BLASTX nr result
ID: Coptis24_contig00004960
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004960
(2094 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520174.1| conserved hypothetical protein [Ricinus comm... 657 0.0
ref|XP_002315697.1| predicted protein [Populus trichocarpa] gi|2... 656 0.0
ref|XP_003517757.1| PREDICTED: uncharacterized protein LOC100787... 630 e-178
ref|XP_003519785.1| PREDICTED: uncharacterized protein LOC100819... 627 e-177
ref|XP_002272954.1| PREDICTED: uncharacterized protein LOC100260... 617 e-174
>ref|XP_002520174.1| conserved hypothetical protein [Ricinus communis]
gi|223540666|gb|EEF42229.1| conserved hypothetical
protein [Ricinus communis]
Length = 512
Score = 657 bits (1696), Expect = 0.0
Identities = 343/543 (63%), Positives = 390/543 (71%), Gaps = 8/543 (1%)
Frame = +3
Query: 183 MGVCVSRPEGCVXXXXXXXXXXXXXXXXXXXXXXXXXXXQKTQITATSAA--------DI 338
MG CVS PEGCV + S+A D
Sbjct: 1 MGGCVSTPEGCVGGRLRSSKKKTRKKKKGIRRRVSSRLSDHGSLDRPSSAVPPAAAPPDH 60
Query: 339 DRSFNNPTFQGSTEEAWFDSIAVFESDCEDDYQSVPDDAASLNGLEGAXXXXXXXXXRDS 518
SF+NPTFQGS E+AWFDS+A+FESDCE+DY+SVPDD SLNG +G
Sbjct: 61 LSSFSNPTFQGSIEDAWFDSVAIFESDCEEDYESVPDDLLSLNGSDGLPHD--------- 111
Query: 519 NHGESNDNVPCIPSSERRSNVGQGNSAHNSVSEGVKISNTRVFHSSDADVQSKSDGLLNG 698
++ ++ GNSA NSVSE SK DG N
Sbjct: 112 -------------QMKKAGDLSAGNSARNSVSEAPV---------------SKFDGPSNE 143
Query: 699 AKRPVSLDEVSSDSVTEIAERESGVLENCGILPNNCLPCLASTVPSLEKRRSLSPGPPST 878
AK+PV LDE++S S E A +E G+LENCGILP NCLPCLASTV +EKRRSLS PPS
Sbjct: 144 AKQPVFLDEIAS-SADENAGKEEGLLENCGILPGNCLPCLASTVSQVEKRRSLSSSPPSA 202
Query: 879 RKKAALKLSFKWREGQTNSSLSSTRMVLQRPIAGSQVPFCPLEKKMFDCWSSIDPSTFKV 1058
RKKAALKLSFKW+EG N+SL S++ +LQRPIAGSQVPFCP++KKM DCWS I+P +FKV
Sbjct: 203 RKKAALKLSFKWKEGHANNSLFSSKPILQRPIAGSQVPFCPMDKKMLDCWSHIEPGSFKV 262
Query: 1059 RGEYYLRDKKKEPATNFSAYYPFGVDVFLSPRKIKHIAQFVDLPVITPFGKLPTILVVNV 1238
RG+ YLRDKKKE A +AYYPFGVDVFLSPRKI HIA+FV+LPVI GKLPTILVVNV
Sbjct: 263 RGQNYLRDKKKEFAPAHAAYYPFGVDVFLSPRKIDHIARFVELPVINSSGKLPTILVVNV 322
Query: 1239 QIPLYPATIFQNEFDGEGMSFVLYFRLSENYSKELAPHFLENLRRIIDDEVEKVKNFPVD 1418
QIPLY A +FQ+E DGEGM+FVLYF+LSE+YSKEL HF E++RRIIDDEVEKVK FPVD
Sbjct: 323 QIPLYTAALFQSEVDGEGMNFVLYFKLSESYSKELPAHFQESIRRIIDDEVEKVKGFPVD 382
Query: 1419 TILPVRDRLKILGRVANVDDLGLSAPERKLMHAYNEKPVLSRPQHEFYLGENYLEIDIDM 1598
TI+P R+RLKILGRV NVDDL LS+ ERKLM AYNEKPVLSRPQHEFYLGENY EIDIDM
Sbjct: 383 TIVPYRERLKILGRVVNVDDLHLSSAERKLMQAYNEKPVLSRPQHEFYLGENYFEIDIDM 442
Query: 1599 HRFGYISRKGFEVFHDKLKLCVLDVGLTIQGNKAEELPEQVLCSIRLNGIDYMNYHQLGL 1778
HRF YISRKGFE F D+LK+C+LDVGLTIQGNKAEELPEQ+LC +RLNGIDYMNYHQLGL
Sbjct: 443 HRFSYISRKGFEAFLDRLKICILDVGLTIQGNKAEELPEQILCCVRLNGIDYMNYHQLGL 502
Query: 1779 RQD 1787
QD
Sbjct: 503 NQD 505
>ref|XP_002315697.1| predicted protein [Populus trichocarpa] gi|222864737|gb|EEF01868.1|
predicted protein [Populus trichocarpa]
Length = 551
Score = 656 bits (1693), Expect = 0.0
Identities = 333/548 (60%), Positives = 394/548 (71%), Gaps = 13/548 (2%)
Frame = +3
Query: 183 MGVCVSRPEGCVXXXXXXXXXXXXXXXXXXXXXXXXXXXQKTQITATSAADIDRS----- 347
MG CVS PEGCV +++ + +D S
Sbjct: 1 MGACVSTPEGCVGGRLKSSKKMKIRRKGKRGTAFKRRSVPPSRMLSDDKSDGPASAAPPP 60
Query: 348 -----FNNPTFQGSTEEAWFDSIAVFESDCEDDYQSVPDDAASLNGLEGAXXXXXXXXXR 512
F NPTFQGS EEAWFDS A+ ESDC++D++SVPDD SLN +G R
Sbjct: 61 HHLPSFTNPTFQGSKEEAWFDSAAILESDCDEDFESVPDDILSLNVFDGVSLSSTASG-R 119
Query: 513 DSNHGESNDNVPCIPSSERRSNVGQ---GNSAHNSVSEGVKISNTRVFHSSDADVQSKSD 683
+NHG+ N N+ +++ G GNS H+SVSE + +N VF+ D SKSD
Sbjct: 120 VANHGDCNVNMQHSSFTDQMQKAGDLSAGNSTHDSVSEATEQTNIHVFNLDHVDSVSKSD 179
Query: 684 GLLNGAKRPVSLDEVSSDSVTEIAERESGVLENCGILPNNCLPCLASTVPSLEKRRSLSP 863
G N K+PV LDE++S + E G+L+NCGILP NCLPCLASTVP +EKRRSLS
Sbjct: 180 GPSNEVKQPVFLDEITS---ADENAGEEGLLDNCGILPGNCLPCLASTVPPVEKRRSLSS 236
Query: 864 GPPSTRKKAALKLSFKWREGQTNSSLSSTRMVLQRPIAGSQVPFCPLEKKMFDCWSSIDP 1043
PPS RKK ALKL FKW+EG ++++L S++M+L RPIAGSQVPFCP+EKKM DCWS I+P
Sbjct: 237 SPPSARKKGALKLPFKWKEGNSSNTLFSSKMILHRPIAGSQVPFCPMEKKMLDCWSHIEP 296
Query: 1044 STFKVRGEYYLRDKKKEPATNFSAYYPFGVDVFLSPRKIKHIAQFVDLPVITPFGKLPTI 1223
+FKVRG+ Y RDKKKE A N SAYYPFGVDVFLSPRK+ HIA+FVDLP+I G PTI
Sbjct: 297 CSFKVRGQSYFRDKKKEFAPNCSAYYPFGVDVFLSPRKVDHIARFVDLPIINSAGNFPTI 356
Query: 1224 LVVNVQIPLYPATIFQNEFDGEGMSFVLYFRLSENYSKELAPHFLENLRRIIDDEVEKVK 1403
LVVNVQ+PLYPA IFQ+E DGEG +FVLYF+LS++YSKEL HF E++RR+IDDEVEKVK
Sbjct: 357 LVVNVQVPLYPAAIFQSESDGEGTNFVLYFKLSDSYSKELPTHFQESIRRLIDDEVEKVK 416
Query: 1404 NFPVDTILPVRDRLKILGRVANVDDLGLSAPERKLMHAYNEKPVLSRPQHEFYLGENYLE 1583
FPVDTI R+RLKILGRV NV+DL LSA ERKLM AYNEKPVLSRPQHEFYLG+NY E
Sbjct: 417 GFPVDTIASFRERLKILGRVVNVEDLHLSAAERKLMQAYNEKPVLSRPQHEFYLGDNYFE 476
Query: 1584 IDIDMHRFGYISRKGFEVFHDKLKLCVLDVGLTIQGNKAEELPEQVLCSIRLNGIDYMNY 1763
IDIDMHRF YISRKGF+ F D+LK+CVLD+GLTIQGNK EELPEQ+LC IRLNGIDYM Y
Sbjct: 477 IDIDMHRFSYISRKGFQAFLDRLKICVLDIGLTIQGNKVEELPEQILCCIRLNGIDYMKY 536
Query: 1764 HQLGLRQD 1787
HQLGL Q+
Sbjct: 537 HQLGLNQE 544
>ref|XP_003517757.1| PREDICTED: uncharacterized protein LOC100787325 [Glycine max]
Length = 512
Score = 630 bits (1626), Expect = e-178
Identities = 324/536 (60%), Positives = 381/536 (71%), Gaps = 1/536 (0%)
Frame = +3
Query: 183 MGVCVSRPEGCVXXXXXXXXXXXXXXXXXXXXXXXXXXXQKTQITATSAADI-DRSFNNP 359
MG CVS P+GCV K + A + D SF NP
Sbjct: 1 MGACVSTPQGCVGGRLSSSKKKTRKRRREGLRRRVTSRLCKESLEKIDVAGLPDCSFANP 60
Query: 360 TFQGSTEEAWFDSIAVFESDCEDDYQSVPDDAASLNGLEGAXXXXXXXXXRDSNHGESND 539
TFQGS EEAWFDS+AVF+SDC+DDYQSVPDD SL+G+EG D+NHG S D
Sbjct: 61 TFQGSIEEAWFDSVAVFDSDCDDDYQSVPDDVVSLSGIEGGSVSSFPSSG-DANHGVSTD 119
Query: 540 NVPCIPSSERRSNVGQGNSAHNSVSEGVKISNTRVFHSSDADVQSKSDGLLNGAKRPVSL 719
+V +++ + G+ A S +DVQ ++ PV L
Sbjct: 120 HV------QKQKELLAGSEAARS-----------------SDVQYFVVDAIDSQHEPVFL 156
Query: 720 DEVSSDSVTEIAERESGVLENCGILPNNCLPCLASTVPSLEKRRSLSPGPPSTRKKAALK 899
DE+SS V + ++ G+L+NCGILPNNCLPCL ST+PS+EKRRS S PP+ RKK K
Sbjct: 157 DEISS--VDANSNKDDGLLDNCGILPNNCLPCLVSTIPSVEKRRSTSSSPPNARKKPTTK 214
Query: 900 LSFKWREGQTNSSLSSTRMVLQRPIAGSQVPFCPLEKKMFDCWSSIDPSTFKVRGEYYLR 1079
LSFKW+EG N++L S++M+LQRPIAGSQVPFCP+EKKM DCWS ID STFKVRG Y +
Sbjct: 215 LSFKWKEGHGNATLFSSKMLLQRPIAGSQVPFCPIEKKMLDCWSQIDASTFKVRGVNYFK 274
Query: 1080 DKKKEPATNFSAYYPFGVDVFLSPRKIKHIAQFVDLPVITPFGKLPTILVVNVQIPLYPA 1259
DKKK+ A N+ AYYPFGVDVFLSPRK+ HIA+FV+LPV++ K P ILVVNVQ+PLYPA
Sbjct: 275 DKKKDFAPNYPAYYPFGVDVFLSPRKVDHIARFVELPVMSSSAKFPPILVVNVQVPLYPA 334
Query: 1260 TIFQNEFDGEGMSFVLYFRLSENYSKELAPHFLENLRRIIDDEVEKVKNFPVDTILPVRD 1439
T+FQ E DGEGMS VLYF+LSE+YSKEL F E++RR++DDEVEKVK FPVDTI P R+
Sbjct: 335 TLFQGETDGEGMSIVLYFKLSESYSKELPQTFQESIRRLMDDEVEKVKGFPVDTIAPFRE 394
Query: 1440 RLKILGRVANVDDLGLSAPERKLMHAYNEKPVLSRPQHEFYLGENYLEIDIDMHRFGYIS 1619
RLKILGRV N++DL LSA ERKLM AYNEKPVLSRPQHEFY+GENY EID+DMHRF YIS
Sbjct: 395 RLKILGRVINLEDLHLSAAERKLMQAYNEKPVLSRPQHEFYMGENYFEIDLDMHRFSYIS 454
Query: 1620 RKGFEVFHDKLKLCVLDVGLTIQGNKAEELPEQVLCSIRLNGIDYMNYHQLGLRQD 1787
RKGFE F D+LK+C LDVGLTIQGNK EELPE VLC IRLNGIDYMNY QLGL QD
Sbjct: 455 RKGFEAFLDRLKVCTLDVGLTIQGNKQEELPEHVLCCIRLNGIDYMNYQQLGLTQD 510
>ref|XP_003519785.1| PREDICTED: uncharacterized protein LOC100819425 [Glycine max]
Length = 513
Score = 627 bits (1616), Expect = e-177
Identities = 325/537 (60%), Positives = 382/537 (71%), Gaps = 2/537 (0%)
Frame = +3
Query: 183 MGVCVSRPEGCVXXXXXXXXXXXXXXXXXXXXXXXXXXXQKTQITATSAADI-DRSFNNP 359
MG CVS P+GCV K A + D SF NP
Sbjct: 1 MGACVSTPQGCVGGRLSSSKKKTRKRRREGLRRRVTSRLCKESSEKVDVAGLPDCSFANP 60
Query: 360 TFQ-GSTEEAWFDSIAVFESDCEDDYQSVPDDAASLNGLEGAXXXXXXXXXRDSNHGESN 536
TFQ GS EEAWFDSIAVF+SDC+DDYQSVPDD SL+G+EG RD+ G S
Sbjct: 61 TFQAGSIEEAWFDSIAVFDSDCDDDYQSVPDDVVSLSGIEGGSVSSFPSS-RDATRGVST 119
Query: 537 DNVPCIPSSERRSNVGQGNSAHNSVSEGVKISNTRVFHSSDADVQSKSDGLLNGAKRPVS 716
D V +++ + G+ A S +DVQ +++ + PV
Sbjct: 120 DQV------QKQKELLAGSEAARS-----------------SDVQYFGVDVIDSQREPVF 156
Query: 717 LDEVSSDSVTEIAERESGVLENCGILPNNCLPCLASTVPSLEKRRSLSPGPPSTRKKAAL 896
LDE+SS V + ++ G+L+NCGILPNNCLPCLAST+PS+EKRRS S PP+ RKK
Sbjct: 157 LDEISS--VDANSNKDDGLLDNCGILPNNCLPCLASTIPSVEKRRSSSSSPPNARKKVPA 214
Query: 897 KLSFKWREGQTNSSLSSTRMVLQRPIAGSQVPFCPLEKKMFDCWSSIDPSTFKVRGEYYL 1076
KLSFKW+EG N++L S++M+LQRPIAGSQVPFCP+EKKM DCWS ID STFKVRG Y
Sbjct: 215 KLSFKWKEGHGNATLFSSKMLLQRPIAGSQVPFCPIEKKMLDCWSQIDASTFKVRGVNYF 274
Query: 1077 RDKKKEPATNFSAYYPFGVDVFLSPRKIKHIAQFVDLPVITPFGKLPTILVVNVQIPLYP 1256
+DKKK+ A N+SAYYPFGVD+FLSPRK+ HIA+FV+LPV++ K P ILVVNVQ+PLYP
Sbjct: 275 KDKKKDFAPNYSAYYPFGVDIFLSPRKVDHIARFVELPVMSSSVKFPPILVVNVQVPLYP 334
Query: 1257 ATIFQNEFDGEGMSFVLYFRLSENYSKELAPHFLENLRRIIDDEVEKVKNFPVDTILPVR 1436
AT+FQ E DGEGMS VLYF+LSE+YSKEL P F E++RR++DDEVEKVK FPVDTI P R
Sbjct: 335 ATLFQGETDGEGMSIVLYFKLSESYSKELPPPFQESIRRLMDDEVEKVKGFPVDTIAPFR 394
Query: 1437 DRLKILGRVANVDDLGLSAPERKLMHAYNEKPVLSRPQHEFYLGENYLEIDIDMHRFGYI 1616
+RLKILGRV N++DL LSA ERKLM AYNEKPVLSRPQHEFY GENY EID+DMHRF YI
Sbjct: 395 ERLKILGRVVNLEDLHLSAAERKLMQAYNEKPVLSRPQHEFYTGENYFEIDLDMHRFSYI 454
Query: 1617 SRKGFEVFHDKLKLCVLDVGLTIQGNKAEELPEQVLCSIRLNGIDYMNYHQLGLRQD 1787
SRKGFE F ++LK+C LDVGLTIQGNK EELPE VLC IRLNGIDYMNY QLGL QD
Sbjct: 455 SRKGFEAFLERLKVCTLDVGLTIQGNKQEELPENVLCCIRLNGIDYMNYQQLGLTQD 511
>ref|XP_002272954.1| PREDICTED: uncharacterized protein LOC100260447 isoform 1 [Vitis
vinifera] gi|296086464|emb|CBI32053.3| unnamed protein
product [Vitis vinifera]
Length = 510
Score = 617 bits (1592), Expect = e-174
Identities = 328/544 (60%), Positives = 380/544 (69%), Gaps = 9/544 (1%)
Frame = +3
Query: 183 MGVCVSRPEGCVXXXXXXXXXXXXXXXXXXXXXXXXXXXQKTQITATSAADI-------- 338
MG CVS PE CV +T+ AD
Sbjct: 1 MGACVSSPESCVGGKLKYPKNKFRKRRKIKRRAVSRF----ADVTSFDKADRPSRPGPPP 56
Query: 339 DRSFNNPTFQ-GSTEEAWFDSIAVFESDCEDDYQSVPDDAASLNGLEGAXXXXXXXXXRD 515
DRSF NPTF+ GS +EAWFDSI VFESDCE++++SV ++ S+NG EGA RD
Sbjct: 57 DRSFTNPTFRAGSLDEAWFDSIPVFESDCEEEFESVQEEVFSVNGFEGASVSSISSL-RD 115
Query: 516 SNHGESNDNVPCIPSSERRSNVGQGNSAHNSVSEGVKISNTRVFHSSDADVQSKSDGLLN 695
S+ + N NV H S +GV D Q K DG N
Sbjct: 116 SSLWDCNVNVQ-----------------HTSGMDGV-------------DSQLKPDGPSN 145
Query: 696 GAKRPVSLDEVSSDSVTEIAERESGVLENCGILPNNCLPCLASTVPSLEKRRSLSPGPPS 875
AK+PV LDE+S + E RE G+LENCGILPNNCLPCLAST S EKR SLS PPS
Sbjct: 146 EAKQPVFLDEISL-TADESGGREEGMLENCGILPNNCLPCLASTASSEEKRGSLSSSPPS 204
Query: 876 TRKKAALKLSFKWREGQTNSSLSSTRMVLQRPIAGSQVPFCPLEKKMFDCWSSIDPSTFK 1055
+RKK ALK+SFKWREG N+SL S+RM+LQRPIAGSQVPFCP+EKKM D WS+I+PSTFK
Sbjct: 205 SRKKGALKISFKWREGNANASLLSSRMLLQRPIAGSQVPFCPIEKKMLDSWSNIEPSTFK 264
Query: 1056 VRGEYYLRDKKKEPATNFSAYYPFGVDVFLSPRKIKHIAQFVDLPVITPFGKLPTILVVN 1235
VRGE Y RDK+K+ A N++AYYPFGVDVFL P+KI HIAQFV+LP + GK P ILVVN
Sbjct: 265 VRGENYFRDKRKDFAPNYAAYYPFGVDVFLCPQKISHIAQFVELPTVNSSGKFPPILVVN 324
Query: 1236 VQIPLYPATIFQNEFDGEGMSFVLYFRLSENYSKELAPHFLENLRRIIDDEVEKVKNFPV 1415
VQIPLYPATIFQ+E DGEGMS VLYF+LSE+YSKEL F EN+ R+IDDE+EKVK FPV
Sbjct: 325 VQIPLYPATIFQSETDGEGMSVVLYFKLSESYSKELPSCFQENIGRLIDDEMEKVKGFPV 384
Query: 1416 DTILPVRDRLKILGRVANVDDLGLSAPERKLMHAYNEKPVLSRPQHEFYLGENYLEIDID 1595
D I+P R+RLK+LGRV NV+DL LS ERKLM AYNEKP LSRPQHEFY GENY EID+D
Sbjct: 385 DAIVPFRERLKVLGRVVNVEDLHLSGAERKLMQAYNEKPFLSRPQHEFYSGENYFEIDLD 444
Query: 1596 MHRFGYISRKGFEVFHDKLKLCVLDVGLTIQGNKAEELPEQVLCSIRLNGIDYMNYHQLG 1775
MHRF YISRKGFE F D+LK+CVLD+GLTIQGNK EELPEQ+LC IRLNGI+++NYHQLG
Sbjct: 445 MHRFSYISRKGFEAFQDRLKICVLDLGLTIQGNKVEELPEQILCCIRLNGIEHINYHQLG 504
Query: 1776 LRQD 1787
L Q+
Sbjct: 505 LGQE 508