BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004951
         (1464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265556.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   540   e-151
ref|XP_002316157.1| predicted protein [Populus trichocarpa] gi|2...   538   e-150
ref|XP_003532904.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   524   e-146
ref|NP_001060941.1| Os08g0135400 [Oryza sativa Japonica Group] g...   518   e-144
gb|EEC82864.1| hypothetical protein OsI_27723 [Oryza sativa Indi...   518   e-144

>ref|XP_002265556.2| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Vitis vinifera]
          Length = 450

 Score =  540 bits (1390), Expect = e-151
 Identities = 266/369 (72%), Positives = 299/369 (81%), Gaps = 21/369 (5%)
 Frame = +2

Query: 419  PKKYARIPDNYTTLDQVTLALKDSGLESSNLILGIDFTKSNEWTGKQSFNNRSLHAVGDT 598
            P KY+ IPDN++T++QVT AL++SGLESSNLI+GIDFTKSNEWTGK SFNNRSLHA+GDT
Sbjct: 75   PNKYSFIPDNFSTIEQVTNALRESGLESSNLIIGIDFTKSNEWTGKASFNNRSLHAIGDT 134

Query: 599  PNPYEKAITIIGKTLAPFDEDNLIPCFGFGDVTTHDQEVFSFHSDHTPCHGFEEVLACYK 778
            PNPYEKAI+IIGKTLAPFDEDNLIPCFGFGD TTHD EVFSFH D +PCHGFEEVLACYK
Sbjct: 135  PNPYEKAISIIGKTLAPFDEDNLIPCFGFGDATTHDSEVFSFHDDRSPCHGFEEVLACYK 194

Query: 779  RIVPNLRLSGPTSFGPIVEAAVDIVEKSHGQYHVLVIIADGQVTRSIDTNDGELSPQEQK 958
            RIVPNL+LSGPTS+ P+VEAA+DIVEKS GQYHVLVIIADGQVTRS++ ND ELSPQE+K
Sbjct: 195  RIVPNLQLSGPTSYAPVVEAAIDIVEKSGGQYHVLVIIADGQVTRSVNANDKELSPQEEK 254

Query: 959  TINSIVTASSYPLSIVLVGVGDGPWEDMHSFDDKIPLRVFDNFQFVNFTAITTKNASQSE 1138
            TINSIVTASSYPLSI+LVGVGDGPW+DM  FDDKIP R FDNFQFVNFTAI +KNAS SE
Sbjct: 255  TINSIVTASSYPLSIILVGVGDGPWDDMKKFDDKIPARGFDNFQFVNFTAIMSKNASPSE 314

Query: 1139 KEAAFALAALMEIPIQYKASMELGLLGHVTGKAKKXXXXXXXXXXAMRS----------- 1285
            KE AFALAALMEIPIQYKA++E G+LG VTGKAKK          A  +           
Sbjct: 315  KETAFALAALMEIPIQYKATVEFGILGRVTGKAKKVVPRPPPASYARHAPPPYAMPYGMP 374

Query: 1286 --QRSELSSNVQ--------ESTVQDNNQACPICLTNTRDLAFQCGHMTCRECGRNLSTC 1435
              Q S LSS +          +T  + NQACPICLT+ +D+AF CGHMTCREC   +S C
Sbjct: 375  SHQPSNLSSRMPSRMPSRQLSNTRDEGNQACPICLTSVKDMAFGCGHMTCRECASKVSNC 434

Query: 1436 PICRATIRS 1462
            PICR  IR+
Sbjct: 435  PICREPIRN 443


>ref|XP_002316157.1| predicted protein [Populus trichocarpa] gi|222865197|gb|EEF02328.1|
            predicted protein [Populus trichocarpa]
          Length = 396

 Score =  538 bits (1387), Expect = e-150
 Identities = 252/353 (71%), Positives = 299/353 (84%)
 Frame = +2

Query: 404  EKKPTPKKYARIPDNYTTLDQVTLALKDSGLESSNLILGIDFTKSNEWTGKQSFNNRSLH 583
            +K+   +KY+ IPDN+++L+QVT AL+++GLESSNL++GIDFTKSNEWTGK SFNNRSLH
Sbjct: 38   KKQSIKQKYSFIPDNFSSLEQVTTALREAGLESSNLVVGIDFTKSNEWTGKVSFNNRSLH 97

Query: 584  AVGDTPNPYEKAITIIGKTLAPFDEDNLIPCFGFGDVTTHDQEVFSFHSDHTPCHGFEEV 763
            A+GDTPNPYEKAI+IIGKT+APFDEDNLIPCFGFGD TTHDQEVFSFHSDH+PCHGFEEV
Sbjct: 98   AIGDTPNPYEKAISIIGKTMAPFDEDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEV 157

Query: 764  LACYKRIVPNLRLSGPTSFGPIVEAAVDIVEKSHGQYHVLVIIADGQVTRSIDTNDGELS 943
            LACYK+IVPNLRLSGPTS+GP++EAA+DIVEKS GQYHVL+IIADGQVTRS+DT DGE+S
Sbjct: 158  LACYKKIVPNLRLSGPTSYGPVIEAAIDIVEKSGGQYHVLLIIADGQVTRSVDTGDGEMS 217

Query: 944  PQEQKTINSIVTASSYPLSIVLVGVGDGPWEDMHSFDDKIPLRVFDNFQFVNFTAITTKN 1123
            PQE++TI +IV ASSYPLSI+LVGVGDGPWEDM  FDDK+P R FDNFQFVNFTAI +KN
Sbjct: 218  PQEEQTIKAIVDASSYPLSIILVGVGDGPWEDMKRFDDKLPAREFDNFQFVNFTAIMSKN 277

Query: 1124 ASQSEKEAAFALAALMEIPIQYKASMELGLLGHVTGKAKKXXXXXXXXXXAMRSQRSELS 1303
            A+ SEKE AFALAALMEIP+QYKA++E G++G   G+AKK          + R       
Sbjct: 278  ATISEKETAFALAALMEIPLQYKAAVEFGIIGRSMGQAKKIVPRPPPVPYSRRPVLDREP 337

Query: 1304 SNVQESTVQDNNQACPICLTNTRDLAFQCGHMTCRECGRNLSTCPICRATIRS 1462
            ++V    + +  QACPICLTN +DLAF CGHMTCR+CG  +S+CPICR  I S
Sbjct: 338  THVSSPVLDERTQACPICLTNRKDLAFGCGHMTCRDCGSRVSSCPICRRPITS 390


>ref|XP_003532904.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Glycine max]
          Length = 451

 Score =  524 bits (1349), Expect = e-146
 Identities = 253/348 (72%), Positives = 290/348 (83%), Gaps = 1/348 (0%)
 Frame = +2

Query: 422  KKYARIPDNYTTLDQVTLALKDSGLESSNLILGIDFTKSNEWTGKQSFNNRSLHAVGDTP 601
            KKYA I DN++TL+QVT AL+  GLESSNLILGIDFTKSNEWTG+ SFN RSLHA+G TP
Sbjct: 101  KKYALIRDNFSTLEQVTTALRKEGLESSNLILGIDFTKSNEWTGRISFNKRSLHAIGSTP 160

Query: 602  NPYEKAITIIGKTLAPFDEDNLIPCFGFGDVTTHDQEVFSFHSDHTPCHGFEEVLACYKR 781
            NPYEKAI+IIGKTLAPFD+DNLIPCFGFGD TTHDQEVFSFHSDH+P HGFEEVLACY++
Sbjct: 161  NPYEKAISIIGKTLAPFDDDNLIPCFGFGDATTHDQEVFSFHSDHSPYHGFEEVLACYQK 220

Query: 782  IVPNLRLSGPTSFGPIVEAAVDIVEKSHGQYHVLVIIADGQVTRSIDTNDGELSPQEQKT 961
            IVPNL+LSGPTS+ P++EAA+DIVEK+ GQ+HVLVI+ADGQVTRS+DT+DGELSPQE+KT
Sbjct: 221  IVPNLKLSGPTSYAPVIEAAIDIVEKNRGQFHVLVIVADGQVTRSVDTSDGELSPQEEKT 280

Query: 962  INSIVTASSYPLSIVLVGVGDGPWEDMHSFDDKIPLRVFDNFQFVNFTAITTKNASQSEK 1141
            I ++V AS+YPL+IVLVGVGDGPWEDM  FDDKIP R +DNFQFVNFT I +KN S SEK
Sbjct: 281  IKAVVDASAYPLAIVLVGVGDGPWEDMRKFDDKIPARDYDNFQFVNFTEIMSKNISPSEK 340

Query: 1142 EAAFALAALMEIPIQYKASMELGLLGHVTGKAKKXXXXXXXXXXAMRSQRSELSSNVQES 1321
            EAAFALAALMEIP QYKA+ME G+LG VTG+AK+          +    R   S N   S
Sbjct: 341  EAAFALAALMEIPFQYKATMEFGILGRVTGRAKRIVPKPPPVPYS----RPAPSINTAAS 396

Query: 1322 TVQDNNQ-ACPICLTNTRDLAFQCGHMTCRECGRNLSTCPICRATIRS 1462
            +  D NQ ACP+CLTN RDLAF CGHMTCRECG  L+ CP+CR  I S
Sbjct: 397  SGDDQNQTACPVCLTNARDLAFGCGHMTCRECGHKLTNCPMCRERITS 444


>ref|NP_001060941.1| Os08g0135400 [Oryza sativa Japonica Group]
            gi|46390797|dbj|BAD16303.1| Copine I-like protein [Oryza
            sativa Japonica Group] gi|113622910|dbj|BAF22855.1|
            Os08g0135400 [Oryza sativa Japonica Group]
            gi|215706364|dbj|BAG93220.1| unnamed protein product
            [Oryza sativa Japonica Group] gi|222639870|gb|EEE68002.1|
            hypothetical protein OsJ_25957 [Oryza sativa Japonica
            Group]
          Length = 401

 Score =  518 bits (1333), Expect = e-144
 Identities = 247/353 (69%), Positives = 292/353 (82%), Gaps = 6/353 (1%)
 Frame = +2

Query: 422  KKYARIPDNYTTLDQVTLALKDSGLESSNLILGIDFTKSNEWTGKQSFNNRSLHAVGDTP 601
            KKY+ IPDNY +LDQVT AL+D GLESSNLILGIDFTKSNEWTGK+SF+ +SLH +G TP
Sbjct: 42   KKYSYIPDNYQSLDQVTAALRDQGLESSNLILGIDFTKSNEWTGKRSFSGQSLHKIGSTP 101

Query: 602  NPYEKAITIIGKTLAPFDEDNLIPCFGFGDVTTHDQEVFSFHSDHTPCHGFEEVLACYKR 781
            NPYE+AI+IIGKTLAPFD+DNLIPCFGFGD TTHD  VFSFH D++PCHGFEEVL+CYK+
Sbjct: 102  NPYEQAISIIGKTLAPFDDDNLIPCFGFGDATTHDYNVFSFHPDNSPCHGFEEVLSCYKK 161

Query: 782  IVPNLRLSGPTSFGPIVEAAVDIVEKSHGQYHVLVIIADGQVTRSIDTNDGELSPQEQKT 961
            IVP+LRLSGPTSF PIVEAAVDIV++S GQYHVLVI+ADGQVTRS+DT+D +LSPQE++T
Sbjct: 162  IVPHLRLSGPTSFAPIVEAAVDIVDRSGGQYHVLVIVADGQVTRSVDTSDNDLSPQERRT 221

Query: 962  INSIVTASSYPLSIVLVGVGDGPWEDMHSFDDKIPLRVFDNFQFVNFTAITTKNASQSEK 1141
            ++S+V ASSYPLSIVLVGVGDGPWEDM  FDDKIP R FDNFQFVNFT+I +++ +Q +K
Sbjct: 222  VDSVVMASSYPLSIVLVGVGDGPWEDMQKFDDKIPARQFDNFQFVNFTSIMSRSTTQQQK 281

Query: 1142 EAAFALAALMEIPIQYKASMELGLLGHVTGKAKKXXXXXXXXXXA------MRSQRSELS 1303
            E+AFALAALME+PIQYKA+MELG+LG  TGKAK+          A      +R + S  +
Sbjct: 282  ESAFALAALMEVPIQYKATMELGILGRSTGKAKRIMPAPPPLPSAAGRQPSLRREDSAAA 341

Query: 1304 SNVQESTVQDNNQACPICLTNTRDLAFQCGHMTCRECGRNLSTCPICRATIRS 1462
            +          +Q CPICLTN +DLAF CGHM CRECG +L+ CPICR TIRS
Sbjct: 342  TAAAAPPSPREDQVCPICLTNAKDLAFGCGHMCCRECGESLTKCPICRQTIRS 394


>gb|EEC82864.1| hypothetical protein OsI_27723 [Oryza sativa Indica Group]
          Length = 401

 Score =  518 bits (1333), Expect = e-144
 Identities = 247/353 (69%), Positives = 292/353 (82%), Gaps = 6/353 (1%)
 Frame = +2

Query: 422  KKYARIPDNYTTLDQVTLALKDSGLESSNLILGIDFTKSNEWTGKQSFNNRSLHAVGDTP 601
            KKY+ IPDNY +LDQVT AL+D GLESSNLILGIDFTKSNEWTGK+SF+ +SLH +G TP
Sbjct: 42   KKYSYIPDNYQSLDQVTAALRDQGLESSNLILGIDFTKSNEWTGKRSFSGQSLHKIGSTP 101

Query: 602  NPYEKAITIIGKTLAPFDEDNLIPCFGFGDVTTHDQEVFSFHSDHTPCHGFEEVLACYKR 781
            NPYE+AI+IIGKTLAPFD+DNLIPCFGFGD TTHD  VFSFH D++PCHGFEEVL+CYK+
Sbjct: 102  NPYEQAISIIGKTLAPFDDDNLIPCFGFGDATTHDYNVFSFHPDNSPCHGFEEVLSCYKK 161

Query: 782  IVPNLRLSGPTSFGPIVEAAVDIVEKSHGQYHVLVIIADGQVTRSIDTNDGELSPQEQKT 961
            IVP+LRLSGPTSF PIVEAAVDIV++S GQYHVLVI+ADGQVTRS+DT+D +LSPQE++T
Sbjct: 162  IVPHLRLSGPTSFAPIVEAAVDIVDRSGGQYHVLVIVADGQVTRSVDTSDNDLSPQERRT 221

Query: 962  INSIVTASSYPLSIVLVGVGDGPWEDMHSFDDKIPLRVFDNFQFVNFTAITTKNASQSEK 1141
            ++S+V ASSYPLSIVLVGVGDGPWEDM  FDDKIP R FDNFQFVNFT+I +++ +Q +K
Sbjct: 222  VDSVVMASSYPLSIVLVGVGDGPWEDMQKFDDKIPARQFDNFQFVNFTSIMSRSTTQQQK 281

Query: 1142 EAAFALAALMEIPIQYKASMELGLLGHVTGKAKKXXXXXXXXXXA------MRSQRSELS 1303
            E+AFALAALME+PIQYKA+MELG+LG  TGKAK+          A      +R + S  +
Sbjct: 282  ESAFALAALMEVPIQYKATMELGILGRSTGKAKRIMPAPPPLPSAAGRQPSLRREGSAAA 341

Query: 1304 SNVQESTVQDNNQACPICLTNTRDLAFQCGHMTCRECGRNLSTCPICRATIRS 1462
            +          +Q CPICLTN +DLAF CGHM CRECG +L+ CPICR TIRS
Sbjct: 342  TAAAAPPSPREDQVCPICLTNAKDLAFGCGHMCCRECGESLTKCPICRQTIRS 394