BLASTX nr result

ID: Coptis24_contig00004919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004919
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB33421.1| putative senescence-associated protein [Pisum sa...   103   3e-30
gb|AGB85033.1| senescence-associated protein, partial [Auxenochl...   114   3e-26
ref|XP_003627732.1| ATP synthase subunit beta [Medicago truncatu...   103   3e-25
ref|XP_003614396.1| hypothetical protein MTR_5g051150 [Medicago ...   103   8e-25
ref|XP_003614383.1| hypothetical protein MTR_5g051000 [Medicago ...   103   8e-25

>dbj|BAB33421.1| putative senescence-associated protein [Pisum sativum]
          Length = 282

 Score =  103 bits (256), Expect(2) = 3e-30
 Identities = 48/53 (90%), Positives = 48/53 (90%)
 Frame = +2

Query: 134 HQ*GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292
           HQ GKTNLSHDGL PAHVPY WVNNPTL EFCF MIGRADIEGSKSNVAMNAW
Sbjct: 57  HQWGKTNLSHDGLIPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAW 109



 Score = 53.9 bits (128), Expect(2) = 3e-30
 Identities = 28/42 (66%), Positives = 30/42 (71%)
 Frame = +1

Query: 1   DLEAFSHNPADGSVAALPGQTAAKTNYLNQRFLSY*IELPLR 126
           DLEAFSHNP  GS A L  Q +A TN  NQRFLSY +EL LR
Sbjct: 13  DLEAFSHNPTHGSFAPLAFQPSAMTNCANQRFLSYYVELLLR 54


>gb|AGB85033.1| senescence-associated protein, partial [Auxenochlorella
           protothecoides]
          Length = 178

 Score =  114 bits (284), Expect(2) = 3e-26
 Identities = 58/73 (79%), Positives = 62/73 (84%)
 Frame = +2

Query: 74  PII*INGSSRTKLNYRCGDLHQ*GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRAD 253
           PII  +GSSRT+ +Y  G + Q GKTNLSHDGLNPAHVPY WVNNPTL EFCF MIGRAD
Sbjct: 38  PIIRTDGSSRTESDYY-GGIEQQGKTNLSHDGLNPAHVPY-WVNNPTLGEFCFTMIGRAD 95

Query: 254 IEGSKSNVAMNAW 292
           IEGSKSNVAMNAW
Sbjct: 96  IEGSKSNVAMNAW 108



 Score = 29.6 bits (65), Expect(2) = 3e-26
 Identities = 15/23 (65%), Positives = 17/23 (73%)
 Frame = +1

Query: 1  DLEAFSHNPADGSVAALPGQTAA 69
          DLEAFS  P DGS+A  PGQ +A
Sbjct: 15 DLEAFSR-PTDGSLAPSPGQASA 36


>ref|XP_003627732.1| ATP synthase subunit beta [Medicago truncatula]
           gi|355521754|gb|AET02208.1| ATP synthase subunit beta
           [Medicago truncatula]
          Length = 1098

 Score =  103 bits (256), Expect(2) = 3e-25
 Identities = 47/50 (94%), Positives = 47/50 (94%)
 Frame = +2

Query: 143 GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292
           GKTNLSHDGLNPAHVPY WVNNPTL EFCF MIGRADIEGSKSNVAMNAW
Sbjct: 369 GKTNLSHDGLNPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAW 418



 Score = 37.0 bits (84), Expect(2) = 3e-25
 Identities = 18/26 (69%), Positives = 19/26 (73%)
 Frame = +1

Query: 1   DLEAFSHNPADGSVAALPGQTAAKTN 78
           DLEAFSHNPA GS A L  Q +A TN
Sbjct: 342 DLEAFSHNPAHGSFAPLAFQPSAMTN 367


>ref|XP_003614396.1| hypothetical protein MTR_5g051150 [Medicago truncatula]
            gi|355515731|gb|AES97354.1| hypothetical protein
            MTR_5g051150 [Medicago truncatula]
          Length = 2133

 Score =  103 bits (256), Expect(2) = 8e-25
 Identities = 47/50 (94%), Positives = 47/50 (94%)
 Frame = +2

Query: 143  GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292
            GKTNLSHDGLNPAHVPY WVNNPTL EFCF MIGRADIEGSKSNVAMNAW
Sbjct: 1285 GKTNLSHDGLNPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAW 1334



 Score = 35.4 bits (80), Expect(2) = 8e-25
 Identities = 17/26 (65%), Positives = 18/26 (69%)
 Frame = +1

Query: 1    DLEAFSHNPADGSVAALPGQTAAKTN 78
            DLEAFSHNP  GS A L  Q +A TN
Sbjct: 1258 DLEAFSHNPTHGSFAPLAFQPSAMTN 1283



 Score =  103 bits (256), Expect(2) = 1e-24
 Identities = 47/50 (94%), Positives = 47/50 (94%)
 Frame = +2

Query: 143  GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292
            GKTNLSHDGLNPAHVPY WVNNPTL EFCF MIGRADIEGSKSNVAMNAW
Sbjct: 1406 GKTNLSHDGLNPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAW 1455



 Score = 34.7 bits (78), Expect(2) = 1e-24
 Identities = 17/26 (65%), Positives = 18/26 (69%)
 Frame = +1

Query: 1    DLEAFSHNPADGSVAALPGQTAAKTN 78
            DLEAFSHNP  GS A L  Q +A TN
Sbjct: 1379 DLEAFSHNPTHGSFAPLAFQPSAITN 1404



 Score = 96.3 bits (238), Expect(2) = 9e-23
 Identities = 44/50 (88%), Positives = 45/50 (90%)
 Frame = +2

Query: 143 GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292
           GKTNLSHDGLNPAH+P  WVNNPTL EFCF MIG ADIEGSKSNVAMNAW
Sbjct: 455 GKTNLSHDGLNPAHIPCWWVNNPTLGEFCFTMIGIADIEGSKSNVAMNAW 504



 Score = 35.4 bits (80), Expect(2) = 9e-23
 Identities = 17/26 (65%), Positives = 18/26 (69%)
 Frame = +1

Query: 1   DLEAFSHNPADGSVAALPGQTAAKTN 78
           DLEAFSHNP  GS A L  Q +A TN
Sbjct: 428 DLEAFSHNPTHGSFAPLAFQPSAMTN 453


>ref|XP_003614383.1| hypothetical protein MTR_5g051000 [Medicago truncatula]
           gi|355515718|gb|AES97341.1| hypothetical protein
           MTR_5g051000 [Medicago truncatula]
          Length = 1735

 Score =  103 bits (256), Expect(2) = 8e-25
 Identities = 47/50 (94%), Positives = 47/50 (94%)
 Frame = +2

Query: 143 GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292
           GKTNLSHDGLNPAHVPY WVNNPTL EFCF MIGRADIEGSKSNVAMNAW
Sbjct: 48  GKTNLSHDGLNPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAW 97



 Score = 35.4 bits (80), Expect(2) = 8e-25
 Identities = 17/26 (65%), Positives = 18/26 (69%)
 Frame = +1

Query: 1  DLEAFSHNPADGSVAALPGQTAAKTN 78
          DLEAFSHNP  GS A L  Q +A TN
Sbjct: 21 DLEAFSHNPTHGSFAPLAFQPSAMTN 46



 Score =  100 bits (250), Expect(2) = 4e-24
 Identities = 46/50 (92%), Positives = 46/50 (92%)
 Frame = +2

Query: 143 GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292
           GKTNLSHDGLNPAHVPY WVNNPTL E CF MIGRADIEGSKSNVAMNAW
Sbjct: 608 GKTNLSHDGLNPAHVPYWWVNNPTLGELCFTMIGRADIEGSKSNVAMNAW 657



 Score = 35.4 bits (80), Expect(2) = 4e-24
 Identities = 17/26 (65%), Positives = 18/26 (69%)
 Frame = +1

Query: 1   DLEAFSHNPADGSVAALPGQTAAKTN 78
           DLEAFSHNP  GS A L  Q +A TN
Sbjct: 581 DLEAFSHNPTHGSFAPLAFQPSAMTN 606


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