BLASTX nr result

ID: Coptis24_contig00004918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004918
         (291 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530803.1| PREDICTED: cellulose synthase-like protein E...   129   2e-28
ref|XP_003600351.1| Cellulose synthase-like protein E1 [Medicago...   124   1e-26
ref|XP_003532180.1| PREDICTED: cellulose synthase-like protein E...   123   1e-26
gb|AFZ78594.1| cellulose synthase-like protein [Populus tomentosa]    122   3e-26
ref|XP_002300383.1| predicted protein [Populus trichocarpa] gi|2...   122   3e-26

>ref|XP_003530803.1| PREDICTED: cellulose synthase-like protein E1-like [Glycine max]
          Length = 934

 Score =  129 bits (324), Expect = 2e-28
 Identities = 59/99 (59%), Positives = 77/99 (77%), Gaps = 2/99 (2%)
 Frame = +1

Query: 1   QCFNNLTQNDIYGGALTVIQEMEFPGLDGFGGPLYIGTGCFHRRETLCGRKYSEEYKFEF 180
           QCF N+T ND+YGGAL VI E+EF GLDG GGP YIGTGCFHRRE LCGRK++++YK ++
Sbjct: 340 QCFENVTNNDLYGGALRVIYEVEFHGLDGLGGPFYIGTGCFHRREILCGRKFNDQYKNDW 399

Query: 181 --VKSIDNRVQESITELDVQTKILADCTSEKGTEWGKEM 291
              K+ID+  + S+ EL+ ++K LA CT E+ T WGK+M
Sbjct: 400 KEYKNIDHMKEGSLHELEEKSKALASCTYEENTLWGKKM 438


>ref|XP_003600351.1| Cellulose synthase-like protein E1 [Medicago truncatula]
           gi|355489399|gb|AES70602.1| Cellulose synthase-like
           protein E1 [Medicago truncatula]
          Length = 736

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/102 (57%), Positives = 78/102 (76%), Gaps = 5/102 (4%)
 Frame = +1

Query: 1   QCFNNLTQNDIYGGALTVIQEMEFPGLDGFGGPLYIGTGCFHRRETLCGRKYSEEYKFEF 180
           Q F N+T+NDIYGG+L V  E+EF GLDGFGGPLYIGTGCFHRR+ LCGRKYS++ K ++
Sbjct: 335 QGFENITKNDIYGGSLLVAYEVEFYGLDGFGGPLYIGTGCFHRRDVLCGRKYSDQCKIDW 394

Query: 181 V----KSIDNRVQ-ESITELDVQTKILADCTSEKGTEWGKEM 291
                ++ID+ ++  S+ EL+ ++K LA CT E+ T WGKEM
Sbjct: 395 KNVNDENIDHMIKVASLQELEEKSKTLASCTYEENTSWGKEM 436


>ref|XP_003532180.1| PREDICTED: cellulose synthase-like protein E1-like [Glycine max]
          Length = 736

 Score =  123 bits (309), Expect = 1e-26
 Identities = 54/97 (55%), Positives = 73/97 (75%)
 Frame = +1

Query: 1   QCFNNLTQNDIYGGALTVIQEMEFPGLDGFGGPLYIGTGCFHRRETLCGRKYSEEYKFEF 180
           Q F N T+ND+YGG+LT I E+EFPGLDG+GGPLY GTGCFH+RE+LCG K+S++Y  ++
Sbjct: 342 QTFENATKNDLYGGSLTSILEVEFPGLDGYGGPLYAGTGCFHKRESLCGMKFSDQYCNDW 401

Query: 181 VKSIDNRVQESITELDVQTKILADCTSEKGTEWGKEM 291
               D   + ++ EL+ Q+K+LA C  E+ T WGKEM
Sbjct: 402 NSEDDQFKEANLQELEQQSKVLASCNYEENTLWGKEM 438


>gb|AFZ78594.1| cellulose synthase-like protein [Populus tomentosa]
          Length = 736

 Score =  122 bits (306), Expect = 3e-26
 Identities = 54/96 (56%), Positives = 73/96 (76%)
 Frame = +1

Query: 1   QCFNNLTQNDIYGGALTVIQEMEFPGLDGFGGPLYIGTGCFHRRETLCGRKYSEEYKFEF 180
           Q F N+T+ND+Y  +L VI  +EF G DG+GGPLY+GTGCFHRR+TLCGR++S++ K E+
Sbjct: 342 QWFANVTKNDLYSSSLRVITNVEFHGTDGYGGPLYVGTGCFHRRDTLCGREFSQDSKIEW 401

Query: 181 VKSIDNRVQESITELDVQTKILADCTSEKGTEWGKE 288
            K  D+R Q+S+ EL  +TK LA CT E+ T+WG E
Sbjct: 402 KKHNDHRRQQSVHELVEETKTLASCTYEQNTKWGNE 437


>ref|XP_002300383.1| predicted protein [Populus trichocarpa] gi|222847641|gb|EEE85188.1|
           predicted protein [Populus trichocarpa]
          Length = 736

 Score =  122 bits (306), Expect = 3e-26
 Identities = 54/96 (56%), Positives = 73/96 (76%)
 Frame = +1

Query: 1   QCFNNLTQNDIYGGALTVIQEMEFPGLDGFGGPLYIGTGCFHRRETLCGRKYSEEYKFEF 180
           Q F N+T+ND+Y  +L VI  +EF G DG+GGPLY+GTGCFHRR+TLCGR++S++ K E+
Sbjct: 342 QWFANVTKNDLYSSSLRVITNVEFHGTDGYGGPLYVGTGCFHRRDTLCGREFSQDSKIEW 401

Query: 181 VKSIDNRVQESITELDVQTKILADCTSEKGTEWGKE 288
            K  D+R Q+S+ EL  +TK LA CT E+ T+WG E
Sbjct: 402 KKHNDHRRQQSVHELVEETKTLASCTYEQNTKWGNE 437


Top