BLASTX nr result
ID: Coptis24_contig00004919
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004919
(292 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB33421.1| putative senescence-associated protein [Pisum sa... 103 3e-30
gb|AGB85033.1| senescence-associated protein, partial [Auxenochl... 114 3e-26
ref|XP_003627732.1| ATP synthase subunit beta [Medicago truncatu... 103 3e-25
ref|XP_003614396.1| hypothetical protein MTR_5g051150 [Medicago ... 103 8e-25
ref|XP_003614383.1| hypothetical protein MTR_5g051000 [Medicago ... 103 8e-25
>dbj|BAB33421.1| putative senescence-associated protein [Pisum sativum]
Length = 282
Score = 103 bits (256), Expect(2) = 3e-30
Identities = 48/53 (90%), Positives = 48/53 (90%)
Frame = +2
Query: 134 HQ*GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292
HQ GKTNLSHDGL PAHVPY WVNNPTL EFCF MIGRADIEGSKSNVAMNAW
Sbjct: 57 HQWGKTNLSHDGLIPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAW 109
Score = 53.9 bits (128), Expect(2) = 3e-30
Identities = 28/42 (66%), Positives = 30/42 (71%)
Frame = +1
Query: 1 DLEAFSHNPADGSVAALPGQTAAKTNYLNQRFLSY*IELPLR 126
DLEAFSHNP GS A L Q +A TN NQRFLSY +EL LR
Sbjct: 13 DLEAFSHNPTHGSFAPLAFQPSAMTNCANQRFLSYYVELLLR 54
>gb|AGB85033.1| senescence-associated protein, partial [Auxenochlorella
protothecoides]
Length = 178
Score = 114 bits (284), Expect(2) = 3e-26
Identities = 58/73 (79%), Positives = 62/73 (84%)
Frame = +2
Query: 74 PII*INGSSRTKLNYRCGDLHQ*GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRAD 253
PII +GSSRT+ +Y G + Q GKTNLSHDGLNPAHVPY WVNNPTL EFCF MIGRAD
Sbjct: 38 PIIRTDGSSRTESDYY-GGIEQQGKTNLSHDGLNPAHVPY-WVNNPTLGEFCFTMIGRAD 95
Query: 254 IEGSKSNVAMNAW 292
IEGSKSNVAMNAW
Sbjct: 96 IEGSKSNVAMNAW 108
Score = 29.6 bits (65), Expect(2) = 3e-26
Identities = 15/23 (65%), Positives = 17/23 (73%)
Frame = +1
Query: 1 DLEAFSHNPADGSVAALPGQTAA 69
DLEAFS P DGS+A PGQ +A
Sbjct: 15 DLEAFSR-PTDGSLAPSPGQASA 36
>ref|XP_003627732.1| ATP synthase subunit beta [Medicago truncatula]
gi|355521754|gb|AET02208.1| ATP synthase subunit beta
[Medicago truncatula]
Length = 1098
Score = 103 bits (256), Expect(2) = 3e-25
Identities = 47/50 (94%), Positives = 47/50 (94%)
Frame = +2
Query: 143 GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292
GKTNLSHDGLNPAHVPY WVNNPTL EFCF MIGRADIEGSKSNVAMNAW
Sbjct: 369 GKTNLSHDGLNPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAW 418
Score = 37.0 bits (84), Expect(2) = 3e-25
Identities = 18/26 (69%), Positives = 19/26 (73%)
Frame = +1
Query: 1 DLEAFSHNPADGSVAALPGQTAAKTN 78
DLEAFSHNPA GS A L Q +A TN
Sbjct: 342 DLEAFSHNPAHGSFAPLAFQPSAMTN 367
>ref|XP_003614396.1| hypothetical protein MTR_5g051150 [Medicago truncatula]
gi|355515731|gb|AES97354.1| hypothetical protein
MTR_5g051150 [Medicago truncatula]
Length = 2133
Score = 103 bits (256), Expect(2) = 8e-25
Identities = 47/50 (94%), Positives = 47/50 (94%)
Frame = +2
Query: 143 GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292
GKTNLSHDGLNPAHVPY WVNNPTL EFCF MIGRADIEGSKSNVAMNAW
Sbjct: 1285 GKTNLSHDGLNPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAW 1334
Score = 35.4 bits (80), Expect(2) = 8e-25
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +1
Query: 1 DLEAFSHNPADGSVAALPGQTAAKTN 78
DLEAFSHNP GS A L Q +A TN
Sbjct: 1258 DLEAFSHNPTHGSFAPLAFQPSAMTN 1283
Score = 103 bits (256), Expect(2) = 1e-24
Identities = 47/50 (94%), Positives = 47/50 (94%)
Frame = +2
Query: 143 GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292
GKTNLSHDGLNPAHVPY WVNNPTL EFCF MIGRADIEGSKSNVAMNAW
Sbjct: 1406 GKTNLSHDGLNPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAW 1455
Score = 34.7 bits (78), Expect(2) = 1e-24
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +1
Query: 1 DLEAFSHNPADGSVAALPGQTAAKTN 78
DLEAFSHNP GS A L Q +A TN
Sbjct: 1379 DLEAFSHNPTHGSFAPLAFQPSAITN 1404
Score = 96.3 bits (238), Expect(2) = 9e-23
Identities = 44/50 (88%), Positives = 45/50 (90%)
Frame = +2
Query: 143 GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292
GKTNLSHDGLNPAH+P WVNNPTL EFCF MIG ADIEGSKSNVAMNAW
Sbjct: 455 GKTNLSHDGLNPAHIPCWWVNNPTLGEFCFTMIGIADIEGSKSNVAMNAW 504
Score = 35.4 bits (80), Expect(2) = 9e-23
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +1
Query: 1 DLEAFSHNPADGSVAALPGQTAAKTN 78
DLEAFSHNP GS A L Q +A TN
Sbjct: 428 DLEAFSHNPTHGSFAPLAFQPSAMTN 453
>ref|XP_003614383.1| hypothetical protein MTR_5g051000 [Medicago truncatula]
gi|355515718|gb|AES97341.1| hypothetical protein
MTR_5g051000 [Medicago truncatula]
Length = 1735
Score = 103 bits (256), Expect(2) = 8e-25
Identities = 47/50 (94%), Positives = 47/50 (94%)
Frame = +2
Query: 143 GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292
GKTNLSHDGLNPAHVPY WVNNPTL EFCF MIGRADIEGSKSNVAMNAW
Sbjct: 48 GKTNLSHDGLNPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAW 97
Score = 35.4 bits (80), Expect(2) = 8e-25
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +1
Query: 1 DLEAFSHNPADGSVAALPGQTAAKTN 78
DLEAFSHNP GS A L Q +A TN
Sbjct: 21 DLEAFSHNPTHGSFAPLAFQPSAMTN 46
Score = 100 bits (250), Expect(2) = 4e-24
Identities = 46/50 (92%), Positives = 46/50 (92%)
Frame = +2
Query: 143 GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292
GKTNLSHDGLNPAHVPY WVNNPTL E CF MIGRADIEGSKSNVAMNAW
Sbjct: 608 GKTNLSHDGLNPAHVPYWWVNNPTLGELCFTMIGRADIEGSKSNVAMNAW 657
Score = 35.4 bits (80), Expect(2) = 4e-24
Identities = 17/26 (65%), Positives = 18/26 (69%)
Frame = +1
Query: 1 DLEAFSHNPADGSVAALPGQTAAKTN 78
DLEAFSHNP GS A L Q +A TN
Sbjct: 581 DLEAFSHNPTHGSFAPLAFQPSAMTN 606