BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004956
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g1...   186   2e-45
emb|CBI39785.3| unnamed protein product [Vitis vinifera]              186   2e-45
emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]   186   2e-45
ref|XP_002522801.1| ring finger protein, putative [Ricinus commu...   177   1e-42
ref|XP_002298883.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42

>ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Vitis vinifera]
          Length = 312

 Score =  186 bits (471), Expect = 2e-45
 Identities = 91/141 (64%), Positives = 103/141 (73%)
 Frame = +3

Query: 6   FRLPDVQQDRIYEESRCSRLANKSRTFLELFFAIWFVMGNVWVFDSRFGSLDRAPKLHVL 185
           F LPD++Q R  EESR S L NK RT LELFFAIWFVMGNVWVFDSRFGS  RAPKLHVL
Sbjct: 122 FSLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVL 181

Query: 186 CISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDRGATDDQISALPSWSYK 365
           CI+LLAWNAISYS               + N LGYNMNMGS+D+GA+DDQIS LPSW +K
Sbjct: 182 CITLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDKGASDDQISRLPSWRFK 241

Query: 366 EVEANLELGDEAECNSDAENE 428
           E  ANL+L + A+ NS   +E
Sbjct: 242 EANANLDLPNGADSNSPLSSE 262


>emb|CBI39785.3| unnamed protein product [Vitis vinifera]
          Length = 343

 Score =  186 bits (471), Expect = 2e-45
 Identities = 91/141 (64%), Positives = 103/141 (73%)
 Frame = +3

Query: 6   FRLPDVQQDRIYEESRCSRLANKSRTFLELFFAIWFVMGNVWVFDSRFGSLDRAPKLHVL 185
           F LPD++Q R  EESR S L NK RT LELFFAIWFVMGNVWVFDSRFGS  RAPKLHVL
Sbjct: 153 FSLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVL 212

Query: 186 CISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDRGATDDQISALPSWSYK 365
           CI+LLAWNAISYS               + N LGYNMNMGS+D+GA+DDQIS LPSW +K
Sbjct: 213 CITLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDKGASDDQISRLPSWRFK 272

Query: 366 EVEANLELGDEAECNSDAENE 428
           E  ANL+L + A+ NS   +E
Sbjct: 273 EANANLDLPNGADSNSPLSSE 293


>emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]
          Length = 343

 Score =  186 bits (471), Expect = 2e-45
 Identities = 91/141 (64%), Positives = 103/141 (73%)
 Frame = +3

Query: 6   FRLPDVQQDRIYEESRCSRLANKSRTFLELFFAIWFVMGNVWVFDSRFGSLDRAPKLHVL 185
           F LPD++Q R  EESR S L NK RT LELFFAIWFVMGNVWVFDSRFGS  RAPKLHVL
Sbjct: 153 FSLPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVL 212

Query: 186 CISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDRGATDDQISALPSWSYK 365
           CI+LLAWNAISYS               + N LGYNMNMGS+D+GA+DDQIS LPSW +K
Sbjct: 213 CITLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDKGASDDQISRLPSWRFK 272

Query: 366 EVEANLELGDEAECNSDAENE 428
           E  ANL+L + A+ NS   +E
Sbjct: 273 EANANLDLPNGADSNSPLSSE 293


>ref|XP_002522801.1| ring finger protein, putative [Ricinus communis]
           gi|223538039|gb|EEF39652.1| ring finger protein,
           putative [Ricinus communis]
          Length = 323

 Score =  177 bits (448), Expect = 1e-42
 Identities = 86/141 (60%), Positives = 99/141 (70%)
 Frame = +3

Query: 6   FRLPDVQQDRIYEESRCSRLANKSRTFLELFFAIWFVMGNVWVFDSRFGSLDRAPKLHVL 185
           F L D++Q R  E+SRC+ L NK RT LELFFAIWFVMGNVWVFDSRFGS +RAPKLHVL
Sbjct: 133 FGLSDLEQQRGSEDSRCTHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFNRAPKLHVL 192

Query: 186 CISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDRGATDDQISALPSWSYK 365
           CISLLAWNA+SYS               I + LGYNM MGS +RGA+DDQIS LPSW YK
Sbjct: 193 CISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMQMGSAERGASDDQISRLPSWKYK 252

Query: 366 EVEANLELGDEAECNSDAENE 428
            V+ N E+    +C S   N+
Sbjct: 253 AVDTNSEVASNIDCTSTLAND 273


>ref|XP_002298883.1| predicted protein [Populus trichocarpa] gi|222846141|gb|EEE83688.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  176 bits (446), Expect = 2e-42
 Identities = 90/144 (62%), Positives = 101/144 (70%), Gaps = 3/144 (2%)
 Frame = +3

Query: 6   FRLPDVQQDRIYEES---RCSRLANKSRTFLELFFAIWFVMGNVWVFDSRFGSLDRAPKL 176
           F LPD++Q R  EES   RCS L +K RT LELFFAIWFVMGNVWVFDSRFGS  RAPKL
Sbjct: 148 FGLPDLEQQRGSEESSVCRCSILMHKCRTSLELFFAIWFVMGNVWVFDSRFGSYHRAPKL 207

Query: 177 HVLCISLLAWNAISYSXXXXXXXXXXXXXXXIGNFLGYNMNMGSIDRGATDDQISALPSW 356
           HVLCISLLAWNA+SYS               I   LGYNMNMGS +RGA+DDQIS+LPSW
Sbjct: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISTVLGYNMNMGSAERGASDDQISSLPSW 267

Query: 357 SYKEVEANLELGDEAECNSDAENE 428
            YK  + N E  + A+CNS   +E
Sbjct: 268 RYKAADTNSEFRNNADCNSTIASE 291