BLASTX nr result

ID: Coptis24_contig00004990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004990
         (502 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27914.3| unnamed protein product [Vitis vinifera]              272   2e-71
ref|XP_002282186.1| PREDICTED: angio-associated migratory cell p...   272   2e-71
ref|XP_004162166.1| PREDICTED: vegetative incompatibility protei...   267   7e-70
ref|XP_004138371.1| PREDICTED: vegetative incompatibility protei...   267   7e-70
ref|XP_002327217.1| predicted protein [Populus trichocarpa] gi|2...   267   7e-70

>emb|CBI27914.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  272 bits (695), Expect = 2e-71
 Identities = 119/155 (76%), Positives = 138/155 (89%)
 Frame = -2

Query: 501 VWDAYSGSHKCTLAGPSDGVEWVRWHPRGYVVLAGSEDSTAWMWNGDKNVFLNMFSGHSS 322
           +WDA SG  KCTL GP  G+EWVRWHPRG+VVLAGSED T WMWN D+  +LNMFSGH+S
Sbjct: 132 IWDASSGDLKCTLEGPGGGIEWVRWHPRGHVVLAGSEDCTVWMWNADRGAYLNMFSGHAS 191

Query: 321 TVTCGDFTPDGKMVCTGSEDASLRIWNPRNGECVHVVRDHPYHTEGLTCLAITSDSTLAI 142
           +VTCGDFTPDGK +CTGS+DA+LRIWNP +GE +HVVR HPYHTEGLTCLAITSDSTLA+
Sbjct: 192 SVTCGDFTPDGKTICTGSDDATLRIWNPSSGENIHVVRGHPYHTEGLTCLAITSDSTLAL 251

Query: 141 TGSKDNSVHIVNITTGRVVNSLLAHTSSIECVGLS 37
           TGSKD+SVH+VNITTG+VV+SL +HT SIEC+GLS
Sbjct: 252 TGSKDSSVHVVNITTGKVVSSLTSHTDSIECIGLS 286


>ref|XP_002282186.1| PREDICTED: angio-associated migratory cell protein-like [Vitis
           vinifera]
          Length = 391

 Score =  272 bits (695), Expect = 2e-71
 Identities = 119/155 (76%), Positives = 138/155 (89%)
 Frame = -2

Query: 501 VWDAYSGSHKCTLAGPSDGVEWVRWHPRGYVVLAGSEDSTAWMWNGDKNVFLNMFSGHSS 322
           +WDA SG  KCTL GP  G+EWVRWHPRG+VVLAGSED T WMWN D+  +LNMFSGH+S
Sbjct: 130 IWDASSGDLKCTLEGPGGGIEWVRWHPRGHVVLAGSEDCTVWMWNADRGAYLNMFSGHAS 189

Query: 321 TVTCGDFTPDGKMVCTGSEDASLRIWNPRNGECVHVVRDHPYHTEGLTCLAITSDSTLAI 142
           +VTCGDFTPDGK +CTGS+DA+LRIWNP +GE +HVVR HPYHTEGLTCLAITSDSTLA+
Sbjct: 190 SVTCGDFTPDGKTICTGSDDATLRIWNPSSGENIHVVRGHPYHTEGLTCLAITSDSTLAL 249

Query: 141 TGSKDNSVHIVNITTGRVVNSLLAHTSSIECVGLS 37
           TGSKD+SVH+VNITTG+VV+SL +HT SIEC+GLS
Sbjct: 250 TGSKDSSVHVVNITTGKVVSSLTSHTDSIECIGLS 284


>ref|XP_004162166.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Cucumis
           sativus]
          Length = 392

 Score =  267 bits (682), Expect = 7e-70
 Identities = 114/155 (73%), Positives = 140/155 (90%)
 Frame = -2

Query: 501 VWDAYSGSHKCTLAGPSDGVEWVRWHPRGYVVLAGSEDSTAWMWNGDKNVFLNMFSGHSS 322
           +WD  SG+ KCTL GP  G+EWVRWHPRG++VLAGSEDSTAWMWN D+ ++LN+FSGH +
Sbjct: 131 IWDTSSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSTAWMWNADRGIYLNIFSGHGA 190

Query: 321 TVTCGDFTPDGKMVCTGSEDASLRIWNPRNGECVHVVRDHPYHTEGLTCLAITSDSTLAI 142
           +VTCGDFTPDGK++CTGS+DA++RIWNPR+GE +HVVR HPYHTEGLT LA+TSDSTLA+
Sbjct: 191 SVTCGDFTPDGKIICTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLTSLALTSDSTLAL 250

Query: 141 TGSKDNSVHIVNITTGRVVNSLLAHTSSIECVGLS 37
           TGSKD SVHIVNI TG+VVNSL++H+ SIEC+GL+
Sbjct: 251 TGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLA 285



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 3/161 (1%)
 Frame = -2

Query: 501 VWDAYSGSHKCTLAGP---SDGVEWVRWHPRGYVVLAGSEDSTAWMWNGDKNVFLNMFSG 331
           +W+  SG +   + G    ++G+  +       + L GS+D +  + N      +N    
Sbjct: 215 IWNPRSGENIHVVRGHPYHTEGLTSLALTSDSTLALTGSKDGSVHIVNIATGKVVNSLVS 274

Query: 330 HSSTVTCGDFTPDGKMVCTGSEDASLRIWNPRNGECVHVVRDHPYHTEGLTCLAITSDST 151
           HS ++ C    P      TG  D  L IW+ +        R    H +G+TCL     S 
Sbjct: 275 HSDSIECIGLAPSSPWAATGGMDQKLIIWDLQQS----TPRSTCQHEDGVTCLTWIGTSR 330

Query: 150 LAITGSKDNSVHIVNITTGRVVNSLLAHTSSIECVGLSQRL 28
              TG  D  V I +  +G  V +   H+ +I+ + +   L
Sbjct: 331 YLATGCVDGRVRIWDSLSGECVKTFSGHSDAIQSLAVCANL 371


>ref|XP_004138371.1| PREDICTED: vegetative incompatibility protein HET-E-1-like [Cucumis
           sativus]
          Length = 392

 Score =  267 bits (682), Expect = 7e-70
 Identities = 114/155 (73%), Positives = 140/155 (90%)
 Frame = -2

Query: 501 VWDAYSGSHKCTLAGPSDGVEWVRWHPRGYVVLAGSEDSTAWMWNGDKNVFLNMFSGHSS 322
           +WD  SG+ KCTL GP  G+EWVRWHPRG++VLAGSEDSTAWMWN D+ ++LN+FSGH +
Sbjct: 131 IWDTSSGNLKCTLEGPGGGIEWVRWHPRGHLVLAGSEDSTAWMWNADRGIYLNIFSGHGA 190

Query: 321 TVTCGDFTPDGKMVCTGSEDASLRIWNPRNGECVHVVRDHPYHTEGLTCLAITSDSTLAI 142
           +VTCGDFTPDGK++CTGS+DA++RIWNPR+GE +HVVR HPYHTEGLT LA+TSDSTLA+
Sbjct: 191 SVTCGDFTPDGKIICTGSDDATMRIWNPRSGENIHVVRGHPYHTEGLTSLALTSDSTLAL 250

Query: 141 TGSKDNSVHIVNITTGRVVNSLLAHTSSIECVGLS 37
           TGSKD SVHIVNI TG+VVNSL++H+ SIEC+GL+
Sbjct: 251 TGSKDGSVHIVNIATGKVVNSLVSHSDSIECIGLA 285



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 3/161 (1%)
 Frame = -2

Query: 501 VWDAYSGSHKCTLAGP---SDGVEWVRWHPRGYVVLAGSEDSTAWMWNGDKNVFLNMFSG 331
           +W+  SG +   + G    ++G+  +       + L GS+D +  + N      +N    
Sbjct: 215 IWNPRSGENIHVVRGHPYHTEGLTSLALTSDSTLALTGSKDGSVHIVNIATGKVVNSLVS 274

Query: 330 HSSTVTCGDFTPDGKMVCTGSEDASLRIWNPRNGECVHVVRDHPYHTEGLTCLAITSDST 151
           HS ++ C    P      TG  D  L IW+ +        R    H +G+TCL     S 
Sbjct: 275 HSDSIECIGLAPSSPWAATGGMDQKLIIWDLQQS----TPRSTCQHEDGVTCLTWIGTSR 330

Query: 150 LAITGSKDNSVHIVNITTGRVVNSLLAHTSSIECVGLSQRL 28
              TG  D  V I +  +G  V +   H+ +I+ + +   L
Sbjct: 331 YLATGCVDGRVRIWDSLSGECVKTFSGHSDAIQSLAVCANL 371


>ref|XP_002327217.1| predicted protein [Populus trichocarpa] gi|222835587|gb|EEE74022.1|
           predicted protein [Populus trichocarpa]
          Length = 378

 Score =  267 bits (682), Expect = 7e-70
 Identities = 114/155 (73%), Positives = 139/155 (89%)
 Frame = -2

Query: 501 VWDAYSGSHKCTLAGPSDGVEWVRWHPRGYVVLAGSEDSTAWMWNGDKNVFLNMFSGHSS 322
           +WDA SG+ KC L GP +G+EWVRWHP+G++VLAGSED T WMWN DK  +LN F+GH +
Sbjct: 117 IWDASSGNLKCVLEGPDEGIEWVRWHPKGHLVLAGSEDKTVWMWNADKGAYLNSFAGHEA 176

Query: 321 TVTCGDFTPDGKMVCTGSEDASLRIWNPRNGECVHVVRDHPYHTEGLTCLAITSDSTLAI 142
           +VTCGDFTPDGK +CTGS+DASLRIWNP++GE +HVVR HPYHT+GLTCLA++SDSTLAI
Sbjct: 177 SVTCGDFTPDGKTICTGSDDASLRIWNPKSGENIHVVRGHPYHTDGLTCLALSSDSTLAI 236

Query: 141 TGSKDNSVHIVNITTGRVVNSLLAHTSSIECVGLS 37
           TGSKDNSVHIVNITTGRVV+SL++H+ S+ECVGL+
Sbjct: 237 TGSKDNSVHIVNITTGRVVSSLVSHSDSVECVGLA 271



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 36/158 (22%), Positives = 67/158 (42%), Gaps = 3/158 (1%)
 Frame = -2

Query: 501 VWDAYSGSHKCTLAGP---SDGVEWVRWHPRGYVVLAGSEDSTAWMWNGDKNVFLNMFSG 331
           +W+  SG +   + G    +DG+  +       + + GS+D++  + N      ++    
Sbjct: 201 IWNPKSGENIHVVRGHPYHTDGLTCLALSSDSTLAITGSKDNSVHIVNITTGRVVSSLVS 260

Query: 330 HSSTVTCGDFTPDGKMVCTGSEDASLRIWNPRNGECVHVVRDHPYHTEGLTCLAITSDST 151
           HS +V C    P      TG  D  L IW+ ++     + R    H +G+TCLA    S 
Sbjct: 261 HSDSVECVGLAPSSPWAATGGLDQKLIIWDLQHS----LPRASCEHKDGVTCLAWLGASR 316

Query: 150 LAITGSKDNSVHIVNITTGRVVNSLLAHTSSIECVGLS 37
              TG  D  V + +  +G  +     H  +++ + +S
Sbjct: 317 YVATGCVDGKVRLWDSLSGDCIRIFSGHADAVQSLSIS 354


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