BLASTX nr result
ID: Coptis24_contig00004956
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004956 (476 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g1... 186 2e-45 emb|CBI39785.3| unnamed protein product [Vitis vinifera] 186 2e-45 emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera] 186 2e-45 ref|XP_002522801.1| ring finger protein, putative [Ricinus commu... 177 1e-42 ref|XP_002298883.1| predicted protein [Populus trichocarpa] gi|2... 176 2e-42 >ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Vitis vinifera] Length = 312 Score = 186 bits (471), Expect = 2e-45 Identities = 91/141 (64%), Positives = 103/141 (73%) Frame = +3 Query: 6 FRLPDVQQDRIYEESRCSRLANKSRTFLELFFAIWFVMGNVWVFDSRFGSLDRAPKLHVL 185 F LPD++Q R EESR S L NK RT LELFFAIWFVMGNVWVFDSRFGS RAPKLHVL Sbjct: 122 FSLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVL 181 Query: 186 CISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDRGATDDQISALPSWSYK 365 CI+LLAWNAISYS + N LGYNMNMGS+D+GA+DDQIS LPSW +K Sbjct: 182 CITLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDKGASDDQISRLPSWRFK 241 Query: 366 EVEANLELGDEAECNSDAENE 428 E ANL+L + A+ NS +E Sbjct: 242 EANANLDLPNGADSNSPLSSE 262 >emb|CBI39785.3| unnamed protein product [Vitis vinifera] Length = 343 Score = 186 bits (471), Expect = 2e-45 Identities = 91/141 (64%), Positives = 103/141 (73%) Frame = +3 Query: 6 FRLPDVQQDRIYEESRCSRLANKSRTFLELFFAIWFVMGNVWVFDSRFGSLDRAPKLHVL 185 F LPD++Q R EESR S L NK RT LELFFAIWFVMGNVWVFDSRFGS RAPKLHVL Sbjct: 153 FSLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVL 212 Query: 186 CISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDRGATDDQISALPSWSYK 365 CI+LLAWNAISYS + N LGYNMNMGS+D+GA+DDQIS LPSW +K Sbjct: 213 CITLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDKGASDDQISRLPSWRFK 272 Query: 366 EVEANLELGDEAECNSDAENE 428 E ANL+L + A+ NS +E Sbjct: 273 EANANLDLPNGADSNSPLSSE 293 >emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera] Length = 343 Score = 186 bits (471), Expect = 2e-45 Identities = 91/141 (64%), Positives = 103/141 (73%) Frame = +3 Query: 6 FRLPDVQQDRIYEESRCSRLANKSRTFLELFFAIWFVMGNVWVFDSRFGSLDRAPKLHVL 185 F LPD++Q R EESR S L NK RT LELFFAIWFVMGNVWVFDSRFGS RAPKLHVL Sbjct: 153 FSLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVL 212 Query: 186 CISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDRGATDDQISALPSWSYK 365 CI+LLAWNAISYS + N LGYNMNMGS+D+GA+DDQIS LPSW +K Sbjct: 213 CITLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDKGASDDQISRLPSWRFK 272 Query: 366 EVEANLELGDEAECNSDAENE 428 E ANL+L + A+ NS +E Sbjct: 273 EANANLDLPNGADSNSPLSSE 293 >ref|XP_002522801.1| ring finger protein, putative [Ricinus communis] gi|223538039|gb|EEF39652.1| ring finger protein, putative [Ricinus communis] Length = 323 Score = 177 bits (448), Expect = 1e-42 Identities = 86/141 (60%), Positives = 99/141 (70%) Frame = +3 Query: 6 FRLPDVQQDRIYEESRCSRLANKSRTFLELFFAIWFVMGNVWVFDSRFGSLDRAPKLHVL 185 F L D++Q R E+SRC+ L NK RT LELFFAIWFVMGNVWVFDSRFGS +RAPKLHVL Sbjct: 133 FGLSDLEQQRGSEDSRCTHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFNRAPKLHVL 192 Query: 186 CISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDRGATDDQISALPSWSYK 365 CISLLAWNA+SYS I + LGYNM MGS +RGA+DDQIS LPSW YK Sbjct: 193 CISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMQMGSAERGASDDQISRLPSWKYK 252 Query: 366 EVEANLELGDEAECNSDAENE 428 V+ N E+ +C S N+ Sbjct: 253 AVDTNSEVASNIDCTSTLAND 273 >ref|XP_002298883.1| predicted protein [Populus trichocarpa] gi|222846141|gb|EEE83688.1| predicted protein [Populus trichocarpa] Length = 341 Score = 176 bits (446), Expect = 2e-42 Identities = 90/144 (62%), Positives = 101/144 (70%), Gaps = 3/144 (2%) Frame = +3 Query: 6 FRLPDVQQDRIYEES---RCSRLANKSRTFLELFFAIWFVMGNVWVFDSRFGSLDRAPKL 176 F LPD++Q R EES RCS L +K RT LELFFAIWFVMGNVWVFDSRFGS RAPKL Sbjct: 148 FGLPDLEQQRGSEESSVCRCSILMHKCRTSLELFFAIWFVMGNVWVFDSRFGSYHRAPKL 207 Query: 177 HVLCISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDRGATDDQISALPSW 356 HVLCISLLAWNA+SYS I LGYNMNMGS +RGA+DDQIS+LPSW Sbjct: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISTVLGYNMNMGSAERGASDDQISSLPSW 267 Query: 357 SYKEVEANLELGDEAECNSDAENE 428 YK + N E + A+CNS +E Sbjct: 268 RYKAADTNSEFRNNADCNSTIASE 291