BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004973
         (2510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98491.1| retrotransposon protein, putative, unclassified [...   560   e-157
gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-...   548   e-153
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo...   531   e-148
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   523   e-145
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...   522   e-145

>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score =  560 bits (1443), Expect = e-157
 Identities = 299/831 (35%), Positives = 464/831 (55%), Gaps = 16/831 (1%)
 Frame = -2

Query: 2497 LKSKLVELLEREASMWRQKSSQNWVKDYARNTKFFHISTVYRRRKNKIDKLKNEQGIWKK 2318
            L+ +L +L ++    W+Q++  NW+    RNT FFH S   RRR+N+I+KL+ E G W +
Sbjct: 577  LRYRLEKLEQQVDIYWKQRAHTNWLNKGDRNTSFFHASCSERRRRNRINKLRREDGSWVE 636

Query: 2317 GREEVSGVVNSFFTDLFSTDSPKTDSSILNLFKPVITSRENDILGKIPTDTEIWNVVKKL 2138
              E+   ++  FF  LF+++  +    +L++    ++   N+ L    T  E+   +  +
Sbjct: 637  REEDKRAMIIEFFKQLFTSNGGQNSQKLLDVVDRKVSGAMNESLRAEFTREEVKEALDAI 696

Query: 2137 HPLKAPGPDGFQGVFYQSCWDIVGPLITKTVKNFFLYNMLPPDLNETFITLIPKIPSPDH 1958
              LKAPGPDG    FY++CWD+VG  +T  V        +P   N+  I LIPK+  P+ 
Sbjct: 697  GDLKAPGPDGMPAGFYKACWDVVGEKVTDEVLEVLRGGAIPEGWNDITIVLIPKVKKPEL 756

Query: 1957 ISKFRPISLCNFTYKIISKLLANRLKALLHKIISPFQGAFVKGRFIGDNIGLASEIFHHM 1778
            I   RPISLCN  YK++SK+LANRLK +L  +ISP Q AFV GR I DNI +A E+ H+M
Sbjct: 757  IKDLRPISLCNVCYKLVSKVLANRLKKILPDVISPAQSAFVPGRLISDNILIADEMTHYM 816

Query: 1777 SRMEKKKQGWLALKLDMKKAFDRVEWQFLYQVFEKLGFSNKWIAMIRKCLETVSYRVLLN 1598
                  + G+ A KLDM KA+DRVEW FL+ +  KLGF   W+ +I KC+ TV+YR+ +N
Sbjct: 817  RNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMILKLGFHTDWVNLIMKCVSTVTYRIRVN 876

Query: 1597 GSPLSHILPQRGLRQGDPLSPYLFILVTEALSRLLGKAEEEKKLSGIKMRQNSPPINHLL 1418
            G       P RGLRQGDPLSPYLF+L  E  S LL K EEE +L GI++ Q +P ++HLL
Sbjct: 877  GELSESFSPGRGLRQGDPLSPYLFLLCAEGFSALLSKTEEEGRLHGIRICQGAPSVSHLL 936

Query: 1417 YADDLIVFSKASLNQASNMKEILGQYCSATGQEVNWMKSSAFFSRNVHQRHQKILLRKWK 1238
            +ADD ++  +A+  +A  ++ IL  Y   +GQ +N  KS+  FS N     ++ ++    
Sbjct: 937  FADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVMFSPNTSSLEKRAVMAALN 996

Query: 1237 VRRFMEKEKYLGVPILLGKKKGQDFEYLVDRLQKKVAGWKAKVLSQASRTTLVEAVGQTV 1058
            ++R    E+YLG+P+ +G+ + + F YL +R+ +++ GWK K+LS+A +  L++AV Q +
Sbjct: 997  MQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEKLLSRAGKEILIKAVAQAI 1056

Query: 1057 PIYAMGVYHLPTSICDKLDQINRDFWWNGNANSNAWHTLSWEKLCKAKMNGGLGFRRARD 878
            P +AMG + L   +CD++ ++   +WW+     N  H LSW KL   K  GGLGFR    
Sbjct: 1057 PTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWNKLTLPKNMGGLGFRDIYI 1116

Query: 877  MNMAMLAKHSWRMINDPDSIWAKTFRSLYQWEMISQDTSRKKKPT--SYFWKGVVKSMDS 704
             N+AMLAK  WR+I DPDS+ ++  R+ Y       D  R K+ +  SY W+ + K +  
Sbjct: 1117 FNLAMLAKQGWRLIQDPDSLCSRVLRAKY---FPLGDCFRPKQTSNVSYTWRSIQKGLRV 1173

Query: 703  VKEGYMWKLGDGNSIHTFTEPWLL--LNNKPIRLSDHVIDNFSFSAVDDSTHVSHLLEND 530
            ++ G +W++GDG+ I+ + +PW+    + KP+          +    +  T V  L++  
Sbjct: 1174 LQNGMIWRVGDGSKINIWADPWIPRGWSRKPM----------TPRGANLVTKVEELIDPY 1223

Query: 529  STYWNQDRLGELFPKPIVECINLKEVNPTSQDKLIWWRDSKGILTVKSAYKMLIRETEKG 350
            +  W++D L + F +  V  I    V+   +D L W  D++G  TVKSAYK+  RE E+ 
Sbjct: 1224 TGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAWHFDARGCFTVKSAYKVQ-REMER- 1281

Query: 349  ECSKSNCRTI-----------RRIWKLDIDAGTQLFLWKLYMGGLTTGDVLLRRKFKGDA 203
              S++ C  +           +++WKL +    + FLW++    L     L  R    D 
Sbjct: 1282 RASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDT 1341

Query: 202  SCSFCQKEIETDYHLFIGCEWARALWMGSILGQ-RMMQNEKKDVRAALDSL 53
             C  C +  E   HLF  C+  + +W    L + R M  ++   +  L S+
Sbjct: 1342 RCVMCGRYNEDAGHLFFKCKPVKKVWQALNLEELRSMLEQQTSGKNVLQSI 1392


>gb|AAG51783.1|AC079679_3 reverse transcriptase, putative; 16838-20266 [Arabidopsis thaliana]
          Length = 1142

 Score =  548 bits (1411), Expect = e-153
 Identities = 301/798 (37%), Positives = 434/798 (54%), Gaps = 3/798 (0%)
 Frame = -2

Query: 2509 KIQSLKSKLVELLEREASMWRQKSSQNWVKDYARNTKFFHISTVYRRRKNKIDKLKNEQG 2330
            +I  L  +L E    E   W QKS   W+K    N+KFFH  T  RR +N+I  L +E G
Sbjct: 101  EITELTLRLKEAYRDEEQYWYQKSRSLWMKLGDNNSKFFHALTKQRRARNRITGLHDENG 160

Query: 2329 IWKKGREEVSGVVNSFFTDLFSTDSPKTDSSILNLFKPVITSRENDILGKIPTDTEIWNV 2150
            IW    +++  +  S+F +LF+T +P+     L   + +IT R ND+L    T+ E+   
Sbjct: 161  IWSIEDDDIQNIAVSYFQNLFTTANPQVFDEALGEVQVLITDRINDLLTADATECEVRAA 220

Query: 2149 VKKLHPLKAPGPDGFQGVFYQSCWDIVGPLITKTVKNFFLYNMLPPDLNETFITLIPKIP 1970
            +  +HP KAPGPDG   +F+Q  W I+   +   V +F    +    LN T I LIPK  
Sbjct: 221  LFMIHPEKAPGPDGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLIPKTE 280

Query: 1969 SPDHISKFRPISLCNFTYKIISKLLANRLKALLHKIISPFQGAFVKGRFIGDNIGLASEI 1790
             P  +++ RPISLCN  YK+ISK+L  RLK +L  +IS  Q AFV GR I DNI +A E+
Sbjct: 281  RPTRMTELRPISLCNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNILIAQEM 340

Query: 1789 FHHMSRMEKKKQGWLALKLDMKKAFDRVEWQFLYQVFEKLGFSNKWIAMIRKCLETVSYR 1610
            FH +      K  ++A+K DM KA+D+VEW F+  +  K+GF  KWI+ I  C+ TV Y+
Sbjct: 341  FHGLRTNSSCKDKFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCITTVQYK 400

Query: 1609 VLLNGSPLSHILPQRGLRQGDPLSPYLFILVTEALSRLLGKAEEEKKLSGIKMRQNSPPI 1430
            VL+NG P   I+P+RGLRQGDPLSPYLFIL TE L   + KAE +  ++GIK+   SP +
Sbjct: 401  VLINGQPKGLIIPERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLITGIKVATPSPAV 460

Query: 1429 NHLLYADDLIVFSKASLNQASNMKEILGQYCSATGQEVNWMKSSAFFSRNVHQRHQKILL 1250
            +HLL+ADD + F KA+  Q   + EIL QY S +GQ++N+ KSS  F   V    +  + 
Sbjct: 461  SHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQINFSKSSIQFGHKVEDSIKADIK 520

Query: 1249 RKWKVRRFMEKEKYLGVPILLGKKKGQDFEYLVDRLQKKVAGWKAKVLSQASRTTLVEAV 1070
                +        YLG+P  LG  K + F ++ DRLQ ++ GW AK LS+  +  ++++V
Sbjct: 521  LILGIHNLGGMGSYLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSV 580

Query: 1069 GQTVPIYAMGVYHLPTSICDKLDQINRDFWWNGNANSNAWHTLSWEKLCKAKMNGGLGFR 890
              T+P Y M  + LP +I  KL      FWW+ N +S   H ++W+KLC +K +GGLGFR
Sbjct: 581  AATLPRYVMSCFRLPKAITSKLTSAVAKFWWSSNGDSRGMHWMAWDKLCSSKSDGGLGFR 640

Query: 889  RARDMNMAMLAKHSWRMINDPDSIWAKTFRSLYQWEMISQDTSRKKKPTSYFWKGVVKSM 710
               D N A+LAK  WR+I  PDS++AK F+  Y  +    D+ +   P SY W+ ++ + 
Sbjct: 641  NVDDFNSALLAKQLWRLITAPDSLFAKVFKGRYFRKSNPLDSIKSYSP-SYGWRSMISAR 699

Query: 709  DSVKEGYMWKLGDGNSIHTFTEPWLLLNNKPIRLSDHVIDNFSFSAVDDSTHVSHLLEND 530
              V +G + ++G G SI  + +PW+     P +        +  S VD S  V  L+++ 
Sbjct: 700  SLVYKGLIKRVGSGASISVWNDPWI-----PAQFPRPA--KYGGSIVDPSLKVKSLIDSR 752

Query: 529  STYWNQDRLGELFPKPIVECINLKEV-NPTSQDKLIWWRDSKGILTVKSAYKMLIRETEK 353
            S +WN D L ELF    V  I+   + NP  +D L W     G  TVKS Y     +  +
Sbjct: 753  SNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHFTKAGNYTVKSGYHTARLDLNE 812

Query: 352  GECSKSNCRTIRR--IWKLDIDAGTQLFLWKLYMGGLTTGDVLLRRKFKGDASCSFCQKE 179
            G        T  +  IWK+      + FLW++  G +   + L +R    D  C  C   
Sbjct: 813  GTTLIGPDLTTLKAYIWKVQCPPKLRHFLWQILSGCVPVSENLRKRGILCDKGCVSCGAS 872

Query: 178  IETDYHLFIGCEWARALW 125
             E+  H    C  AR +W
Sbjct: 873  EESINHTLFQCHPARQIW 890


>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
          Length = 1494

 Score =  531 bits (1369), Expect = e-148
 Identities = 283/801 (35%), Positives = 449/801 (56%), Gaps = 8/801 (0%)
 Frame = -2

Query: 2506 IQSLKSKLVELLEREASMWRQKSSQNWVKDYARNTKFFHISTVYRRRKNKIDKLKNEQGI 2327
            +  LK  L ELL RE   W+Q+S   W+K+  RNT++FH+   +R RKN I KL+   G+
Sbjct: 570  VHRLKIFLQELLHREEIWWKQRSRITWLKEGDRNTRYFHLKASWRARKNLIKKLRRSDGM 629

Query: 2326 WKKGREEVSGVVNSFFTDLFSTDSPKTDSSILNLFKPVITSRENDILGKIPTDTEIWNVV 2147
                 EE+  +  SFF DL++ D       +LN+F+P IT   N +L K  TD EI + +
Sbjct: 630  MCSKEEELGEIARSFFRDLYTKDESLNPGELLNMFEPKITDEMNGMLTKPFTDEEISDAL 689

Query: 2146 KKLHPLKAPGPDGFQGVFYQSCWDIVGPLITKTVKNFFLYNMLPPDLNETFITLIPKIPS 1967
             ++ PLKAPGPDGF   F+Q  W ++   + + V+ FF        +N+T I +IPK  +
Sbjct: 690  FQIGPLKAPGPDGFPARFFQRNWGVLKRDVIEGVREFFETGEWKEGMNDTVIVMIPKTNA 749

Query: 1966 PDHISKFRPISLCNFTYKIISKLLANRLKALLHKIISPFQGAFVKGRFIGDNIGLASEIF 1787
            P  +  FRP+SLCN  YK+++K L NRL+ LL +IIS  Q AFV GR I DN  +A E F
Sbjct: 750  PVEMKDFRPVSLCNVIYKVVAKCLVNRLRPLLQEIISETQSAFVPGRMITDNALVAFECF 809

Query: 1786 HHMSRMEKKKQGWLALKLDMKKAFDRVEWQFLYQVFEKLGFSNKWIAMIRKCLETVSYRV 1607
            H + +  ++ Q + ALKLD+ KA+DRV+W FL    +KLGF N W   I  C+ +V Y V
Sbjct: 810  HSIHKCTRESQDFCALKLDLSKAYDRVDWGFLDGALQKLGFGNIWRKWIMSCVTSVRYSV 869

Query: 1606 LLNGSPLSHILPQRGLRQGDPLSPYLFILVTEALSRLLGKAEEEKKLSGIKMRQNSPPIN 1427
             LNG+ L    P RGLR+GDPL+PYLF+ + + LS +L +  +E+++  +K+ +++P ++
Sbjct: 870  RLNGNMLEPFYPTRGLREGDPLNPYLFLFIADGLSNILQRRRDERQIQPLKVCRSAPGVS 929

Query: 1426 HLLYADDLIVFSKASLNQASNMKEILGQYCSATGQEVNWMKSSAFFSRNVHQRHQKILLR 1247
            HLL+ADD ++F KA + QA+ +KE L  Y   TGQ +N  + S  FS    Q  Q  +  
Sbjct: 930  HLLFADDSLLFFKAEVIQATRIKEALDLYERCTGQLINPKECSLLFSALCPQERQDGIKA 989

Query: 1246 KWKVRRFMEKEKYLGVPILLGKKKGQDFEYLVDRLQKKVAGWKAKVLSQASRTTLVEAVG 1067
              +V R    +K LG+P   G+ K + F+ + +R +K++  W  + LS A +  L+++V 
Sbjct: 990  VLQVERTCFDDKCLGLPTPDGRMKAEQFQPIKERFEKRLTDWSERFLSLAGKEALIKSVA 1049

Query: 1066 QTVPIYAMGVYHLPTSICDKLDQINRDFWWNGNANSNAWHTLSWEKLCKAKMNGGLGFRR 887
            Q +P Y MGV+ +P   C++ +Q+ R+FWW         H ++WEKL   K+ GGLGFR 
Sbjct: 1050 QALPTYTMGVFKMPERFCEEYEQLVRNFWWGHEKGEKKVHWIAWEKLTSPKLLGGLGFRD 1109

Query: 886  ARDMNMAMLAKHSWRMINDPDSIWAKTFRSLYQWEMISQDTSRKKKPTSYFWKGVVKSMD 707
             R  N A+LA+ +WR+I  PDS+ A+  ++ Y       DT+     +S  WKG+V  ++
Sbjct: 1110 IRCFNQALLARQAWRLIESPDSLCARVLKAKYYPNGTITDTA-FPSVSSPTWKGIVHGLE 1168

Query: 706  SVKEGYMWKLGDGNSIHTFTEPWLLLNNKPIRLSDHVIDNFSFSAVDDSTHVSHLLENDS 527
             +K+G +W++GDG+    +   W + + + +++ +    N          +V  L+  D+
Sbjct: 1169 LLKKGLIWRIGDGSKTKIWRNHW-VAHGENLKILEKKTWN-------RLIYVRELIVTDT 1220

Query: 526  TYWNQDRLGELF-PKPIVECINLKEVNPTSQDKLIWWRDSKGILTVKSAYKM---LIRET 359
              WN+  +  +   +   E + ++      +D   W  +  GI +V+S Y++   L R+T
Sbjct: 1221 KTWNEPLIRHIIREEDADEILKIRIPQREEEDFPAWHYEKTGIFSVRSVYRLAWNLARKT 1280

Query: 358  EKGECSKSNCRTIRRI----WKLDIDAGTQLFLWKLYMGGLTTGDVLLRRKFKGDASCSF 191
             +   S S     R+I    WK ++    ++F WKL    L T +   +RK +   +C  
Sbjct: 1281 SEQASSSSGGADGRKIWDNVWKANVQPKVRVFAWKLAQDRLATWENKKKRKIEMFGTCPI 1340

Query: 190  CQKEIETDYHLFIGCEWARAL 128
            C ++ ET +H  + C  A+AL
Sbjct: 1341 CGQKEETGFHATVECTLAKAL 1361


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  523 bits (1346), Expect = e-145
 Identities = 291/823 (35%), Positives = 448/823 (54%), Gaps = 5/823 (0%)
 Frame = -2

Query: 2497 LKSKLVELLEREASMWRQKSSQNWVKDYARNTKFFHISTVYRRRKNKIDKLKNEQGIWKK 2318
            L+ +L EL  +  + W  +S    VKD  RNT +FH     R+++N I  + +  G W+ 
Sbjct: 326  LERELDELHAKNEAYWYLRSRVAEVKDGDRNTSYFHHKASQRKKRNLIHGIFDGGGRWQT 385

Query: 2317 GREEVSGVVNSFFTDLFSTDSPKTDS--SILNLFKPVITSRENDILGKIPTDTEIWNVVK 2144
              EE+  VV  +F ++F++  P ++    +L   K  +T   NDIL K  +  EI+  + 
Sbjct: 386  EGEEIECVVERYFQEIFTSSEPSSNDFQEVLQHVKRSVTQEYNDILLKPYSKEEIFAALS 445

Query: 2143 KLHPLKAPGPDGFQGVFYQSCWDIVGPLITKTVKNFFLYNMLPPDLNETFITLIPKIPSP 1964
             +HP KAPGPDG   +FYQ  W I+G  +   V +       P ++N T I LIPK+ SP
Sbjct: 446  DMHPCKAPGPDGMHAIFYQRFWHIIGDEVFNFVSSILHNYSCPGNVNCTNIALIPKVKSP 505

Query: 1963 DHISKFRPISLCNFTYKIISKLLANRLKALLHKIISPFQGAFVKGRFIGDNIGLASEIFH 1784
              +S+FRPISLCN  YKI SK +  RLK  L  I +  Q AFV GR I DN  +A EIFH
Sbjct: 506  TVVSEFRPISLCNVLYKIASKAIVLRLKRFLPCIATENQSAFVPGRLISDNSLIALEIFH 565

Query: 1783 HMSRMEKKKQGWLALKLDMKKAFDRVEWQFLYQVFEKLGFSNKWIAMIRKCLETVSYRVL 1604
             M +    ++G +A+KLDM KA+DRVEW FL ++   +GF  +W+ ++  C+ TVSY  +
Sbjct: 566  TMKKRNNSRKGLMAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRWVNLVMSCVATVSYSFI 625

Query: 1603 LNGSPLSHILPQRGLRQGDPLSPYLFILVTEALSRLLGKAEEEKKLSGIKMRQNSPPINH 1424
            +NG     + P RGLRQGDPLSP+LFILV +A S+++ +    K++ G K  +N P I+H
Sbjct: 626  INGRVCGSVTPSRGLRQGDPLSPFLFILVADAFSQMVKQKVVSKEIHGAKASRNGPEISH 685

Query: 1423 LLYADDLIVFSKASLNQASNMKEILGQYCSATGQEVNWMKSSAFFSRNVHQRHQKILLRK 1244
            LL+ADD ++F++A+  +   + +IL +Y +A+GQ++N+ KS   FSR V    ++ L+  
Sbjct: 686  LLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVSFSRGVSCEKKEELITL 745

Query: 1243 WKVRRFMEKEKYLGVPILLGKKKGQDFEYLVDRLQKKVAGWKAKVLSQASRTTLVEAVGQ 1064
              +R+    +KYLG+P L G+ K   F  L+DR+ KK+ GWK K+LS+A +  L++AV Q
Sbjct: 746  LHMRQVDRHQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEKLLSRAGKEVLIKAVIQ 805

Query: 1063 TVPIYAMGVYHLPTSICDKLDQINRDFWWNGNANSNAWHTLSWEKLCKAKMNGGLGFRRA 884
             +P Y MGVY LP ++  ++      FWW G  +    H LSWEK+CK K  GG+GF+  
Sbjct: 806  ALPTYLMGVYKLPVAVIQEIHSAMARFWWGGKGDERKMHWLSWEKMCKPKCMGGMGFKDL 865

Query: 883  RDMNMAMLAKHSWRMINDPDSIWAKTFRSLYQWEMISQDTSRKKKPTSYFWKGVVKSMDS 704
               N A+L K  WR++++ +S+ ++   + Y +       +R     SY W+ +  +   
Sbjct: 866  AVFNDALLGKQVWRLLHNKESLLSRVMSAKY-YPHGDVRYARLGYSHSYSWRSIWGAKSL 924

Query: 703  VKEGYMWKLGDGNSIHTFTEPWLLLNNKPIRLSDHVIDNFSFSAVDDSTHVSHLLENDST 524
            V EG +W++GDG  I  ++ PW         + D        + V+    V  L++ +  
Sbjct: 925  VLEGLIWRVGDGTKIDIWSAPW---------VGDEEGRFIKSARVEGLEVVGDLMDVERK 975

Query: 523  YWNQDRLGELFPKPIVECINLKEVNPTS-QDKLIWWRDSKGILTVKSAYKMLIRETEKGE 347
             WN + +   F +   +CI    ++    QD+L W     G  +VK+AY +      KG 
Sbjct: 976  EWNVELIERHFNERDQQCILAIPLSTRCLQDELTWAYSKDGTYSVKTAYML-----GKGG 1030

Query: 346  CSKSNCRTIRRIWKLDIDAGTQLFLWKLYMGGLTTGDVLLRRKFKGDASCSFCQKEIETD 167
                  R    +W L++    + FLW+     L    VL RR    +A C  C +E ET 
Sbjct: 1031 NLDDFHRVWNILWSLNVSPKVRHFLWRACTSSLPVRKVLQRRHLIDEAGCPCCAREDETQ 1090

Query: 166  YHLFIGCEWARALW--MGSILGQRMMQNEKKDVRAALDSLLEW 44
            +HLF  C  +  LW  +GS +    +++E     A  D+L+ W
Sbjct: 1091 FHLFYRCPMSLKLWEELGSYILLPGIEDE-----AMCDTLVRW 1128


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score =  522 bits (1345), Expect = e-145
 Identities = 280/806 (34%), Positives = 445/806 (55%), Gaps = 11/806 (1%)
 Frame = -2

Query: 2509 KIQSLKSKLVELLEREASMWRQKSSQNWVKDYARNTKFFHISTVYRRRKNKIDKLKNEQG 2330
            ++  LK +L +    E   W++KS   W+++  RNTK+FH +T  RR +N+I KL +E+G
Sbjct: 317  ELARLKKELSQEYNNEEQFWQEKSRIMWMRNGDRNTKYFHAATKNRRAQNRIQKLIDEEG 376

Query: 2329 IWKKGREEVSGVVNSFFTDLFSTDSPKTDSSILNLFKPVITSRENDILGKIPTDTEIWNV 2150
                  E++  V  ++F  LF+++        L    P+++ + N+ L    T  E+   
Sbjct: 377  REWTSDEDLGRVAEAYFKKLFASEDVGYTVEELENLTPLVSDQMNNNLLAPITKEEVQRA 436

Query: 2149 VKKLHPLKAPGPDGFQGVFYQSCWDIVGPLITKTVKNFFLYNMLPPDLNETFITLIPKIP 1970
               ++P K PGPDG  G  YQ  W+ +G  IT+ V+ FF    +   +N+T I LIPKI 
Sbjct: 437  TFSINPHKCPGPDGMNGFLYQQFWETMGDQITEMVQAFFRSGSIEEGMNKTNICLIPKIL 496

Query: 1969 SPDHISKFRPISLCNFTYKIISKLLANRLKALLHKIISPFQGAFVKGRFIGDNIGLASEI 1790
              + ++ FRPISLCN  YK+I KL+ANRLK +L  +IS  Q AFVKGR I DNI +A E+
Sbjct: 497  KAEKMTDFRPISLCNVIYKVIGKLMANRLKKILPSLISETQAAFVKGRLISDNILIAHEL 556

Query: 1789 FHHMSRMEKKKQGWLALKLDMKKAFDRVEWQFLYQVFEKLGFSNKWIAMIRKCLETVSYR 1610
             H +S   K  + ++A+K D+ KA+DRVEW FL +    LGF++ WI +I +C+++V Y+
Sbjct: 557  LHALSSNNKCSEEFIAIKTDISKAYDRVEWPFLEKAMRGLGFADHWIRLIMECVKSVRYQ 616

Query: 1609 VLLNGSPLSHILPQRGLRQGDPLSPYLFILVTEALSRLLGKAEEEKKLSGIKMRQNSPPI 1430
            VL+NG+P   I+P RGLRQGDPLSPYLF++ TE L ++L  AE++ +++G+K+ + +PPI
Sbjct: 617  VLINGTPHGEIIPSRGLRQGDPLSPYLFVICTEMLVKMLQSAEQKNQITGLKVARGAPPI 676

Query: 1429 NHLLYADDLIVFSKASLNQASNMKEILGQYCSATGQEVNWMKSSAFFSRNVHQRHQKILL 1250
            +HLL+ADD + + K +      +  I+ +Y  A+GQ VN++KSS +F +++ +  + ++ 
Sbjct: 677  SHLLFADDSMFYCKVNDEALGQIIRIIEEYSLASGQRVNYLKSSIYFGKHISEERRCLVK 736

Query: 1249 RKWKVRRFMEKEKYLGVPILLGKKKGQDFEYLVDRLQKKVAGWKAKVLSQASRTTLVEAV 1070
            RK  + R   +  YLG+P      K     YL DRL KKV GW++  LS   +  L++AV
Sbjct: 737  RKLGIEREGGEGVYLGLPESFQGSKVATLSYLKDRLGKKVLGWQSNFLSPGGKEILLKAV 796

Query: 1069 GQTVPIYAMGVYHLPTSICDKLDQINRDFWWNGNANSNAWHTLSWEKLCKAKMNGGLGFR 890
               +P Y M  + +P +IC +++ +  +FWW         H  +W  L + K  GGLGF+
Sbjct: 797  AMALPTYTMSCFKIPKTICQQIESVMAEFWWKNKKEGRGLHWKAWCHLSRPKAVGGLGFK 856

Query: 889  RARDMNMAMLAKHSWRMINDPDSIWAKTFRSLYQWEMISQDTSRKKKPTSYFWKGVVKSM 710
                 N+A+L K  WRMI + DS+ AK F+S Y  +    +     +P S+ WK + ++ 
Sbjct: 857  EIEAFNIALLGKQLWRMITEKDSLMAKVFKSRYFSKSDPLNAPLGSRP-SFAWKSIYEAQ 915

Query: 709  DSVKEGYMWKLGDGNSIHTFTEPWLLLNNKPIRLS-----DHVIDNFSFSAVDDSTHVSH 545
              +K+G    +G+G +I+ +T+PW  +  KP + +      H++  ++ +++     V  
Sbjct: 916  VLIKQGIRAVIGNGETINVWTDPW--IGAKPAKAAQAVKRSHLVSQYAANSIH---VVKD 970

Query: 544  LLENDSTYWNQDRLGELFPKPIVE-CINLKEVNPTSQDKLIWWRDSKGILTVKSAYKMLI 368
            LL  D   WN + +  LFP    E  + L+     ++D+  W     G  +VKS Y ++ 
Sbjct: 971  LLLPDGRDWNWNLVSLLFPDNTQENILALRPGGKETRDRFTWEYSRSGHYSVKSGYWVMT 1030

Query: 367  -----RETEKGECSKSNCRTIRRIWKLDIDAGTQLFLWKLYMGGLTTGDVLLRRKFKGDA 203
                 R   +     S     ++IWKLD+      FLW+     L+    L  R    + 
Sbjct: 1031 EIINQRNNPQEVLQPSLDPIFQQIWKLDVPPKIHHFLWRCVNNCLSVASNLAYRHLAREK 1090

Query: 202  SCSFCQKEIETDYHLFIGCEWARALW 125
            SC  C    ET  HL   C +AR  W
Sbjct: 1091 SCVRCPSHGETVNHLLFKCPFARLTW 1116