharacterized protein LOC100778928 [Glycine max]
          Length = 267

 Score =  206 bits (525), Expect = 8e-51
 Identities = 99/112 (88%), Positives = 106/112 (94%)
 Frame = -1

Query: 1145 MSHFGRTGPPDIRDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGDSRGFA 966
            MSHFGR+GPPDI DTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIP+DRRTG+SRGFA
Sbjct: 1    MSHFGRSGPPDISDTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPKDRRTGESRGFA 60

Query: 965  FVRYKYGEEAQKAVERLDGRNVDGRDIMVQFAKYGPNAEPIKKGRVIETSPK 810
            FVRYKY +EAQKAVERLDGR VDGR+I VQFAKYGPNAE I KGR+IETSP+
Sbjct: 61   FVRYKYADEAQKAVERLDGRMVDGREITVQFAKYGPNAERIHKGRIIETSPR 112


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