BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004980
         (277 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis p...   165   4e-39
ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis p...   164   5e-39
ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis p...   157   8e-37
ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis p...   157   8e-37
gb|ADE76484.1| unknown [Picea sitchensis]                             157   8e-37

>ref|XP_002273010.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera]
          Length = 187

 Score =  165 bits (417), Expect = 4e-39
 Identities = 78/91 (85%), Positives = 84/91 (92%)
 Frame = +3

Query: 3   TNISREKLISLGTCIGKFTKGGKFHLTIQCLNLLADNAKHKVWLKPSSEMSFLYGNHVLK 182
           TNI R +L+SLGTCIGKFTKGGKFHLT+Q +NLLA NAKHKVWLKP+SEMSFLYGNHVLK
Sbjct: 64  TNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNHVLK 123

Query: 183 GGLGRITENTSTGDGVVVFSMSDVPLGFGVA 275
           GGLGRITEN   GDGVVVFSMSDVPLGFG+A
Sbjct: 124 GGLGRITENIVAGDGVVVFSMSDVPLGFGIA 154


>ref|XP_002279785.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Vitis vinifera] gi|147783622|emb|CAN68143.1|
           hypothetical protein VITISV_035660 [Vitis vinifera]
          Length = 187

 Score =  164 bits (416), Expect = 5e-39
 Identities = 77/91 (84%), Positives = 84/91 (92%)
 Frame = +3

Query: 3   TNISREKLISLGTCIGKFTKGGKFHLTIQCLNLLADNAKHKVWLKPSSEMSFLYGNHVLK 182
           TNI R +L+SLGTCIGKFTKGGKFHLT+Q +NLLA NAKHKVWLKP+SEMSFLYGNHVLK
Sbjct: 64  TNIGRAQLVSLGTCIGKFTKGGKFHLTVQSVNLLAANAKHKVWLKPTSEMSFLYGNHVLK 123

Query: 183 GGLGRITENTSTGDGVVVFSMSDVPLGFGVA 275
           GGLGRITEN   GDG+VVFSMSDVPLGFG+A
Sbjct: 124 GGLGRITENIVAGDGIVVFSMSDVPLGFGIA 154


>ref|XP_004159812.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  157 bits (397), Expect = 8e-37
 Identities = 73/91 (80%), Positives = 81/91 (89%)
 Frame = +3

Query: 3   TNISREKLISLGTCIGKFTKGGKFHLTIQCLNLLADNAKHKVWLKPSSEMSFLYGNHVLK 182
           TN++R  L+SLGTCIGKFT GG FHLT+Q L LL+ NAKHKVWLKP+SEMSFLYGNHVLK
Sbjct: 64  TNVARSNLVSLGTCIGKFTHGGSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLYGNHVLK 123

Query: 183 GGLGRITENTSTGDGVVVFSMSDVPLGFGVA 275
           GGLGRITEN   GDGVVV+SMSDVPLGFG+A
Sbjct: 124 GGLGRITENIVPGDGVVVYSMSDVPLGFGIA 154


>ref|XP_004134205.1| PREDICTED: 60S ribosome subunit biogenesis protein NIP7 homolog
           [Cucumis sativus]
          Length = 187

 Score =  157 bits (397), Expect = 8e-37
 Identities = 73/91 (80%), Positives = 81/91 (89%)
 Frame = +3

Query: 3   TNISREKLISLGTCIGKFTKGGKFHLTIQCLNLLADNAKHKVWLKPSSEMSFLYGNHVLK 182
           TN++R  L+SLGTCIGKFT GG FHLT+Q L LL+ NAKHKVWLKP+SEMSFLYGNHVLK
Sbjct: 64  TNVARSNLVSLGTCIGKFTHGGSFHLTVQSLGLLSPNAKHKVWLKPTSEMSFLYGNHVLK 123

Query: 183 GGLGRITENTSTGDGVVVFSMSDVPLGFGVA 275
           GGLGRITEN   GDGVVV+SMSDVPLGFG+A
Sbjct: 124 GGLGRITENIVPGDGVVVYSMSDVPLGFGIA 154


>gb|ADE76484.1| unknown [Picea sitchensis]
          Length = 188

 Score =  157 bits (397), Expect = 8e-37
 Identities = 75/91 (82%), Positives = 84/91 (92%)
 Frame = +3

Query: 3   TNISREKLISLGTCIGKFTKGGKFHLTIQCLNLLADNAKHKVWLKPSSEMSFLYGNHVLK 182
           TNISRE+L+SLGTCIGKFTK GKF LTIQ L+LLA +AK K+WLKP+SEMSFLYGNHVLK
Sbjct: 65  TNISRERLVSLGTCIGKFTKSGKFQLTIQSLDLLAAHAKRKIWLKPTSEMSFLYGNHVLK 124

Query: 183 GGLGRITENTSTGDGVVVFSMSDVPLGFGVA 275
           GGLGRITENT+  +GVV+FSMSDVPLGFGVA
Sbjct: 125 GGLGRITENTAQNEGVVIFSMSDVPLGFGVA 155