BLASTX nr result

ID: Coptis24_contig00004935 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004935
         (967 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514361.1| conserved hypothetical protein [Ricinus comm...   333   4e-89
ref|XP_002309599.1| predicted protein [Populus trichocarpa] gi|2...   329   5e-88
ref|XP_002284759.1| PREDICTED: uncharacterized protein LOC100249...   326   6e-87
ref|NP_850062.1| uncharacterized protein [Arabidopsis thaliana] ...   313   5e-83
ref|XP_002878867.1| predicted protein [Arabidopsis lyrata subsp....   306   6e-81

>ref|XP_002514361.1| conserved hypothetical protein [Ricinus communis]
           gi|223546817|gb|EEF48315.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 205

 Score =  333 bits (854), Expect = 4e-89
 Identities = 161/198 (81%), Positives = 179/198 (90%), Gaps = 6/198 (3%)
 Frame = -2

Query: 825 TAPQSISLLFSSK--RGRDKASWFI----RACSSGADVPDFLSADWLESRRKRPFGPRLN 664
           ++PQS+S+L+ SK   G +K++  +    R  +S ADVPDFLSA+WLESRRKRPFGPRLN
Sbjct: 8   SSPQSLSVLYKSKSFNGDNKSAAAVSISPRFRASAADVPDFLSANWLESRRKRPFGPRLN 67

Query: 663 FSAEEAVQHQLDALKYNDQPRQDYGVEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIF 484
           FSAEEAVQHQLDALKYNDQPR DYG+EVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIF
Sbjct: 68  FSAEEAVQHQLDALKYNDQPRPDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIF 127

Query: 483 HHSTYRVLLGHKERKILSSFLVKESRFKQRIWIRGSRPEEEQIFQFTMVQRVGGSWDGYW 304
           HHSTYRVLLGHKERKILSS +VKE+ FKQR+WIRG+RPEEE+IFQFTMVQRVGGSWDGYW
Sbjct: 128 HHSTYRVLLGHKERKILSSLMVKENWFKQRVWIRGNRPEEEEIFQFTMVQRVGGSWDGYW 187

Query: 303 LTESLLHDGDGFAGGVAY 250
           LTESL HDGD FAGG+AY
Sbjct: 188 LTESLHHDGDAFAGGLAY 205


>ref|XP_002309599.1| predicted protein [Populus trichocarpa] gi|222855575|gb|EEE93122.1|
           predicted protein [Populus trichocarpa]
          Length = 200

 Score =  329 bits (844), Expect = 5e-88
 Identities = 163/196 (83%), Positives = 172/196 (87%), Gaps = 4/196 (2%)
 Frame = -2

Query: 825 TAPQSISLLFSSKR----GRDKASWFIRACSSGADVPDFLSADWLESRRKRPFGPRLNFS 658
           + PQS+SLL  +K     G  K     RA    ADVPDFLSADWLESRRK+PFGPRLNFS
Sbjct: 8   STPQSLSLLSKTKPIINGGDYKLGSRFRA---SADVPDFLSADWLESRRKKPFGPRLNFS 64

Query: 657 AEEAVQHQLDALKYNDQPRQDYGVEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHH 478
           AEEAV  QLDALKYNDQPRQDYG+EVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHH
Sbjct: 65  AEEAVNCQLDALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHH 124

Query: 477 STYRVLLGHKERKILSSFLVKESRFKQRIWIRGSRPEEEQIFQFTMVQRVGGSWDGYWLT 298
           STYRVLLGHKERKILSS  VKE+RFKQRIWIRG+RPEEE+IFQFTMVQRVGGSWDGYWLT
Sbjct: 125 STYRVLLGHKERKILSSLFVKENRFKQRIWIRGNRPEEEEIFQFTMVQRVGGSWDGYWLT 184

Query: 297 ESLLHDGDGFAGGVAY 250
           ESLLHDGD FAGG+AY
Sbjct: 185 ESLLHDGDAFAGGLAY 200


>ref|XP_002284759.1| PREDICTED: uncharacterized protein LOC100249178 [Vitis vinifera]
           gi|296081967|emb|CBI20972.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score =  326 bits (835), Expect = 6e-87
 Identities = 157/193 (81%), Positives = 171/193 (88%), Gaps = 1/193 (0%)
 Frame = -2

Query: 825 TAPQSISLLFSSKRGRDKASWFIRA-CSSGADVPDFLSADWLESRRKRPFGPRLNFSAEE 649
           ++PQSISL      G    S  + +   + ADVPDFLSADWLESRRKRPFGPRLNFSAEE
Sbjct: 8   SSPQSISLFSKPFHGDKPVSVSLSSRIRASADVPDFLSADWLESRRKRPFGPRLNFSAEE 67

Query: 648 AVQHQLDALKYNDQPRQDYGVEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSTY 469
           AVQ+QLDALKYNDQPRQDYG+EVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHS+Y
Sbjct: 68  AVQYQLDALKYNDQPRQDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHSSY 127

Query: 468 RVLLGHKERKILSSFLVKESRFKQRIWIRGSRPEEEQIFQFTMVQRVGGSWDGYWLTESL 289
           RVLL H+ERKILSS  VKE+RFKQR+WIRG+RPEEE+IFQFTM QRVGGSWDGYWLTESL
Sbjct: 128 RVLLCHRERKILSSLWVKENRFKQRVWIRGTRPEEEEIFQFTMFQRVGGSWDGYWLTESL 187

Query: 288 LHDGDGFAGGVAY 250
           LHDGD F+GGVAY
Sbjct: 188 LHDGDSFSGGVAY 200


>ref|NP_850062.1| uncharacterized protein [Arabidopsis thaliana]
           gi|45752742|gb|AAS76269.1| At2g25605 [Arabidopsis
           thaliana] gi|62320911|dbj|BAD93906.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|330252629|gb|AEC07723.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 200

 Score =  313 bits (801), Expect = 5e-83
 Identities = 149/196 (76%), Positives = 171/196 (87%), Gaps = 1/196 (0%)
 Frame = -2

Query: 834 LLSTAPQSISLLFSSKRGRDKASW-FIRACSSGADVPDFLSADWLESRRKRPFGPRLNFS 658
           +L + P S+S       G  + +   +RA SS  DVPDFLSADWLESRRKRPFGPRL+FS
Sbjct: 7   VLPSPPSSLSANVKHFNGYGRLNRNLVRASSS--DVPDFLSADWLESRRKRPFGPRLDFS 64

Query: 657 AEEAVQHQLDALKYNDQPRQDYGVEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHH 478
           AE+AV+HQLDALKYND PR DYG+EVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHH
Sbjct: 65  AEDAVRHQLDALKYNDHPRDDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHH 124

Query: 477 STYRVLLGHKERKILSSFLVKESRFKQRIWIRGSRPEEEQIFQFTMVQRVGGSWDGYWLT 298
           S+YRVLLGHK+RK+LSS  V+E+RFKQRIWI+G+RPEEE+IF+FTM QR+GGSWDGYWLT
Sbjct: 125 SSYRVLLGHKDRKLLSSLFVEENRFKQRIWIQGNRPEEEEIFEFTMFQRIGGSWDGYWLT 184

Query: 297 ESLLHDGDGFAGGVAY 250
           ESLLHDGD F+GG+AY
Sbjct: 185 ESLLHDGDVFSGGMAY 200


>ref|XP_002878867.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324706|gb|EFH55126.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 199

 Score =  306 bits (783), Expect = 6e-81
 Identities = 144/195 (73%), Positives = 165/195 (84%)
 Frame = -2

Query: 834 LLSTAPQSISLLFSSKRGRDKASWFIRACSSGADVPDFLSADWLESRRKRPFGPRLNFSA 655
           +L + P S+S     K   D          + +DVPDF+SADWLESRRKRPFGPRL+FSA
Sbjct: 7   VLPSPPSSLSAKL--KPFNDSGRLHRNLVRASSDVPDFISADWLESRRKRPFGPRLDFSA 64

Query: 654 EEAVQHQLDALKYNDQPRQDYGVEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHS 475
            +AV+HQLDALKYND PR DYG+EVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHS
Sbjct: 65  GDAVRHQLDALKYNDHPRDDYGIEVMYRFAGFDPFERSTYFGPFFDLGQFERFRRIFHHS 124

Query: 474 TYRVLLGHKERKILSSFLVKESRFKQRIWIRGSRPEEEQIFQFTMVQRVGGSWDGYWLTE 295
           +YRVLL HK+RKILSS  V+E+RFKQRIWI+G+RPEEE+IF+FTM QR+GGSWDGYWLTE
Sbjct: 125 SYRVLLSHKDRKILSSLFVEENRFKQRIWIQGNRPEEEEIFEFTMFQRIGGSWDGYWLTE 184

Query: 294 SLLHDGDGFAGGVAY 250
           SLLHDGD F+GG+AY
Sbjct: 185 SLLHDGDVFSGGMAY 199


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