BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004923
         (1700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78871.1| hypothetical protein VITISV_024970 [Vitis vinifera]   422   e-115
ref|XP_002266433.1| PREDICTED: uncharacterized protein LOC100263...   421   e-115
ref|XP_002532498.1| ring finger protein, putative [Ricinus commu...   368   3e-99
ref|XP_002308375.1| predicted protein [Populus trichocarpa] gi|2...   356   9e-96
ref|XP_003609509.1| RING finger protein [Medicago truncatula] gi...   337   4e-90

>emb|CAN78871.1| hypothetical protein VITISV_024970 [Vitis vinifera]
          Length = 542

 Score =  422 bits (1084), Expect = e-115
 Identities = 264/539 (48%), Positives = 320/539 (59%), Gaps = 58/539 (10%)
 Frame = +2

Query: 59   MGSSNSRLTGGGRGMKRRLS---SLLICGSNDTHDH------------DASTSNNAPTV- 190
            MGSS+SRL  G R  + RL+   S LICG + +               +A   N+  TV 
Sbjct: 1    MGSSSSRL--GSRSSRPRLNRRLSSLICGGSTSRAQPEIEDCPAELLVNAIEHNDPVTVE 58

Query: 191  ---THDMDVTMAVGDLGSSIKEV----SECSDGPSDNSSGTIDR---------KFSSRSK 322
               T +  +  + G   +S +      SE S    +++S   D          K  S SK
Sbjct: 59   QSSTKESHLASSAGTAFTSTRTETGTSSESSSAAREDTSFINDLSNIETSNRGKCLSESK 118

Query: 323  GSILSPLNVDNNAKV-PYFETTGHVGXXXXX------VAQQSLGDNLNSVSKADTGSEGR 481
              I   L  D  ++V PY+E + ++                +   N+ +V+  ++  + R
Sbjct: 119  ELIPPHLVSDEPSQVDPYWERSSNIASASFKDLHPLDPVSANARANMGAVNVHNSMDKDR 178

Query: 482  SQIRQEVVSSSTSD------------NLENTSLGIHASD---SAFVPSVTEFSLSPQS-G 613
            S     V+ SS+S             + EN   G+ A D   S  VP+VT+  ++  S G
Sbjct: 179  SNSGAGVIHSSSSHAPEHRASYSDGASAENHVSGVSAIDNSSSVSVPAVTDSPVTLHSQG 238

Query: 614  TEIAQEAAPVSPGFFT---LDSQRNRSNGGVLHVDVVTISSSALFSSSGEVSNNEARRNS 784
             E  QEA P   G       D +R R +G VLHVDVV+ISS+ L S++ EVSN EARRNS
Sbjct: 239  DESIQEAIPSGLGIVVSDRADRERGRRDGSVLHVDVVSISSNILSSTTAEVSNREARRNS 298

Query: 785  RRLFWDAFSRRGSRRHNDSRTIVFSSEDPDDLGSHDRWLLDFSGDLFEXXXXXXXXXXXX 964
            RRLFWDAFSRR SRRH+DS TIVFS++D DDLGSHDRWLLDFSGD FE            
Sbjct: 299  RRLFWDAFSRRSSRRHSDSPTIVFSTDDTDDLGSHDRWLLDFSGDFFEDGVGGDSGYLGS 358

Query: 965  XXXXTHEGRWHSRSEIWDRFRGGLDESSRRPRYCASGQHPDGTCSCESVLMGGESSTRGS 1144
                 +E RWHSRSEIW+R RGGLDESSRR   C +G HPDG CSC+S LM  ESSTR S
Sbjct: 359  RIHSMNERRWHSRSEIWERLRGGLDESSRRTTTCPTGLHPDGMCSCDSFLMAEESSTRAS 418

Query: 1145 ISRIVMLAEALFEVLDEIHRQPXXXXXXMVSVPAPESVVNSFPLKIHKKHNAAESIDQDV 1324
            ISRIVMLAEALFEVLDEIHRQP      MVS+PAPESVV+SFPLK HKK + A+S  +DV
Sbjct: 419  ISRIVMLAEALFEVLDEIHRQPVSLALSMVSLPAPESVVDSFPLKNHKKADTAQS-GEDV 477

Query: 1325 EQCYICLAEYEEGDKIRVLPCRHEYHMACVDKWLKEIHGVCPLCRGDVCANLAEGFISN 1501
             QCYICLAEYEEGDKIRVLPC HEYHM+CVDKWLKEIHGVCPLCRGDV   L  G +SN
Sbjct: 478  AQCYICLAEYEEGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDVREGLTGGSVSN 536


>ref|XP_002266433.1| PREDICTED: uncharacterized protein LOC100263653 [Vitis vinifera]
          Length = 542

 Score =  421 bits (1083), Expect = e-115
 Identities = 268/541 (49%), Positives = 319/541 (58%), Gaps = 60/541 (11%)
 Frame = +2

Query: 59   MGSSNSRLTGGGRG----MKRRLSSLLICGSN-----DTHDHDASTSNNAPTVTHDMDVT 211
            MGSS+SRL  G R     + RRLSSL+  GS      +  D  A    NA  + H+  VT
Sbjct: 1    MGSSSSRL--GSRSSRPRLNRRLSSLICGGSTSRAQPEIEDCPAELLVNA--IEHNDPVT 56

Query: 212  MA-----VGDLGSSIKEV-----------SECSDGPSDNSSGTIDR---------KFSSR 316
            +         L SS               SE S    +++S   D          K  S 
Sbjct: 57   VEQSSTKASHLASSAGTAFTSTRTETGTSSESSSAAREDTSFINDLSNIETSNRGKCLSE 116

Query: 317  SKGSILSPLNVDNNAKV-PYFETTGHVGXXXXX------VAQQSLGDNLNSVSKADTGSE 475
            SK  I   L  D  ++V PY+E + ++                +   N+ +V+  ++  +
Sbjct: 117  SKELIPPHLVSDEPSQVDPYWERSSNIASASFKDLHPLDPVSANARANMGAVNVHNSMDK 176

Query: 476  GRSQIRQEVVSSSTSD------------NLENTSLGIHASD---SAFVPSVTEFSLSPQS 610
             RS     V+ SS+S             + EN   G+ A D   S  VP+VT+  ++  S
Sbjct: 177  DRSNSGAGVIHSSSSHAPEHRASYSDGASAENHVSGVSAIDNSSSVSVPAVTDSPVTLHS 236

Query: 611  -GTEIAQEAAPVSPGFFT---LDSQRNRSNGGVLHVDVVTISSSALFSSSGEVSNNEARR 778
             G E  QEA P   G       D +R R +G VLHVDVV+ISS+ L S++ EVSN EARR
Sbjct: 237  QGDESIQEAIPSGLGIVVSDRADRERGRRDGSVLHVDVVSISSNILSSTTAEVSNREARR 296

Query: 779  NSRRLFWDAFSRRGSRRHNDSRTIVFSSEDPDDLGSHDRWLLDFSGDLFEXXXXXXXXXX 958
            NSRRLFWDAFSRR SRRH+DS TIVFS++D DDLGSHDRWLLDFSGD FE          
Sbjct: 297  NSRRLFWDAFSRRSSRRHSDSPTIVFSTDDTDDLGSHDRWLLDFSGDFFEDGVGGDSGYL 356

Query: 959  XXXXXXTHEGRWHSRSEIWDRFRGGLDESSRRPRYCASGQHPDGTCSCESVLMGGESSTR 1138
                   +E RWHSRSEIW+R RGGLDESSRR   C +G HPDG CSC+S LM  ESSTR
Sbjct: 357  GSRIHSMNERRWHSRSEIWERLRGGLDESSRRTTTCPTGLHPDGMCSCDSFLMAEESSTR 416

Query: 1139 GSISRIVMLAEALFEVLDEIHRQPXXXXXXMVSVPAPESVVNSFPLKIHKKHNAAESIDQ 1318
             SISRIVMLAEALFEVLDEIHRQP      MVS+PAPESVV+SFPLK HKK + A+S  +
Sbjct: 417  ASISRIVMLAEALFEVLDEIHRQPVSLALSMVSLPAPESVVDSFPLKNHKKADTAQS-GE 475

Query: 1319 DVEQCYICLAEYEEGDKIRVLPCRHEYHMACVDKWLKEIHGVCPLCRGDVCANLAEGFIS 1498
            DV QCYICLAEYEEGDKIRVLPC HEYHM+CVDKWLKEIHGVCPLCRGDV   L  G +S
Sbjct: 476  DVAQCYICLAEYEEGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRGDVREGLTGGSVS 535

Query: 1499 N 1501
            N
Sbjct: 536  N 536


>ref|XP_002532498.1| ring finger protein, putative [Ricinus communis]
            gi|223527773|gb|EEF29874.1| ring finger protein, putative
            [Ricinus communis]
          Length = 550

 Score =  368 bits (944), Expect = 3e-99
 Identities = 243/556 (43%), Positives = 311/556 (55%), Gaps = 65/556 (11%)
 Frame = +2

Query: 59   MGSSNSRLTGGGRGMKRRLS-------SLLICGSNDTHDH----------DASTSNNAPT 187
            MGS +SR+  G R  + R++       S L+CG + + D             S++ +   
Sbjct: 1    MGSGSSRM--GRRPSRARVNRSSSNFFSSLLCGGSSSRDSLQMENYPDEIRMSSAEHCDL 58

Query: 188  VTHDM---------------DVTMAVGDLGSSIKEVSECSDGPSD-----NSSGTIDRKF 307
            +T+++                 T +V + G+S    S  S+G S      N+  +  +K 
Sbjct: 59   ITNEIWNPAEESSFLSDTRTGSTSSVAETGASSGSKSATSEGTSAEDGFRNTETSNLQKC 118

Query: 308  SSRSKGSILSPLNVDNNAKVPYF--------ETTGHVGXXXXXVAQQSLGDNLNSVSKAD 463
             S SK  +++P  V ++     F         TT             ++  N ++ +  D
Sbjct: 119  LSESK-ELIAPYQVSDSYSRDEFCRNRSSAEATTSFKDQESSNPVSLNVSANKDAANCID 177

Query: 464  TG-SEGRSQIRQEVV--SSSTSDNL-----ENTSLGIHASDS--AF----------VPSV 583
               ++G SQI    +  SSS+S  L     + TS+  H  ++  AF          VP V
Sbjct: 178  NSENKGVSQISPNNMHPSSSSSQELGDSRVDGTSVETHMDEATGAFNSDPVSRRSDVP-V 236

Query: 584  TEFSLSPQSGTEIAQEAAPVSPGFFTLDSQRNRSNGGVLHVDVVTISSSALFSSSGEVSN 763
            T  SL    G E  QEA P   GF   + ++ + +  VLHVDVV+ISSS   SS+ + S 
Sbjct: 237  THHSL----GDESLQEAIPSGLGFLVANREQGQGDESVLHVDVVSISSSISSSSNADTST 292

Query: 764  NEARRNSRRLFWDAFSRRGSRRHNDSRTIVFSSEDPDDLGSHDRWLLDFSGDLFEXXXXX 943
             EARRNSRRLFWDAFSRR SRRH DS TIVFS+++ DDL SH+RWLLDFSGD+F+     
Sbjct: 293  REARRNSRRLFWDAFSRRSSRRHLDSPTIVFSTDNNDDLLSHERWLLDFSGDMFDDGIGG 352

Query: 944  XXXXXXXXXXXTHEGRWHSRSEIWDRFRGGLDESSRRPRYCASGQHPDGTCSCESVLMGG 1123
                        +  R HSRSEIW+R RGGLDE  RR   C SG HP G CSCES     
Sbjct: 353  DSGYLGSRIHSLNGRRRHSRSEIWERLRGGLDEHGRRTTLCPSGLHPYGICSCESFSTTE 412

Query: 1124 ESSTRGSISRIVMLAEALFEVLDEIHRQPXXXXXXMVSVPAPESVVNSFPLKIHKKHNAA 1303
            E+STR SISRIVMLAEALFEVLDEIHRQP      M+S+PAPESVV++FP++ HKK +  
Sbjct: 413  ETSTRASISRIVMLAEALFEVLDEIHRQPVSLSLSMMSLPAPESVVDAFPIRNHKKEDKV 472

Query: 1304 ESIDQDVEQCYICLAEYEEGDKIRVLPCRHEYHMACVDKWLKEIHGVCPLCRGDVCANLA 1483
               D DVEQCYICLAEYEEGDKIRVLPC HEYHMACVDKWLKEIHGVCPLCRGDV     
Sbjct: 473  VGSD-DVEQCYICLAEYEEGDKIRVLPCHHEYHMACVDKWLKEIHGVCPLCRGDVRQGTN 531

Query: 1484 EGFISNSS*SLYSPEL 1531
            +  +S S  S  + E+
Sbjct: 532  DHSVSCSESSAPNSEI 547


>ref|XP_002308375.1| predicted protein [Populus trichocarpa] gi|222854351|gb|EEE91898.1|
            predicted protein [Populus trichocarpa]
          Length = 535

 Score =  356 bits (914), Expect = 9e-96
 Identities = 203/409 (49%), Positives = 249/409 (60%), Gaps = 50/409 (12%)
 Frame = +2

Query: 425  SLGDNLNSVSKADTG-SEGRSQIRQEVVSSSTSDNLENTSLG-IHASDSAFVPSVTEFSL 598
            ++  N+++V+  D   ++G SQI   ++  S+SD    + LG  H++D++F   + E + 
Sbjct: 125  NVSTNMDAVNGIDNSENKGFSQIYPHIIHPSSSDP---SRLGDSHSNDASFDNHMGEVTD 181

Query: 599  SPQSGT------------------EIAQEAAPVSPGFFTLDSQRNRSNGGVLHVDVVTIS 724
             P S +                  E  Q++     GF   + +++R++G VLHVDVV+IS
Sbjct: 182  IPNSDSDSVTHRPDVRVTFRPTQDESIQDSVSSDLGFLVPNREQDRTDGSVLHVDVVSIS 241

Query: 725  SSALFSSSGEVSNNEARRNSRRLFWDAFSRRGSRRHNDSRTIVFSSEDPDDLGSHDRWLL 904
            SS   SS+ + SN+EARRNSRRLFWDAFSRR  RRH DS T VFS+++ DDL SHDRWLL
Sbjct: 242  SSIYSSSTSDTSNHEARRNSRRLFWDAFSRRSFRRHVDSPTTVFSTDNNDDLESHDRWLL 301

Query: 905  DFSGDLFEXXXXXXXXXXXXXXXXTHEGRWHSRS-------------------------- 1006
            +FSGD                    +E R HSRS                          
Sbjct: 302  NFSGDFLNDGIDNDSRYLGRRIHGLNERRRHSRSEILEIIRLYVDGVDCFLQSSTRPLYS 361

Query: 1007 ----EIWDRFRGGLDESSRRPRYCASGQHPDGTCSCESVLMGGESSTRGSISRIVMLAEA 1174
                EIW+R  GGLDE+ RR   C SG HPDGTCSCES+LM  E +    ISRIVMLAEA
Sbjct: 362  YCSTEIWERLHGGLDENGRRTTSCPSGLHPDGTCSCESILMTEELNAHRRISRIVMLAEA 421

Query: 1175 LFEVLDEIHRQPXXXXXXMVSVPAPESVVNSFPLKIHKKHNAAESIDQDVEQCYICLAEY 1354
            LFEVLDEIHRQP      M+S+PAPES+V+SFPLK HKK +  E  D+D EQCYICLAEY
Sbjct: 422  LFEVLDEIHRQPVSLSLSMMSLPAPESIVDSFPLKNHKKVDKVEGNDED-EQCYICLAEY 480

Query: 1355 EEGDKIRVLPCRHEYHMACVDKWLKEIHGVCPLCRGDVCANLAEGFISN 1501
            EEGDKIRVLPC HEYHMACVDKWLKEIHGVCPLCRGDV     E  I N
Sbjct: 481  EEGDKIRVLPCHHEYHMACVDKWLKEIHGVCPLCRGDVREGANEPSIPN 529


>ref|XP_003609509.1| RING finger protein [Medicago truncatula] gi|355510564|gb|AES91706.1|
            RING finger protein [Medicago truncatula]
          Length = 545

 Score =  337 bits (865), Expect = 4e-90
 Identities = 189/342 (55%), Positives = 220/342 (64%), Gaps = 6/342 (1%)
 Frame = +2

Query: 479  RSQIRQEVVSSSTSD-NLE-NTSLGIHASDSAFVPSVTEFSLS----PQSGTEIAQEAAP 640
            RS I QE  +SS+ + ++E NT  GI    S+   S    +L     P+ G     E  P
Sbjct: 198  RSPISQEYGNSSSGEISVEINTDAGISIHSSSIPVSQASNTLPASQVPEDGAR--HETLP 255

Query: 641  VSPGFFTLDSQRNRSNGGVLHVDVVTISSSALFSSSGEVSNNEARRNSRRLFWDAFSRRG 820
               G    + +    N G+  VDVV ISS+ L  S+G+  +++ARRNSRRLFWDAFS+R 
Sbjct: 256  SGLGILVSNREIVHGNDGLFQVDVVAISSNILSGSNGDADDHDARRNSRRLFWDAFSQRS 315

Query: 821  SRRHNDSRTIVFSSEDPDDLGSHDRWLLDFSGDLFEXXXXXXXXXXXXXXXXTHEGRWHS 1000
            SRR  DS TIVFSS   DDLGSHDRW +DF  DL                   +E   +S
Sbjct: 316  SRRLGDSPTIVFSSGGTDDLGSHDRWHVDFDEDLSNYGVGGASGHRGSRIHRLNERVRNS 375

Query: 1001 RSEIWDRFRGGLDESSRRPRYCASGQHPDGTCSCESVLMGGESSTRGSISRIVMLAEALF 1180
            RSEIW+R RGGLDE  R    C  G H DG CSCES  M  ESSTR SISRIVMLAEALF
Sbjct: 376  RSEIWERLRGGLDEIGRLNTSCPLGLHADGMCSCESFPMAEESSTRSSISRIVMLAEALF 435

Query: 1181 EVLDEIHRQPXXXXXXMVSVPAPESVVNSFPLKIHKKHNAAESIDQDVEQCYICLAEYEE 1360
            EVLDEIHRQP        S+PAPESVV+SFPLK HKK +AA+    D EQCYICLAEYE+
Sbjct: 436  EVLDEIHRQPGSQSLS-TSLPAPESVVDSFPLKSHKKVDAADG-GNDAEQCYICLAEYED 493

Query: 1361 GDKIRVLPCRHEYHMACVDKWLKEIHGVCPLCRGDVCANLAE 1486
            GD+IRVLPC+HEYHM+CVDKWLKEIHGVCPLCR +VC  L E
Sbjct: 494  GDQIRVLPCKHEYHMSCVDKWLKEIHGVCPLCRSNVCGGLTE 535