BLASTX nr result
ID: Coptis24_contig00004920
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004920 (968 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI21098.3| unnamed protein product [Vitis vinifera] 107 8e-27 ref|XP_002308688.1| predicted protein [Populus trichocarpa] gi|2... 96 2e-21 emb|CAC03451.1| putative protein [Arabidopsis thaliana] 93 1e-19 sp|Q84VX3.2|ALF4_ARATH RecName: Full=Aberrant root formation pro... 93 1e-19 ref|NP_001154704.1| Aberrant root formation protein 4 [Arabidops... 93 1e-19 >emb|CBI21098.3| unnamed protein product [Vitis vinifera] Length = 606 Score = 107 bits (268), Expect(2) = 8e-27 Identities = 53/112 (47%), Positives = 75/112 (66%) Frame = +1 Query: 547 DALSFVLPKLVFRFLSVSKELFQIG*RILDRLISTCSPRDMLTVTCEVLYTHKEMCKEPA 726 DALSF LPK V +F VS + +I I+++ ++TCSPRD++ + CE L M K P Sbjct: 92 DALSFELPKAVAKFACVSGKCLEIVESIVNQFVATCSPRDLIPIFCEALDVPSGMSKAPN 151 Query: 727 SFTPLFAALSKVLISLQRRHFEHIKEALPAVLKVLQAVSSELDDETQDSYQL 882 + P + LSKV +S+ RRHFE +KEA+P +L VL+A++SELDDE +S L Sbjct: 152 YYAPFLSGLSKVFLSIPRRHFEQVKEAVPVILSVLKAMTSELDDEDTNSEDL 203 Score = 39.7 bits (91), Expect(2) = 8e-27 Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 5/94 (5%) Frame = +3 Query: 222 LMVNLEGILNSLSQCSTGIETLE-----TSVSELVEFIDYVHDNTILXXXXXXXXXXXLA 386 L++ L+ IL S CS IET + +SVSELV ++D + D + + Sbjct: 16 LVLRLQQILTS---CSRSIETGDLHKSGSSVSELVNYLDSISDAAL----------SDTS 62 Query: 387 NQVSKENALKTLNHLLAFISSPSLNQV*F*PLSF 488 N+ S+ NAL+ L+ + +I P L+Q LSF Sbjct: 63 NEESRNNALEVLSEIHLYICQPLLDQAVVDALSF 96 >ref|XP_002308688.1| predicted protein [Populus trichocarpa] gi|222854664|gb|EEE92211.1| predicted protein [Populus trichocarpa] Length = 568 Score = 95.9 bits (237), Expect(2) = 2e-21 Identities = 56/139 (40%), Positives = 79/139 (56%) Frame = +1 Query: 547 DALSFVLPKLVFRFLSVSKELFQIG*RILDRLISTCSPRDMLTVTCEVLYTHKEMCKEPA 726 DALSF LPK V +F +S E +I I+D I CSPRDML + CE L + M Sbjct: 53 DALSFELPKAVSKFAGLSNECLRIADSIIDFFIENCSPRDMLPILCEALDSWNGMVHAYD 112 Query: 727 SFTPLFAALSKVLISLQRRHFEHIKEALPAVLKVLQAVSSELDDETQDSYQLNRQLKQCP 906 PL + +SKVL+++QRRHFE +K A+P +L VL+AV SE +D+ +N ++ Sbjct: 113 FVAPLLSGISKVLLAIQRRHFEQVKVAVPVILNVLKAVCSEF--SARDTECMNLFIRALG 170 Query: 907 R*GSRRGISAQIHTALFVK 963 S R I A++ + K Sbjct: 171 IADSIRAICAKLEGRVLEK 189 Score = 33.1 bits (74), Expect(2) = 2e-21 Identities = 23/67 (34%), Positives = 34/67 (50%) Frame = +3 Query: 288 ETSVSELVEFIDYVHDNTILXXXXXXXXXXXLANQVSKENALKTLNHLLAFISSPSLNQV 467 E SV+ELV+FID V D+ + + + NA++ L+ F+ SPSL+Q Sbjct: 1 EKSVAELVDFIDSVSDSAVSNH----------EDSDEQGNAVEVLSETHKFLLSPSLDQA 50 Query: 468 *F*PLSF 488 LSF Sbjct: 51 VIDALSF 57 >emb|CAC03451.1| putative protein [Arabidopsis thaliana] Length = 655 Score = 93.2 bits (230), Expect(2) = 1e-19 Identities = 47/110 (42%), Positives = 66/110 (60%) Frame = +1 Query: 547 DALSFVLPKLVFRFLSVSKELFQIG*RILDRLISTCSPRDMLTVTCEVLYTHKEMCKEPA 726 DALSF LPK+ +F +S Q+ I+DR + C+PRDML++ CE L + Sbjct: 144 DALSFHLPKVTSKFADISSRCLQLVEEIVDRFVEACNPRDMLSILCEALDAARCYHSAST 203 Query: 727 SFTPLFAALSKVLISLQRRHFEHIKEALPAVLKVLQAVSSELDDETQDSY 876 TPL LSKV I +QRRH+E +K A+P VL VL+ +S E D + +D + Sbjct: 204 CSTPLLHGLSKVFILIQRRHYEQLKVAVPIVLNVLKDISLETDVQVEDLF 253 Score = 30.0 bits (66), Expect(2) = 1e-19 Identities = 19/73 (26%), Positives = 36/73 (49%) Frame = +3 Query: 273 GIETLETSVSELVEFIDYVHDNTILXXXXXXXXXXXLANQVSKENALKTLNHLLAFISSP 452 G + E+ V+ELV +D +++N L N++ + + L+ +L +SSP Sbjct: 87 GFQDFESFVTELVSCLDSLYENVALDAN----------NELENDVIEEVLDEILKVLSSP 136 Query: 453 SLNQV*F*PLSFY 491 ++Q LSF+ Sbjct: 137 QMDQDVIDALSFH 149 >sp|Q84VX3.2|ALF4_ARATH RecName: Full=Aberrant root formation protein 4 Length = 626 Score = 93.2 bits (230), Expect(2) = 1e-19 Identities = 47/110 (42%), Positives = 66/110 (60%) Frame = +1 Query: 547 DALSFVLPKLVFRFLSVSKELFQIG*RILDRLISTCSPRDMLTVTCEVLYTHKEMCKEPA 726 DALSF LPK+ +F +S Q+ I+DR + C+PRDML++ CE L + Sbjct: 119 DALSFHLPKVTSKFADISSRCLQLVEEIVDRFVEACNPRDMLSILCEALDAARCYHSAST 178 Query: 727 SFTPLFAALSKVLISLQRRHFEHIKEALPAVLKVLQAVSSELDDETQDSY 876 TPL LSKV I +QRRH+E +K A+P VL VL+ +S E D + +D + Sbjct: 179 CSTPLLHGLSKVFILIQRRHYEQLKVAVPIVLNVLKDISLETDVQVEDLF 228 Score = 30.0 bits (66), Expect(2) = 1e-19 Identities = 19/73 (26%), Positives = 36/73 (49%) Frame = +3 Query: 273 GIETLETSVSELVEFIDYVHDNTILXXXXXXXXXXXLANQVSKENALKTLNHLLAFISSP 452 G + E+ V+ELV +D +++N L N++ + + L+ +L +SSP Sbjct: 62 GFQDFESFVTELVSCLDSLYENVALDAN----------NELENDVIEEVLDEILKVLSSP 111 Query: 453 SLNQV*F*PLSFY 491 ++Q LSF+ Sbjct: 112 QMDQDVIDALSFH 124 >ref|NP_001154704.1| Aberrant root formation protein 4 [Arabidopsis thaliana] gi|332004243|gb|AED91626.1| Aberrant root formation protein 4 [Arabidopsis thaliana] Length = 602 Score = 93.2 bits (230), Expect(2) = 1e-19 Identities = 47/110 (42%), Positives = 66/110 (60%) Frame = +1 Query: 547 DALSFVLPKLVFRFLSVSKELFQIG*RILDRLISTCSPRDMLTVTCEVLYTHKEMCKEPA 726 DALSF LPK+ +F +S Q+ I+DR + C+PRDML++ CE L + Sbjct: 95 DALSFHLPKVTSKFADISSRCLQLVEEIVDRFVEACNPRDMLSILCEALDAARCYHSAST 154 Query: 727 SFTPLFAALSKVLISLQRRHFEHIKEALPAVLKVLQAVSSELDDETQDSY 876 TPL LSKV I +QRRH+E +K A+P VL VL+ +S E D + +D + Sbjct: 155 CSTPLLHGLSKVFILIQRRHYEQLKVAVPIVLNVLKDISLETDVQVEDLF 204 Score = 30.0 bits (66), Expect(2) = 1e-19 Identities = 19/73 (26%), Positives = 36/73 (49%) Frame = +3 Query: 273 GIETLETSVSELVEFIDYVHDNTILXXXXXXXXXXXLANQVSKENALKTLNHLLAFISSP 452 G + E+ V+ELV +D +++N L N++ + + L+ +L +SSP Sbjct: 38 GFQDFESFVTELVSCLDSLYENVALDAN----------NELENDVIEEVLDEILKVLSSP 87 Query: 453 SLNQV*F*PLSFY 491 ++Q LSF+ Sbjct: 88 QMDQDVIDALSFH 100