BLASTX nr result
ID: Coptis24_contig00004919
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004919 (292 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAB33421.1| putative senescence-associated protein [Pisum sa... 103 3e-30 gb|AGB85033.1| senescence-associated protein, partial [Auxenochl... 114 3e-26 ref|XP_003627732.1| ATP synthase subunit beta [Medicago truncatu... 103 3e-25 ref|XP_003614396.1| hypothetical protein MTR_5g051150 [Medicago ... 103 8e-25 ref|XP_003614383.1| hypothetical protein MTR_5g051000 [Medicago ... 103 8e-25 >dbj|BAB33421.1| putative senescence-associated protein [Pisum sativum] Length = 282 Score = 103 bits (256), Expect(2) = 3e-30 Identities = 48/53 (90%), Positives = 48/53 (90%) Frame = +2 Query: 134 HQ*GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292 HQ GKTNLSHDGL PAHVPY WVNNPTL EFCF MIGRADIEGSKSNVAMNAW Sbjct: 57 HQWGKTNLSHDGLIPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAW 109 Score = 53.9 bits (128), Expect(2) = 3e-30 Identities = 28/42 (66%), Positives = 30/42 (71%) Frame = +1 Query: 1 DLEAFSHNPADGSVAALPGQTAAKTNYLNQRFLSY*IELPLR 126 DLEAFSHNP GS A L Q +A TN NQRFLSY +EL LR Sbjct: 13 DLEAFSHNPTHGSFAPLAFQPSAMTNCANQRFLSYYVELLLR 54 >gb|AGB85033.1| senescence-associated protein, partial [Auxenochlorella protothecoides] Length = 178 Score = 114 bits (284), Expect(2) = 3e-26 Identities = 58/73 (79%), Positives = 62/73 (84%) Frame = +2 Query: 74 PII*INGSSRTKLNYRCGDLHQ*GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRAD 253 PII +GSSRT+ +Y G + Q GKTNLSHDGLNPAHVPY WVNNPTL EFCF MIGRAD Sbjct: 38 PIIRTDGSSRTESDYY-GGIEQQGKTNLSHDGLNPAHVPY-WVNNPTLGEFCFTMIGRAD 95 Query: 254 IEGSKSNVAMNAW 292 IEGSKSNVAMNAW Sbjct: 96 IEGSKSNVAMNAW 108 Score = 29.6 bits (65), Expect(2) = 3e-26 Identities = 15/23 (65%), Positives = 17/23 (73%) Frame = +1 Query: 1 DLEAFSHNPADGSVAALPGQTAA 69 DLEAFS P DGS+A PGQ +A Sbjct: 15 DLEAFSR-PTDGSLAPSPGQASA 36 >ref|XP_003627732.1| ATP synthase subunit beta [Medicago truncatula] gi|355521754|gb|AET02208.1| ATP synthase subunit beta [Medicago truncatula] Length = 1098 Score = 103 bits (256), Expect(2) = 3e-25 Identities = 47/50 (94%), Positives = 47/50 (94%) Frame = +2 Query: 143 GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292 GKTNLSHDGLNPAHVPY WVNNPTL EFCF MIGRADIEGSKSNVAMNAW Sbjct: 369 GKTNLSHDGLNPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAW 418 Score = 37.0 bits (84), Expect(2) = 3e-25 Identities = 18/26 (69%), Positives = 19/26 (73%) Frame = +1 Query: 1 DLEAFSHNPADGSVAALPGQTAAKTN 78 DLEAFSHNPA GS A L Q +A TN Sbjct: 342 DLEAFSHNPAHGSFAPLAFQPSAMTN 367 >ref|XP_003614396.1| hypothetical protein MTR_5g051150 [Medicago truncatula] gi|355515731|gb|AES97354.1| hypothetical protein MTR_5g051150 [Medicago truncatula] Length = 2133 Score = 103 bits (256), Expect(2) = 8e-25 Identities = 47/50 (94%), Positives = 47/50 (94%) Frame = +2 Query: 143 GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292 GKTNLSHDGLNPAHVPY WVNNPTL EFCF MIGRADIEGSKSNVAMNAW Sbjct: 1285 GKTNLSHDGLNPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAW 1334 Score = 35.4 bits (80), Expect(2) = 8e-25 Identities = 17/26 (65%), Positives = 18/26 (69%) Frame = +1 Query: 1 DLEAFSHNPADGSVAALPGQTAAKTN 78 DLEAFSHNP GS A L Q +A TN Sbjct: 1258 DLEAFSHNPTHGSFAPLAFQPSAMTN 1283 Score = 103 bits (256), Expect(2) = 1e-24 Identities = 47/50 (94%), Positives = 47/50 (94%) Frame = +2 Query: 143 GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292 GKTNLSHDGLNPAHVPY WVNNPTL EFCF MIGRADIEGSKSNVAMNAW Sbjct: 1406 GKTNLSHDGLNPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAW 1455 Score = 34.7 bits (78), Expect(2) = 1e-24 Identities = 17/26 (65%), Positives = 18/26 (69%) Frame = +1 Query: 1 DLEAFSHNPADGSVAALPGQTAAKTN 78 DLEAFSHNP GS A L Q +A TN Sbjct: 1379 DLEAFSHNPTHGSFAPLAFQPSAITN 1404 Score = 96.3 bits (238), Expect(2) = 9e-23 Identities = 44/50 (88%), Positives = 45/50 (90%) Frame = +2 Query: 143 GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292 GKTNLSHDGLNPAH+P WVNNPTL EFCF MIG ADIEGSKSNVAMNAW Sbjct: 455 GKTNLSHDGLNPAHIPCWWVNNPTLGEFCFTMIGIADIEGSKSNVAMNAW 504 Score = 35.4 bits (80), Expect(2) = 9e-23 Identities = 17/26 (65%), Positives = 18/26 (69%) Frame = +1 Query: 1 DLEAFSHNPADGSVAALPGQTAAKTN 78 DLEAFSHNP GS A L Q +A TN Sbjct: 428 DLEAFSHNPTHGSFAPLAFQPSAMTN 453 >ref|XP_003614383.1| hypothetical protein MTR_5g051000 [Medicago truncatula] gi|355515718|gb|AES97341.1| hypothetical protein MTR_5g051000 [Medicago truncatula] Length = 1735 Score = 103 bits (256), Expect(2) = 8e-25 Identities = 47/50 (94%), Positives = 47/50 (94%) Frame = +2 Query: 143 GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292 GKTNLSHDGLNPAHVPY WVNNPTL EFCF MIGRADIEGSKSNVAMNAW Sbjct: 48 GKTNLSHDGLNPAHVPYWWVNNPTLGEFCFTMIGRADIEGSKSNVAMNAW 97 Score = 35.4 bits (80), Expect(2) = 8e-25 Identities = 17/26 (65%), Positives = 18/26 (69%) Frame = +1 Query: 1 DLEAFSHNPADGSVAALPGQTAAKTN 78 DLEAFSHNP GS A L Q +A TN Sbjct: 21 DLEAFSHNPTHGSFAPLAFQPSAMTN 46 Score = 100 bits (250), Expect(2) = 4e-24 Identities = 46/50 (92%), Positives = 46/50 (92%) Frame = +2 Query: 143 GKTNLSHDGLNPAHVPY*WVNNPTLTEFCFGMIGRADIEGSKSNVAMNAW 292 GKTNLSHDGLNPAHVPY WVNNPTL E CF MIGRADIEGSKSNVAMNAW Sbjct: 608 GKTNLSHDGLNPAHVPYWWVNNPTLGELCFTMIGRADIEGSKSNVAMNAW 657 Score = 35.4 bits (80), Expect(2) = 4e-24 Identities = 17/26 (65%), Positives = 18/26 (69%) Frame = +1 Query: 1 DLEAFSHNPADGSVAALPGQTAAKTN 78 DLEAFSHNP GS A L Q +A TN Sbjct: 581 DLEAFSHNPTHGSFAPLAFQPSAMTN 606