BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004994
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus ...   342   4e-92
ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus ...   342   6e-92
ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   340   1e-91
ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   338   5e-91
ref|XP_004150161.1| PREDICTED: 60S ribosomal protein L6-like [Cu...   338   6e-91

>ref|XP_002513192.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223547690|gb|EEF49183.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 233

 Score =  342 bits (877), Expect = 4e-92
 Identities = 175/231 (75%), Positives = 190/231 (82%), Gaps = 2/231 (0%)
 Frame = -1

Query: 689 MALKARV--TSRNPDLIRGIGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLLESKPTEK 516
           MA K R    +RNPDL+RGIGKYSRS+MYHKRGLWAIKAKNGGVFP+HD K   + P EK
Sbjct: 1   MAPKTRTPKVNRNPDLVRGIGKYSRSQMYHKRGLWAIKAKNGGVFPKHDPKPKPAAPAEK 60

Query: 515 PPKFYPADDVKKPFVNKRKHQPTKLRPSITPGTVLIILAGRFQGKRVVFLNQLSSGLLLV 336
           PPKFYPADDVKKP +NKRK +PTKLR SITPGTVLIILAGRF+GKRVVFL QLSSGLLL+
Sbjct: 61  PPKFYPADDVKKPLLNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLI 120

Query: 335 TGPFKINGVPLRRVNQSYVIGTSTKVDISGLNIEXXXXXXXXXXXXXXXXXXXGEFLEAD 156
           TGPFKINGVPLRRVNQSYVI TSTKVDISG+N++                   GEF EA+
Sbjct: 121 TGPFKINGVPLRRVNQSYVIATSTKVDISGVNVDKFDDKFFAKQAEKKKKKGEGEFFEAE 180

Query: 155 KEEKNVLPQEKKDDQKAVDALLIKSIEGVPELKTYLAARFSLKSGMKPHEL 3
           K+EKNVLPQEKKDDQK VDA LIKSIE VPELK YLAARFSLK+GMKPHEL
Sbjct: 181 KDEKNVLPQEKKDDQKTVDAALIKSIEAVPELKAYLAARFSLKAGMKPHEL 231


>ref|XP_002524802.1| 60S ribosomal protein L6, putative [Ricinus communis]
           gi|223535986|gb|EEF37645.1| 60S ribosomal protein L6,
           putative [Ricinus communis]
          Length = 231

 Score =  342 bits (876), Expect = 6e-92
 Identities = 175/229 (76%), Positives = 188/229 (82%)
 Frame = -1

Query: 689 MALKARVTSRNPDLIRGIGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLLESKPTEKPP 510
           MA K    SRNP+L+RGIGKYSRS+MYHKRGLWAIKAKNGGVFP+HD K   + P EKPP
Sbjct: 1   MAPKTPRISRNPNLVRGIGKYSRSQMYHKRGLWAIKAKNGGVFPKHDPKPKPASPAEKPP 60

Query: 509 KFYPADDVKKPFVNKRKHQPTKLRPSITPGTVLIILAGRFQGKRVVFLNQLSSGLLLVTG 330
           KFYPADD+KKP  NKRK +PTKLR SITPGTVLIILAGRF+GKRVVFL QLSSGLLLVTG
Sbjct: 61  KFYPADDIKKPLHNKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTG 120

Query: 329 PFKINGVPLRRVNQSYVIGTSTKVDISGLNIEXXXXXXXXXXXXXXXXXXXGEFLEADKE 150
           PFKINGVPLRRVNQSYVI TSTKVDISG+N +                   GEF EA+KE
Sbjct: 121 PFKINGVPLRRVNQSYVIATSTKVDISGVNADKFDDKYFAKQAEKRKKKGEGEFFEAEKE 180

Query: 149 EKNVLPQEKKDDQKAVDALLIKSIEGVPELKTYLAARFSLKSGMKPHEL 3
           EKNVLPQEKKDDQK +DA LIKSIEGVPELK YLAARFSLK+GMKPHEL
Sbjct: 181 EKNVLPQEKKDDQKTLDAALIKSIEGVPELKAYLAARFSLKAGMKPHEL 229


>ref|XP_004154716.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  340 bits (873), Expect = 1e-91
 Identities = 173/229 (75%), Positives = 187/229 (81%)
 Frame = -1

Query: 689 MALKARVTSRNPDLIRGIGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLLESKPTEKPP 510
           MA K    SRNP+LIRG+GKYSRSKMYHKRGLWAIKAKNGGVFPRHDAK     P EKPP
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60

Query: 509 KFYPADDVKKPFVNKRKHQPTKLRPSITPGTVLIILAGRFQGKRVVFLNQLSSGLLLVTG 330
           KFYPADDVKKP VNKRK +PTKLR SITPGTVLIIL GRF+GKRVVFL QL SGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 329 PFKINGVPLRRVNQSYVIGTSTKVDISGLNIEXXXXXXXXXXXXXXXXXXXGEFLEADKE 150
           PFK+NGVPLRRVNQSYVI TSTKVDI+G+N+E                   GEF EA+KE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180

Query: 149 EKNVLPQEKKDDQKAVDALLIKSIEGVPELKTYLAARFSLKSGMKPHEL 3
           EK+ LPQEKKDDQKAVD+ L+KSIE V +LKTYLAARFSLK+GMKPHEL
Sbjct: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHEL 229


>ref|XP_004149609.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
           gi|449533212|ref|XP_004173570.1| PREDICTED: 60S
           ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  338 bits (868), Expect = 5e-91
 Identities = 172/229 (75%), Positives = 187/229 (81%)
 Frame = -1

Query: 689 MALKARVTSRNPDLIRGIGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLLESKPTEKPP 510
           MA K    SRNPDLIRG+GKYSRSKMYHKRGLWAIKAKNGGVFPRHDAK     P EKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 509 KFYPADDVKKPFVNKRKHQPTKLRPSITPGTVLIILAGRFQGKRVVFLNQLSSGLLLVTG 330
           KFYPADDVKKP VNKRK +PTKLR SITPGTVLIIL GRF+GKRVVFL QL SGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 329 PFKINGVPLRRVNQSYVIGTSTKVDISGLNIEXXXXXXXXXXXXXXXXXXXGEFLEADKE 150
           PFK+NGVPLRRVNQSYVI TSTKVDI+G+++E                   GEF EA+KE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 149 EKNVLPQEKKDDQKAVDALLIKSIEGVPELKTYLAARFSLKSGMKPHEL 3
           EK+ LPQ+KKDDQKAVD+ L+KSIE V +LKTYLAARFSLK+GMKPHEL
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHEL 229


>ref|XP_004150161.1| PREDICTED: 60S ribosomal protein L6-like [Cucumis sativus]
          Length = 231

 Score =  338 bits (867), Expect = 6e-91
 Identities = 172/229 (75%), Positives = 186/229 (81%)
 Frame = -1

Query: 689 MALKARVTSRNPDLIRGIGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKLLESKPTEKPP 510
           MA K    SRNP+LIRG+GKYSRSKMYHKRGLWAIKAKNGGVFPRHDAK     P EKPP
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60

Query: 509 KFYPADDVKKPFVNKRKHQPTKLRPSITPGTVLIILAGRFQGKRVVFLNQLSSGLLLVTG 330
           KFYPADDVKKP VNKRK +PTKLR SITPGTVLIIL GRF+GKRVVFL QL  GLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPFGLLLVTG 120

Query: 329 PFKINGVPLRRVNQSYVIGTSTKVDISGLNIEXXXXXXXXXXXXXXXXXXXGEFLEADKE 150
           PFK+NGVPLRRVNQSYVI TSTKVDI+G+N+E                   GEF EA+KE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180

Query: 149 EKNVLPQEKKDDQKAVDALLIKSIEGVPELKTYLAARFSLKSGMKPHEL 3
           EK+ LPQEKKDDQKAVD+ L+KSIE V +LKTYLAARFSLK+GMKPHEL
Sbjct: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHEL 229