BLASTX nr result

ID: Coptis24_contig00004987 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004987
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29912.3| unnamed protein product [Vitis vinifera]              404   e-110
ref|XP_002282707.1| PREDICTED: uncharacterized protein C4orf29 h...   404   e-110
ref|XP_003554192.1| PREDICTED: uncharacterized protein C4orf29 h...   400   e-109
ref|XP_004136580.1| PREDICTED: uncharacterized protein C4orf29 h...   398   e-109
ref|XP_002532397.1| conserved hypothetical protein [Ricinus comm...   398   e-109

>emb|CBI29912.3| unnamed protein product [Vitis vinifera]
          Length = 314

 Score =  404 bits (1038), Expect = e-110
 Identities = 194/240 (80%), Positives = 214/240 (89%)
 Frame = +1

Query: 58  CLIQDVSGTGDHTFERRLRLGGPLLKQNIATMVLESPFYGKRRPMLQRGSKXXXXXXXXX 237
           C++  ++GTGDHTFERRLRLGGPLLK+NIATMVLESPFYG+RRP+LQRG+K         
Sbjct: 74  CVVH-LAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPVLQRGAKLLCVSDLLL 132

Query: 238 XGSATIEEARSLLYWLDNEEGFGKTGVCGLSMGGVHAAMVGSLHPTPIATLPFLSPHSAA 417
            G ATIEEARSLL+WLD+E GFGK GVCGLSMGGVHAAMVGSLHPTP+ATLPFLSPHSA 
Sbjct: 133 LGRATIEEARSLLHWLDSEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAV 192

Query: 418 VAFCEGILRHATAWNVLKEDGGIQKSSMTLEEVRERMRTVLSLTDVTRFPVPKNPESVIF 597
           VAFCEGIL+HATAW  L+ED  +QK++MTLE+VRERMR VLSLTDVTRFP+PKNP +VIF
Sbjct: 193 VAFCEGILKHATAWEALREDLAVQKAAMTLEDVRERMRNVLSLTDVTRFPIPKNPNAVIF 252

Query: 598 VGATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNNEFRRAIVDALDRLPWKES 777
           V ATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSF+LHN EFRRAIVD LDRL WKES
Sbjct: 253 VAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFILHNGEFRRAIVDGLDRLQWKES 312


>ref|XP_002282707.1| PREDICTED: uncharacterized protein C4orf29 homolog [Vitis vinifera]
           gi|147852945|emb|CAN81264.1| hypothetical protein
           VITISV_030682 [Vitis vinifera]
          Length = 359

 Score =  404 bits (1038), Expect = e-110
 Identities = 194/240 (80%), Positives = 214/240 (89%)
 Frame = +1

Query: 58  CLIQDVSGTGDHTFERRLRLGGPLLKQNIATMVLESPFYGKRRPMLQRGSKXXXXXXXXX 237
           C++  ++GTGDHTFERRLRLGGPLLK+NIATMVLESPFYG+RRP+LQRG+K         
Sbjct: 119 CVVH-LAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPVLQRGAKLLCVSDLLL 177

Query: 238 XGSATIEEARSLLYWLDNEEGFGKTGVCGLSMGGVHAAMVGSLHPTPIATLPFLSPHSAA 417
            G ATIEEARSLL+WLD+E GFGK GVCGLSMGGVHAAMVGSLHPTP+ATLPFLSPHSA 
Sbjct: 178 LGRATIEEARSLLHWLDSEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAV 237

Query: 418 VAFCEGILRHATAWNVLKEDGGIQKSSMTLEEVRERMRTVLSLTDVTRFPVPKNPESVIF 597
           VAFCEGIL+HATAW  L+ED  +QK++MTLE+VRERMR VLSLTDVTRFP+PKNP +VIF
Sbjct: 238 VAFCEGILKHATAWEALREDLAVQKAAMTLEDVRERMRNVLSLTDVTRFPIPKNPNAVIF 297

Query: 598 VGATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNNEFRRAIVDALDRLPWKES 777
           V ATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSF+LHN EFRRAIVD LDRL WKES
Sbjct: 298 VAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFILHNGEFRRAIVDGLDRLQWKES 357


>ref|XP_003554192.1| PREDICTED: uncharacterized protein C4orf29 homolog [Glycine max]
          Length = 353

 Score =  400 bits (1029), Expect = e-109
 Identities = 193/242 (79%), Positives = 213/242 (88%)
 Frame = +1

Query: 58  CLIQDVSGTGDHTFERRLRLGGPLLKQNIATMVLESPFYGKRRPMLQRGSKXXXXXXXXX 237
           C++  ++GTGDHTFERRLRLGGPL+K+NIATMVLESPFYG+RRP+LQRG+K         
Sbjct: 113 CVVH-LAGTGDHTFERRLRLGGPLMKENIATMVLESPFYGQRRPVLQRGAKLLCVSDLLL 171

Query: 238 XGSATIEEARSLLYWLDNEEGFGKTGVCGLSMGGVHAAMVGSLHPTPIATLPFLSPHSAA 417
            G ATIEEARSLL+WLD+E GFGK GVCGLSMGGVHAAMVGSLHPTP+ATLPFLSPHSA 
Sbjct: 172 LGRATIEEARSLLHWLDSEAGFGKMGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAV 231

Query: 418 VAFCEGILRHATAWNVLKEDGGIQKSSMTLEEVRERMRTVLSLTDVTRFPVPKNPESVIF 597
           VAFCEGIL+H TAW  L++D   QK +MTLEEVRERMR VLSLTDVTRFP+PKNP +VIF
Sbjct: 232 VAFCEGILKHGTAWEALRKDLAAQKVAMTLEEVRERMRNVLSLTDVTRFPIPKNPNAVIF 291

Query: 598 VGATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNNEFRRAIVDALDRLPWKES 777
           V ATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSF+LHN+EFRRAI D LDRLPWKES
Sbjct: 292 VAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFILHNDEFRRAIKDGLDRLPWKES 351

Query: 778 TL 783
            L
Sbjct: 352 HL 353


>ref|XP_004136580.1| PREDICTED: uncharacterized protein C4orf29 homolog [Cucumis
           sativus] gi|449515482|ref|XP_004164778.1| PREDICTED:
           uncharacterized protein C4orf29 homolog [Cucumis
           sativus]
          Length = 360

 Score =  398 bits (1023), Expect = e-109
 Identities = 193/247 (78%), Positives = 214/247 (86%)
 Frame = +1

Query: 43  TIPIQCLIQDVSGTGDHTFERRLRLGGPLLKQNIATMVLESPFYGKRRPMLQRGSKXXXX 222
           T  + C++  ++GTGDH+FERRLRLGGPLLK NIATMVLESPFYG+RRP+LQ G+K    
Sbjct: 115 THKMSCVVH-LAGTGDHSFERRLRLGGPLLKDNIATMVLESPFYGQRRPILQHGAKLLCV 173

Query: 223 XXXXXXGSATIEEARSLLYWLDNEEGFGKTGVCGLSMGGVHAAMVGSLHPTPIATLPFLS 402
                 G ATIEEARSLL+WLD+E GFGK GVCGLSMGGVHAAMVGSLHPTPIATLPFLS
Sbjct: 174 SDLLLLGRATIEEARSLLHWLDSEAGFGKMGVCGLSMGGVHAAMVGSLHPTPIATLPFLS 233

Query: 403 PHSAAVAFCEGILRHATAWNVLKEDGGIQKSSMTLEEVRERMRTVLSLTDVTRFPVPKNP 582
           PHSA VAFCEGIL+H TAW  L+ D G+Q+S+MTLEEVRERMR VLSLTDVTRFP+PKNP
Sbjct: 234 PHSAVVAFCEGILKHGTAWEALRNDLGLQQSAMTLEEVRERMRNVLSLTDVTRFPIPKNP 293

Query: 583 ESVIFVGATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNNEFRRAIVDALDRL 762
            +VI V ATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSF+LHN+EFRRAIVD LDRL
Sbjct: 294 NAVILVAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFILHNDEFRRAIVDGLDRL 353

Query: 763 PWKESTL 783
            W+ES L
Sbjct: 354 EWRESPL 360


>ref|XP_002532397.1| conserved hypothetical protein [Ricinus communis]
           gi|223527893|gb|EEF29982.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 243

 Score =  398 bits (1023), Expect = e-109
 Identities = 192/240 (80%), Positives = 212/240 (88%)
 Frame = +1

Query: 58  CLIQDVSGTGDHTFERRLRLGGPLLKQNIATMVLESPFYGKRRPMLQRGSKXXXXXXXXX 237
           C++  ++GTGDHTFERRLRLGGPLLK+NIATMVLESPFYG+RRPMLQ G+K         
Sbjct: 3   CVVH-LAGTGDHTFERRLRLGGPLLKENIATMVLESPFYGQRRPMLQTGAKLLCVSDLLL 61

Query: 238 XGSATIEEARSLLYWLDNEEGFGKTGVCGLSMGGVHAAMVGSLHPTPIATLPFLSPHSAA 417
            G ATI+EARSLL+WLD E GFGKTGVCGLSMGGVHAAMVGSLHPTP+ATLPFLSPHSAA
Sbjct: 62  LGRATIDEARSLLHWLDCEAGFGKTGVCGLSMGGVHAAMVGSLHPTPVATLPFLSPHSAA 121

Query: 418 VAFCEGILRHATAWNVLKEDGGIQKSSMTLEEVRERMRTVLSLTDVTRFPVPKNPESVIF 597
           VAFCEGILRH TAW  L+ED  +QK+++TL+EV+ERMR VLSLTDVTRFP+PKNP +VIF
Sbjct: 122 VAFCEGILRHGTAWEALREDLAVQKAAITLQEVQERMRNVLSLTDVTRFPIPKNPNAVIF 181

Query: 598 VGATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNNEFRRAIVDALDRLPWKES 777
           V ATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHN EFR+AIVD L RL WKES
Sbjct: 182 VAATDDGYIPKHSVLELQKAWPGSEVRWVTGGHVSSFLLHNGEFRKAIVDGLSRLEWKES 241


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