BLASTX nr result

ID: Coptis24_contig00004937 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004937
         (1688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285366.1| PREDICTED: threonine synthase, chloroplastic...   833   0.0  
sp|Q9MT28.1|THRC_SOLTU RecName: Full=Threonine synthase, chlorop...   821   0.0  
ref|XP_002514088.1| threonine synthase, putative [Ricinus commun...   816   0.0  
ref|XP_004144015.1| PREDICTED: threonine synthase, chloroplastic...   814   0.0  
gb|AGA60119.1| threonine synthase [Lens culinaris]                    804   0.0  

>ref|XP_002285366.1| PREDICTED: threonine synthase, chloroplastic [Vitis vinifera]
          Length = 522

 Score =  833 bits (2151), Expect = 0.0
 Identities = 413/489 (84%), Positives = 446/489 (91%), Gaps = 2/489 (0%)
 Frame = -3

Query: 1473 FLIKACSTNSPDPSL-IKHRRPADQNIREEARHNHLSSNTHGFSAKYVPFNADPTSDESY 1297
            F I+ACS+     S+   HRRPAD+NIR+EAR    S N HGFSA YVPFNADP+S ESY
Sbjct: 34   FPIRACSSTEAAGSIKTHHRRPADENIRDEARRQS-SGNHHGFSAVYVPFNADPSSTESY 92

Query: 1296 SLDEIVYRSRSGGLLDVQHDMEALKKFDGQYWKTLFDSRIGKTTWPYGSGVWSKKEWVLP 1117
            SLDEIVYRSRSGGLLDV HD++ALKK+DGQYW++LFDSR+GKTTWPYGSGVWSKKEWVLP
Sbjct: 93   SLDEIVYRSRSGGLLDVSHDLDALKKYDGQYWRSLFDSRVGKTTWPYGSGVWSKKEWVLP 152

Query: 1116 EIDSDHIVSAFEGNSNLFWAERYGKETLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNR 937
            EIDSD IVSAFEGNSNLFWAER+GK+ LGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNR
Sbjct: 153  EIDSDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNR 212

Query: 936  LRKLNRPIVGVGCASTGDTSXXXXXXXXXAGIPAIVFLPTDRISMAQLVQPIANGAFVLS 757
            LRK+NRP+VGVGCASTGDTS         AGIP+IVFLP +RIS+AQLVQPIANGAFVLS
Sbjct: 213  LRKMNRPVVGVGCASTGDTSAALSAYCAAAGIPSIVFLPANRISIAQLVQPIANGAFVLS 272

Query: 756  LDTDFDGCMQLIREITAELPIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGN 577
            LDTDFDGCMQLIRE+TAELPIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGN
Sbjct: 273  LDTDFDGCMQLIREVTAELPIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGN 332

Query: 576  LGNIYAFYKGFHMCKELGLVDRMPRLVCAQAANANPLYLHYKSGYSDFKSVKANATFASA 397
            LGNIYAFYKGFHMCKELGLVDR+PRLVCAQAANANPLYLHYKSG+ +FK VKAN TFASA
Sbjct: 333  LGNIYAFYKGFHMCKELGLVDRIPRLVCAQAANANPLYLHYKSGWGEFKPVKANTTFASA 392

Query: 396  IQIGDPVSIDRAVYALQNSNGIVEEATEEELMDAMAQADLSGMFICPHTGVALSALIKLR 217
            IQIGDPVSIDRAVYAL+NS+GIVEEATEEELMDA A+AD +GMFICPHTGVAL+AL KLR
Sbjct: 393  IQIGDPVSIDRAVYALKNSDGIVEEATEEELMDATAKADSTGMFICPHTGVALTALFKLR 452

Query: 216  KSGVIGCNDRTVVVSTAHGLKFTQSKVDYHSKSIPDMSCRFANPPVQVKADFGSVMDVLK 37
            +SGVI   DRTVVVSTAHGLKFTQSK+DYHSK IPD++CRFANPPVQVKADFGSVMDVLK
Sbjct: 453  ESGVIRPTDRTVVVSTAHGLKFTQSKIDYHSKDIPDIACRFANPPVQVKADFGSVMDVLK 512

Query: 36   TY-LSRDQK 13
             Y LSRD +
Sbjct: 513  KYLLSRDPR 521


>sp|Q9MT28.1|THRC_SOLTU RecName: Full=Threonine synthase, chloroplastic; Short=TS; Flags:
            Precursor gi|8439547|gb|AAF74984.1|AF082894_1 threonine
            synthase [Solanum tuberosum]
          Length = 519

 Score =  821 bits (2120), Expect = 0.0
 Identities = 409/480 (85%), Positives = 436/480 (90%)
 Frame = -3

Query: 1467 IKACSTNSPDPSLIKHRRPADQNIREEARHNHLSSNTHGFSAKYVPFNADPTSDESYSLD 1288
            IKA +TN    S  KHRRPAD+NIREEAR  H SS  H FSA+YVPFNA P SDE YSLD
Sbjct: 37   IKATATNDAI-SQQKHRRPADENIREEARR-HCSS--HNFSARYVPFNAGPNSDEWYSLD 92

Query: 1287 EIVYRSRSGGLLDVQHDMEALKKFDGQYWKTLFDSRIGKTTWPYGSGVWSKKEWVLPEID 1108
            EIVYRSRSGGLLDVQHDM+ALKKFDGQYW++LFDSR+GKTTWPYGSGVWSKKEWVLPEID
Sbjct: 93   EIVYRSRSGGLLDVQHDMDALKKFDGQYWRSLFDSRVGKTTWPYGSGVWSKKEWVLPEID 152

Query: 1107 SDHIVSAFEGNSNLFWAERYGKETLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRK 928
            SD IVSAFEGNSNLFWAER+GK+ LGM DLWVKHCGISHTGSFKDLGMTVLVSQVNRLRK
Sbjct: 153  SDDIVSAFEGNSNLFWAERFGKQFLGMTDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRK 212

Query: 927  LNRPIVGVGCASTGDTSXXXXXXXXXAGIPAIVFLPTDRISMAQLVQPIANGAFVLSLDT 748
            +++P+VGVGCASTGDTS         AGIP+IVFLP ++ISMAQLVQPIANGAFVLS+DT
Sbjct: 213  MHKPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISMAQLVQPIANGAFVLSIDT 272

Query: 747  DFDGCMQLIREITAELPIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGNLGN 568
            DFDGCMQLIRE+TAELPIYLANSLNSLRLEGQKTAAIEILQQFDWEVP+WVIVPGGNLGN
Sbjct: 273  DFDGCMQLIREVTAELPIYLANSLNSLRLEGQKTAAIEILQQFDWEVPEWVIVPGGNLGN 332

Query: 567  IYAFYKGFHMCKELGLVDRMPRLVCAQAANANPLYLHYKSGYSDFKSVKANATFASAIQI 388
            IYAFYKGF MCKELGLVDR+PRLVCAQAANANPLYLHYKSG+ DFK VKAN TFASAIQI
Sbjct: 333  IYAFYKGFQMCKELGLVDRIPRLVCAQAANANPLYLHYKSGWKDFKPVKANTTFASAIQI 392

Query: 387  GDPVSIDRAVYALQNSNGIVEEATEEELMDAMAQADLSGMFICPHTGVALSALIKLRKSG 208
            GDPVSIDRAV+ALQ  NGIVEEATEEELMDAMAQAD +GMFICPHTGVAL+AL KLR SG
Sbjct: 393  GDPVSIDRAVFALQQCNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTALFKLRNSG 452

Query: 207  VIGCNDRTVVVSTAHGLKFTQSKVDYHSKSIPDMSCRFANPPVQVKADFGSVMDVLKTYL 28
            VI   DRTVVVSTAHGLKFTQSK+DYHSK I DM CRFANPPV+VKADFGSVMDVLK+YL
Sbjct: 453  VIAPTDRTVVVSTAHGLKFTQSKIDYHSKEIKDMECRFANPPVEVKADFGSVMDVLKSYL 512


>ref|XP_002514088.1| threonine synthase, putative [Ricinus communis]
            gi|223546544|gb|EEF48042.1| threonine synthase, putative
            [Ricinus communis]
          Length = 539

 Score =  816 bits (2107), Expect = 0.0
 Identities = 400/479 (83%), Positives = 436/479 (91%), Gaps = 1/479 (0%)
 Frame = -3

Query: 1461 ACSTNSPDPSLIKHRRPADQNIREEAR-HNHLSSNTHGFSAKYVPFNADPTSDESYSLDE 1285
            + S+N+  P   KHRRPA++NIR+EAR H   SS  + FSAKY+PFNA P S E YSLDE
Sbjct: 55   SASSNNTPPVTTKHRRPAEENIRDEARRHRSSSSAVNTFSAKYIPFNAPPDSREYYSLDE 114

Query: 1284 IVYRSRSGGLLDVQHDMEALKKFDGQYWKTLFDSRIGKTTWPYGSGVWSKKEWVLPEIDS 1105
            IVYRSRSGGLLDVQHDMEALKKFDG YW+ LFDSR+GKTTWPYGSGVWSKKEWVLPEID 
Sbjct: 115  IVYRSRSGGLLDVQHDMEALKKFDGGYWRDLFDSRVGKTTWPYGSGVWSKKEWVLPEIDP 174

Query: 1104 DHIVSAFEGNSNLFWAERYGKETLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKL 925
            D IVSAFEGNSNLFWAER+GK+ LGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRK+
Sbjct: 175  DDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKM 234

Query: 924  NRPIVGVGCASTGDTSXXXXXXXXXAGIPAIVFLPTDRISMAQLVQPIANGAFVLSLDTD 745
             +P+VGVGCASTGDTS         AGIP+IVFLP ++IS+AQLVQPIANGAFVLS+DTD
Sbjct: 235  KKPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISIAQLVQPIANGAFVLSIDTD 294

Query: 744  FDGCMQLIREITAELPIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGNLGNI 565
            FDGCM+LIRE+TAELPIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGNLGNI
Sbjct: 295  FDGCMKLIREVTAELPIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGNLGNI 354

Query: 564  YAFYKGFHMCKELGLVDRMPRLVCAQAANANPLYLHYKSGYSDFKSVKANATFASAIQIG 385
            YAFYKGF MC ELGLVDR+PRLVCAQAANANPLYL+YKSG+ DFK VKAN+TFASAIQIG
Sbjct: 355  YAFYKGFKMCHELGLVDRIPRLVCAQAANANPLYLYYKSGWKDFKPVKANSTFASAIQIG 414

Query: 384  DPVSIDRAVYALQNSNGIVEEATEEELMDAMAQADLSGMFICPHTGVALSALIKLRKSGV 205
            DPVSIDRAVYAL+  NGIVEEATEEELMDAMAQAD +GMFICPHTGVAL+ALIKLR SG+
Sbjct: 415  DPVSIDRAVYALKKCNGIVEEATEEELMDAMAQADSTGMFICPHTGVALTALIKLRNSGI 474

Query: 204  IGCNDRTVVVSTAHGLKFTQSKVDYHSKSIPDMSCRFANPPVQVKADFGSVMDVLKTYL 28
            IG  DRTVVVSTAHGLKFTQSK+DYHSK+IPDM+C++ANPPVQVKADFG+VMDVLKTYL
Sbjct: 475  IGPMDRTVVVSTAHGLKFTQSKIDYHSKAIPDMACKYANPPVQVKADFGAVMDVLKTYL 533


>ref|XP_004144015.1| PREDICTED: threonine synthase, chloroplastic-like [Cucumis sativus]
          Length = 532

 Score =  814 bits (2103), Expect = 0.0
 Identities = 403/489 (82%), Positives = 438/489 (89%), Gaps = 10/489 (2%)
 Frame = -3

Query: 1464 KACSTNSPDP--------SLIKHRRPADQNIREEARHNHLSS--NTHGFSAKYVPFNADP 1315
            KA S +SP P        S +K+RR AD+NI++EAR +  +S  +   FSAKYVPFNA P
Sbjct: 35   KATSDSSPSPPTNGSPPLSTLKNRRSADENIKDEARRHRAASGEDRSNFSAKYVPFNAGP 94

Query: 1314 TSDESYSLDEIVYRSRSGGLLDVQHDMEALKKFDGQYWKTLFDSRIGKTTWPYGSGVWSK 1135
             S E YSLDEIVYRSRSGGLLD+QHDMEALKK+DG YW+ LFDSR+GKTTWPYGSGVWSK
Sbjct: 95   DSTECYSLDEIVYRSRSGGLLDIQHDMEALKKYDGAYWRNLFDSRVGKTTWPYGSGVWSK 154

Query: 1134 KEWVLPEIDSDHIVSAFEGNSNLFWAERYGKETLGMNDLWVKHCGISHTGSFKDLGMTVL 955
            KEWVLPEID D IVSAFEGNSNLFWAER+GK+ LGMNDLWVKHCGISHTGSFKDLGMTVL
Sbjct: 155  KEWVLPEIDPDDIVSAFEGNSNLFWAERFGKQFLGMNDLWVKHCGISHTGSFKDLGMTVL 214

Query: 954  VSQVNRLRKLNRPIVGVGCASTGDTSXXXXXXXXXAGIPAIVFLPTDRISMAQLVQPIAN 775
            VSQVNRLRKL RP+VGVGCASTGDTS         AGIP+IVFLP ++ISMAQLVQPIAN
Sbjct: 215  VSQVNRLRKLKRPVVGVGCASTGDTSAALSAYCASAGIPSIVFLPANKISMAQLVQPIAN 274

Query: 774  GAFVLSLDTDFDGCMQLIREITAELPIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWV 595
            GAFVLS+DTDFDGCM+LIRE+TAELPIYLANSLNSLRLEGQKTAAIEILQQFDW VP+WV
Sbjct: 275  GAFVLSIDTDFDGCMKLIREVTAELPIYLANSLNSLRLEGQKTAAIEILQQFDWGVPEWV 334

Query: 594  IVPGGNLGNIYAFYKGFHMCKELGLVDRMPRLVCAQAANANPLYLHYKSGYSDFKSVKAN 415
            IVPGGNLGNIYAFYKGF MC+ELGLVDR+PRLVCAQAANANPLYLHYKSG+ DFK+VKA+
Sbjct: 335  IVPGGNLGNIYAFYKGFKMCQELGLVDRIPRLVCAQAANANPLYLHYKSGWKDFKAVKAS 394

Query: 414  ATFASAIQIGDPVSIDRAVYALQNSNGIVEEATEEELMDAMAQADLSGMFICPHTGVALS 235
            +TFASAIQIGDPVSIDRAVYALQNSNGIVEEATEEELMDAMAQAD +GMFICPHTGVAL+
Sbjct: 395  STFASAIQIGDPVSIDRAVYALQNSNGIVEEATEEELMDAMAQADSTGMFICPHTGVALT 454

Query: 234  ALIKLRKSGVIGCNDRTVVVSTAHGLKFTQSKVDYHSKSIPDMSCRFANPPVQVKADFGS 55
            ALIKLR  G+IG  DRTVVVSTAHGLKFTQSK+DYHSK IPDM+C+FANPPVQVKADFGS
Sbjct: 455  ALIKLRNKGIIGPTDRTVVVSTAHGLKFTQSKIDYHSKEIPDMACQFANPPVQVKADFGS 514

Query: 54   VMDVLKTYL 28
            VMDVLK YL
Sbjct: 515  VMDVLKDYL 523


>gb|AGA60119.1| threonine synthase [Lens culinaris]
          Length = 537

 Score =  804 bits (2077), Expect = 0.0
 Identities = 394/476 (82%), Positives = 433/476 (90%)
 Frame = -3

Query: 1455 STNSPDPSLIKHRRPADQNIREEARHNHLSSNTHGFSAKYVPFNADPTSDESYSLDEIVY 1276
            S  +P PS  KHRRPAD+NIR+EAR  ++S   H FSAKYVPFNADP+S ESYSLDEIVY
Sbjct: 56   SPATPPPSSSKHRRPADENIRDEARRINVSQ--HLFSAKYVPFNADPSSTESYSLDEIVY 113

Query: 1275 RSRSGGLLDVQHDMEALKKFDGQYWKTLFDSRIGKTTWPYGSGVWSKKEWVLPEIDSDHI 1096
            RS+SGGLLDVQHD++ALKKFDG YW+ LFDSR+GKTTWPYGSGVWSKKEWVLPEID D I
Sbjct: 114  RSQSGGLLDVQHDLDALKKFDGAYWRNLFDSRVGKTTWPYGSGVWSKKEWVLPEIDDDDI 173

Query: 1095 VSAFEGNSNLFWAERYGKETLGMNDLWVKHCGISHTGSFKDLGMTVLVSQVNRLRKLNRP 916
            VSAFEGNSNLFWAER+GK+ LGMNDLWVK+CG SHTGSFKDLGMTVLVSQVNRLRK+NRP
Sbjct: 174  VSAFEGNSNLFWAERFGKQFLGMNDLWVKNCGTSHTGSFKDLGMTVLVSQVNRLRKMNRP 233

Query: 915  IVGVGCASTGDTSXXXXXXXXXAGIPAIVFLPTDRISMAQLVQPIANGAFVLSLDTDFDG 736
            +VGVGCASTGDTS         AGIP+IVFLP +RIS+AQLVQPIANGAFVLS+DTDFDG
Sbjct: 234  VVGVGCASTGDTSAALSAYCASAGIPSIVFLPANRISIAQLVQPIANGAFVLSIDTDFDG 293

Query: 735  CMQLIREITAELPIYLANSLNSLRLEGQKTAAIEILQQFDWEVPDWVIVPGGNLGNIYAF 556
            CMQLIRE+TAELPIYLANSLNSLRLEGQKTAAIEILQQFDW+VPDWVIVPGGNLGNIYAF
Sbjct: 294  CMQLIREVTAELPIYLANSLNSLRLEGQKTAAIEILQQFDWQVPDWVIVPGGNLGNIYAF 353

Query: 555  YKGFHMCKELGLVDRMPRLVCAQAANANPLYLHYKSGYSDFKSVKANATFASAIQIGDPV 376
            YKGF MCKELGLVDR+PRLVCAQAANANPLYL++KSG+ +FK+V+A  TFASAIQIGDPV
Sbjct: 354  YKGFQMCKELGLVDRIPRLVCAQAANANPLYLYFKSGWKEFKAVRAQTTFASAIQIGDPV 413

Query: 375  SIDRAVYALQNSNGIVEEATEEELMDAMAQADLSGMFICPHTGVALSALIKLRKSGVIGC 196
            SIDRAV+AL+N NGIVEEATEEELMDAMAQAD +GMF CPHTGVAL+AL KLR SGVI  
Sbjct: 414  SIDRAVHALKNCNGIVEEATEEELMDAMAQADSTGMFTCPHTGVALTALFKLRNSGVIKP 473

Query: 195  NDRTVVVSTAHGLKFTQSKVDYHSKSIPDMSCRFANPPVQVKADFGSVMDVLKTYL 28
             DRTVVVSTAHGLKFTQSK+DYHSK+I D++C+FANPP+QVKADFGSVMDVL  YL
Sbjct: 474  TDRTVVVSTAHGLKFTQSKIDYHSKNIKDLACQFANPPMQVKADFGSVMDVLSKYL 529


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