BLASTX nr result

ID: Coptis24_contig00004946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004946
         (1109 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544773.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   352   9e-95
ref|XP_002333242.1| predicted protein [Populus trichocarpa] gi|2...   352   1e-94
gb|ADU15553.1| GLU [Gossypium hirsutum]                               348   2e-93
ref|XP_003519593.1| PREDICTED: glucan endo-1,3-beta-glucosidase ...   347   4e-93
ref|XP_002302861.1| predicted protein [Populus trichocarpa] gi|2...   345   9e-93

>ref|XP_003544773.1| PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Glycine max]
          Length = 461

 Score =  352 bits (903), Expect = 9e-95
 Identities = 173/248 (69%), Positives = 204/248 (82%)
 Frame = +1

Query: 361  DAGFIGINYGRIANDLPSPTSVVQLLKTQGINKVKLYDTEPTVLKALSGSNISVVVALPN 540
            +AG IGINYGRIANDLP+P  VV+LLK+QG+N+VKLYDT+ TVL A + S + VVVA+PN
Sbjct: 21   EAGSIGINYGRIANDLPTPAKVVELLKSQGLNRVKLYDTDATVLTAFANSGMKVVVAMPN 80

Query: 541  ELLSNASQSQSFANDWVKNNILAYYPSTQIETIAVGNEVFVDPNNTTMFLVPAMKNIHSA 720
            ELL+NA+  QSF + WV+ NI +YYP+TQIE IAVGNEVFVDPNNTT FLVPAMKN+H++
Sbjct: 81   ELLANAAAEQSFTDAWVQANISSYYPATQIEAIAVGNEVFVDPNNTTKFLVPAMKNVHAS 140

Query: 721  LVNSSLDSNIKISSPIALXXXXXXXXXXXXXFKPELIQPVITPMLDFLRSSGSYLMVNAY 900
            LV  SLD NIKISSPIAL             FK EL++PVI PMLDFLR +GSYLMVNAY
Sbjct: 141  LVKYSLDKNIKISSPIALSALQNSFPASSGSFKTELLEPVIKPMLDFLRQTGSYLMVNAY 200

Query: 901  PYFAYEGNADVISLDYALFRENSGQVDSGNGLKYVSLMDAQLDAVYAAMSALKYDDLKMV 1080
            P+FAY  N+D ISLDYALF+EN G VDSGNGLKY +L DAQ+DAV+AAMSA+KYDD+K+ 
Sbjct: 201  PFFAYAANSDKISLDYALFKENPGVVDSGNGLKYTNLFDAQIDAVFAAMSAVKYDDVKIA 260

Query: 1081 VSETGWPS 1104
            VSETGWPS
Sbjct: 261  VSETGWPS 268


>ref|XP_002333242.1| predicted protein [Populus trichocarpa]
            gi|224129034|ref|XP_002320484.1| predicted protein
            [Populus trichocarpa] gi|118480997|gb|ABK92452.1| unknown
            [Populus trichocarpa] gi|222835778|gb|EEE74213.1|
            predicted protein [Populus trichocarpa]
            gi|222861257|gb|EEE98799.1| predicted protein [Populus
            trichocarpa]
          Length = 470

 Score =  352 bits (902), Expect = 1e-94
 Identities = 172/249 (69%), Positives = 206/249 (82%)
 Frame = +1

Query: 361  DAGFIGINYGRIANDLPSPTSVVQLLKTQGINKVKLYDTEPTVLKALSGSNISVVVALPN 540
            DAG +G+NYGRIAN+LPS   VV L+K+QG+ +VK+YDT+P VLKALSGS I V V LPN
Sbjct: 20   DAGSVGVNYGRIANNLPSAVKVVNLVKSQGLERVKVYDTDPAVLKALSGSGIKVTVDLPN 79

Query: 541  ELLSNASQSQSFANDWVKNNILAYYPSTQIETIAVGNEVFVDPNNTTMFLVPAMKNIHSA 720
            +LL +A++  +FA  WV+ NI+AY+PSTQIE+IAVGNEVFVDP+NTT FL+PAMKNIH A
Sbjct: 80   QLLYSAAKYPNFARSWVQKNIVAYHPSTQIESIAVGNEVFVDPHNTTKFLIPAMKNIHQA 139

Query: 721  LVNSSLDSNIKISSPIALXXXXXXXXXXXXXFKPELIQPVITPMLDFLRSSGSYLMVNAY 900
            LV  +L S+IK+SSPIAL             F+PELI+PV  PMLDFLR +GSYLMVNAY
Sbjct: 140  LVKFNLHSSIKVSSPIALSALQSSYPSSAGSFRPELIEPVFKPMLDFLRQTGSYLMVNAY 199

Query: 901  PYFAYEGNADVISLDYALFRENSGQVDSGNGLKYVSLMDAQLDAVYAAMSALKYDDLKMV 1080
            P+FAYE N+DVISLDYALFREN G VDSGNGLKY +L DAQ+DAV+AA+SALKYDD+KMV
Sbjct: 200  PFFAYESNSDVISLDYALFRENPGVVDSGNGLKYFNLFDAQIDAVFAALSALKYDDVKMV 259

Query: 1081 VSETGWPSK 1107
            V+ETGWPSK
Sbjct: 260  VTETGWPSK 268


>gb|ADU15553.1| GLU [Gossypium hirsutum]
          Length = 469

 Score =  348 bits (892), Expect = 2e-93
 Identities = 172/247 (69%), Positives = 205/247 (82%)
 Frame = +1

Query: 364  AGFIGINYGRIANDLPSPTSVVQLLKTQGINKVKLYDTEPTVLKALSGSNISVVVALPNE 543
            +G +GINYGR+AN+LPSP  VV+LLK+QGINKVKLYDT+ TVL AL+ S I+VVVALPNE
Sbjct: 24   SGSVGINYGRVANNLPSPEKVVELLKSQGINKVKLYDTDATVLTALADSGITVVVALPNE 83

Query: 544  LLSNASQSQSFANDWVKNNILAYYPSTQIETIAVGNEVFVDPNNTTMFLVPAMKNIHSAL 723
            LLS+ +  QSFA++WV+ NI  +YP T+IE IAVGNEVFVDP NTT +LVPAMKNIH++L
Sbjct: 84   LLSSTAADQSFADNWVEANITKFYPKTKIEAIAVGNEVFVDPANTTKYLVPAMKNIHASL 143

Query: 724  VNSSLDSNIKISSPIALXXXXXXXXXXXXXFKPELIQPVITPMLDFLRSSGSYLMVNAYP 903
            V S LDS IKISSPIA              FKPELI+PVI PMLDFL+ +GSYLMVNAYP
Sbjct: 144  VKSKLDSAIKISSPIAFSALKTSYPSSAGSFKPELIEPVIKPMLDFLKQTGSYLMVNAYP 203

Query: 904  YFAYEGNADVISLDYALFRENSGQVDSGNGLKYVSLMDAQLDAVYAAMSALKYDDLKMVV 1083
            +FAY  N+D ISLDYALF++N G VDSGNGLKY SL++AQ+DAV+AAMSA+KYDD+KMVV
Sbjct: 204  FFAYSANSDQISLDYALFKDNPGVVDSGNGLKYSSLLEAQIDAVFAAMSAIKYDDVKMVV 263

Query: 1084 SETGWPS 1104
            +ETGWPS
Sbjct: 264  TETGWPS 270


>ref|XP_003519593.1| PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Glycine max]
          Length = 471

 Score =  347 bits (889), Expect = 4e-93
 Identities = 169/248 (68%), Positives = 200/248 (80%)
 Frame = +1

Query: 361  DAGFIGINYGRIANDLPSPTSVVQLLKTQGINKVKLYDTEPTVLKALSGSNISVVVALPN 540
            +AG +GINYGR+ANDLP+P  VV+LLK QG+N+VKLYDT+ TVL A + S I VVVA+PN
Sbjct: 27   EAGSVGINYGRVANDLPTPAKVVELLKAQGLNRVKLYDTDATVLTAFANSGIKVVVAMPN 86

Query: 541  ELLSNASQSQSFANDWVKNNILAYYPSTQIETIAVGNEVFVDPNNTTMFLVPAMKNIHSA 720
            ELL+NA+  QSF + WV+ NI  YYP+TQIE IAVGNEVFVDPNNTT FLVPAMKN+H++
Sbjct: 87   ELLANAAADQSFTDAWVQANISTYYPATQIEAIAVGNEVFVDPNNTTKFLVPAMKNVHAS 146

Query: 721  LVNSSLDSNIKISSPIALXXXXXXXXXXXXXFKPELIQPVITPMLDFLRSSGSYLMVNAY 900
            L   +LD NIKISSPIAL             FK EL++PVI PMLD LR +GSYLMVNAY
Sbjct: 147  LTKYNLDKNIKISSPIALSALQNSFPASSGSFKTELVEPVIKPMLDLLRQTGSYLMVNAY 206

Query: 901  PYFAYEGNADVISLDYALFRENSGQVDSGNGLKYVSLMDAQLDAVYAAMSALKYDDLKMV 1080
            P+FAY  N+D ISLDYALF+EN G VDSGNGLKY +L DAQ+DAV+AAMSALKY+D+K+ 
Sbjct: 207  PFFAYAANSDKISLDYALFKENPGVVDSGNGLKYTNLFDAQIDAVFAAMSALKYEDVKIA 266

Query: 1081 VSETGWPS 1104
            VSETGWPS
Sbjct: 267  VSETGWPS 274


>ref|XP_002302861.1| predicted protein [Populus trichocarpa] gi|222844587|gb|EEE82134.1|
            predicted protein [Populus trichocarpa]
          Length = 470

 Score =  345 bits (886), Expect = 9e-93
 Identities = 168/249 (67%), Positives = 204/249 (81%)
 Frame = +1

Query: 361  DAGFIGINYGRIANDLPSPTSVVQLLKTQGINKVKLYDTEPTVLKALSGSNISVVVALPN 540
            DAG IG+NYGRIAN+LP+   VVQL+K+QG+ ++K+YDT+P VLKALSG  I V V LPN
Sbjct: 20   DAGSIGVNYGRIANNLPAAAKVVQLVKSQGLERIKVYDTDPIVLKALSGCGIKVTVDLPN 79

Query: 541  ELLSNASQSQSFANDWVKNNILAYYPSTQIETIAVGNEVFVDPNNTTMFLVPAMKNIHSA 720
            ELL +A+++  FA  WV+ N++AY+PSTQIE IAVGNEVFVDP+NTT FL+PAM+NIH A
Sbjct: 80   ELLYSAAKNPYFARTWVQKNVVAYHPSTQIEAIAVGNEVFVDPHNTTKFLIPAMRNIHQA 139

Query: 721  LVNSSLDSNIKISSPIALXXXXXXXXXXXXXFKPELIQPVITPMLDFLRSSGSYLMVNAY 900
            LV  +L S+IKISSP+AL             F+PELI+PV  PMLDFLR +GSYLMVNAY
Sbjct: 140  LVKFNLHSSIKISSPVALSALQSSYPSSAGSFRPELIEPVFKPMLDFLRQTGSYLMVNAY 199

Query: 901  PYFAYEGNADVISLDYALFRENSGQVDSGNGLKYVSLMDAQLDAVYAAMSALKYDDLKMV 1080
            P+FAYE N+DVISLDYAL REN G VDSGNGL+Y SL DAQ+DAV+AA+SALKYDD+K+V
Sbjct: 200  PFFAYESNSDVISLDYALLRENPGVVDSGNGLRYFSLFDAQIDAVFAALSALKYDDIKIV 259

Query: 1081 VSETGWPSK 1107
            V+ETGWPSK
Sbjct: 260  VTETGWPSK 268


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