BLASTX nr result

ID: Coptis24_contig00004911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004911
         (1472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269010.2| PREDICTED: hsp70 nucleotide exchange factor ...   394   e-107
emb|CBI29304.3| unnamed protein product [Vitis vinifera]              367   6e-99
ref|XP_002512713.1| sil1, putative [Ricinus communis] gi|2235486...   367   6e-99
ref|XP_002297899.1| predicted protein [Populus trichocarpa] gi|2...   362   1e-97
ref|XP_004140659.1| PREDICTED: nucleotide exchange factor SIL1-l...   360   5e-97

>ref|XP_002269010.2| PREDICTED: hsp70 nucleotide exchange factor FES1 [Vitis vinifera]
          Length = 395

 Score =  394 bits (1011), Expect = e-107
 Identities = 208/359 (57%), Positives = 260/359 (72%), Gaps = 14/359 (3%)
 Frame = +1

Query: 271  DSNNTGQMYWASAKEEGD--------------SPEDEFDGGFSSLESMLQWSIGHADPIK 408
            + +++G ++W++AKEEGD              +   + DGGFSSL+ MLQW+IGH+DP K
Sbjct: 29   NKSSSGGLFWSTAKEEGDLMRKSEAQESTVGVNDNADLDGGFSSLDGMLQWAIGHSDPTK 88

Query: 409  LKEAAEDAQCLSTSDLKKRQEEIKELMETLKTPSDAELMKTAIADLNNSSLSLEQHLRAX 588
            LKE A+D Q  S ++LKKRQ EIKELME LK PSDA+LM+ AIADLNNSSL +E H RA 
Sbjct: 89   LKETAQDVQRFSPNELKKRQMEIKELMEKLKMPSDAQLMQIAIADLNNSSLPMEDHHRAL 148

Query: 589  XXXXXXXXMIDNANDMNKFGGLAAVIRELNTSDQQMRIISAWILGMASQNNPVVQNQILD 768
                     IDNAND+NK GGL  VIREL+  D ++R  SAWILG ASQNNPVVQ Q+L+
Sbjct: 149  QELLILVEPIDNANDLNKLGGLTVVIRELDNPDPEIRKTSAWILGKASQNNPVVQKQVLE 208

Query: 769  LGALKKLIKMANSSSAEEATKALYAIAALIRNSIDGQTLFYAEAGELMLQDIMSSSSVDI 948
            LGAL KL+KM NSS  EEATKALYA++ALIRN++  Q LFYA+AG+LMLQDI+S+ S+DI
Sbjct: 209  LGALPKLMKMVNSSFVEEATKALYAVSALIRNNLAAQELFYAKAGDLMLQDILSNPSIDI 268

Query: 949  RLKKKAASLVADLANFQLESKNKAGXXXXXXXXXXXXVVDLTTFTDVDLQEKALVAIKNL 1128
            RL++K   LV DLA  QLES +KA             VVDLT  +D+DLQEKAL+A+KNL
Sbjct: 269  RLRRKTVFLVGDLAECQLESTHKAELPFFSNRHFLKSVVDLTASSDLDLQEKALIAVKNL 328

Query: 1129 LQLNASEALDFRDFCGFDKVLESMREQLRQLMTVEDQSDFLLDMESLLGDVELIFQKKL 1305
            LQL  +EAL F+D+C  D  LE MR+QL+QLM  E Q D+++D+ESL  +VELIF KKL
Sbjct: 329  LQLRTTEALVFKDYCDLDGALERMRKQLQQLMDEEYQRDYVMDLESLCREVELIFHKKL 387


>emb|CBI29304.3| unnamed protein product [Vitis vinifera]
          Length = 320

 Score =  367 bits (941), Expect = 6e-99
 Identities = 193/312 (61%), Positives = 234/312 (75%)
 Frame = +1

Query: 370  MLQWSIGHADPIKLKEAAEDAQCLSTSDLKKRQEEIKELMETLKTPSDAELMKTAIADLN 549
            MLQW+IGH+DP KLKE A+D Q  S ++LKKRQ EIKELME LK PSDA+LM+ AIADLN
Sbjct: 1    MLQWAIGHSDPTKLKETAQDVQRFSPNELKKRQMEIKELMEKLKMPSDAQLMQIAIADLN 60

Query: 550  NSSLSLEQHLRAXXXXXXXXXMIDNANDMNKFGGLAAVIRELNTSDQQMRIISAWILGMA 729
            NSSL +E H RA          IDNAND+NK GGL  VIREL+  D ++R  SAWILG A
Sbjct: 61   NSSLPMEDHHRALQELLILVEPIDNANDLNKLGGLTVVIRELDNPDPEIRKTSAWILGKA 120

Query: 730  SQNNPVVQNQILDLGALKKLIKMANSSSAEEATKALYAIAALIRNSIDGQTLFYAEAGEL 909
            SQNNPVVQ Q+L+LGAL KL+KM NSS  EEATKALYA++ALIRN++  Q LFYA+AG+L
Sbjct: 121  SQNNPVVQKQVLELGALPKLMKMVNSSFVEEATKALYAVSALIRNNLAAQELFYAKAGDL 180

Query: 910  MLQDIMSSSSVDIRLKKKAASLVADLANFQLESKNKAGXXXXXXXXXXXXVVDLTTFTDV 1089
            MLQDI+S+ S+DIRL++K   LV DLA  QLES +KA             VVDLT  +D+
Sbjct: 181  MLQDILSNPSIDIRLRRKTVFLVGDLAECQLESTHKAELPFFSNRHFLKSVVDLTASSDL 240

Query: 1090 DLQEKALVAIKNLLQLNASEALDFRDFCGFDKVLESMREQLRQLMTVEDQSDFLLDMESL 1269
            DLQEKAL+A+KNLLQL  +EAL F+D+C  D  LE MR+QL+QLM  E Q D+++D+ESL
Sbjct: 241  DLQEKALIAVKNLLQLRTTEALVFKDYCDLDGALERMRKQLQQLMDEEYQRDYVMDLESL 300

Query: 1270 LGDVELIFQKKL 1305
              +VELIF KKL
Sbjct: 301  CREVELIFHKKL 312


>ref|XP_002512713.1| sil1, putative [Ricinus communis] gi|223548674|gb|EEF50165.1| sil1,
            putative [Ricinus communis]
          Length = 395

 Score =  367 bits (941), Expect = 6e-99
 Identities = 198/366 (54%), Positives = 247/366 (67%), Gaps = 17/366 (4%)
 Frame = +1

Query: 259  ESVNDSNNTGQMYWASAKEEGD-----------------SPEDEFDGGFSSLESMLQWSI 387
            E +N S+++  ++W++ KEE D                 +  D  DGGFSSL+ MLQW++
Sbjct: 22   ERLNKSSSSSGVFWSTVKEESDLLRKAEPDEDPSAAAVVNDHDHLDGGFSSLDGMLQWAV 81

Query: 388  GHADPIKLKEAAEDAQCLSTSDLKKRQEEIKELMETLKTPSDAELMKTAIADLNNSSLSL 567
            GH+DP KLKE A+D + LS +DLK RQ EIKELM+ LK PSDA LM+ AI DL+NSSL L
Sbjct: 82   GHSDPEKLKETAQDVRRLSPTDLKNRQLEIKELMDELKMPSDAHLMQNAINDLSNSSLPL 141

Query: 568  EQHLRAXXXXXXXXXMIDNANDMNKFGGLAAVIRELNTSDQQMRIISAWILGMASQNNPV 747
            E H RA          IDNAND++K GGL  +IRELN  D  +R ISAW+LG ASQNNP 
Sbjct: 142  EDHHRALQELLILVEPIDNANDLSKLGGLGVLIRELNHPDSNIRRISAWVLGKASQNNPF 201

Query: 748  VQNQILDLGALKKLIKMANSSSAEEATKALYAIAALIRNSIDGQTLFYAEAGELMLQDIM 927
            VQ Q+L++GAL KL++M  S+ AEE  KALYA++ALIRN++ GQ LFYAEAG+ MLQ+I+
Sbjct: 202  VQKQVLEMGALNKLMQMVKSNCAEEGIKALYAVSALIRNNLAGQELFYAEAGDQMLQEIL 261

Query: 928  SSSSVDIRLKKKAASLVADLANFQLESKNKAGXXXXXXXXXXXXVVDLTTFTDVDLQEKA 1107
              SS DIRL++KA  LVADLA  QLE+  +A             VVDL + TD+DLQEKA
Sbjct: 262  GDSSTDIRLRRKAVFLVADLAECQLENVGRAELPFFSNRFFLKSVVDLVSSTDLDLQEKA 321

Query: 1108 LVAIKNLLQLNASEALDFRDFCGFDKVLESMREQLRQLMTVEDQSDFLLDMESLLGDVEL 1287
            LVA+KNLLQL   EA   +DFCG D  LE MR+QL  LMT E   D+  D+ESL  +VEL
Sbjct: 322  LVAVKNLLQLKTIEASVIKDFCGLDGALERMRQQLHVLMTQETYRDYATDIESLRREVEL 381

Query: 1288 IFQKKL 1305
            IF  KL
Sbjct: 382  IFYSKL 387


>ref|XP_002297899.1| predicted protein [Populus trichocarpa] gi|222845157|gb|EEE82704.1|
            predicted protein [Populus trichocarpa]
          Length = 400

 Score =  362 bits (930), Expect = 1e-97
 Identities = 201/368 (54%), Positives = 248/368 (67%), Gaps = 19/368 (5%)
 Frame = +1

Query: 259  ESVNDSNNTGQMYWASAKEEGD-----SPE--------------DEFDGGFSSLESMLQW 381
            E V++++ T  + W++ K+E D      PE              D+ DGGFSSLE ML W
Sbjct: 25   ELVDETSATAGLLWSTGKDEPDLLSKAEPENSDDSSAAAVVNDHDDLDGGFSSLEGMLHW 84

Query: 382  SIGHADPIKLKEAAEDAQCLSTSDLKKRQEEIKELMETLKTPSDAELMKTAIADLNNSSL 561
            +IGH+DP KLKE AED Q LS S+L+KRQ E+KELME +K PSDAELM  AI DLNNSS 
Sbjct: 85   AIGHSDPTKLKENAEDVQRLSASELQKRQIELKELMEKMKMPSDAELMHMAIDDLNNSSS 144

Query: 562  SLEQHLRAXXXXXXXXXMIDNANDMNKFGGLAAVIRELNTSDQQMRIISAWILGMASQNN 741
            SLE   RA          +DNAND+NK GGLA VI+EL+  D  +R +SAW+LG A QNN
Sbjct: 145  SLEDRQRALQELLILVEPLDNANDLNKLGGLAIVIQELDHPDHDIRRLSAWVLGKACQNN 204

Query: 742  PVVQNQILDLGALKKLIKMANSSSAEEATKALYAIAALIRNSIDGQTLFYAEAGELMLQD 921
              VQ QIL+LGAL KLIKM  SSS EEA KALYA++ LI+N + GQ  FYAE G+ MLQ+
Sbjct: 205  AAVQKQILELGALSKLIKMVKSSSIEEAIKALYAVSTLIQNHLAGQEFFYAEDGDAMLQE 264

Query: 922  IMSSSSVDIRLKKKAASLVADLANFQLESKNKAGXXXXXXXXXXXXVVDLTTFTDVDLQE 1101
            I+S+SS DIRL +KA S+VADLA +QLE+  +A             VVDLT  TD+DLQE
Sbjct: 265  ILSNSSNDIRLLRKAVSVVADLAEYQLENIIRAESPCFRNRFFLKSVVDLTASTDLDLQE 324

Query: 1102 KALVAIKNLLQLNASEALDFRDFCGFDKVLESMREQLRQLMTVEDQSDFLLDMESLLGDV 1281
            KALVA+KNLLQL  ++AL  +D C  D  LE MR QL  LM  ED  D+ +D+E+L G+V
Sbjct: 325  KALVAVKNLLQLKTTDALVLKDLCNLDGSLERMRRQLLDLMAEEDHRDYAVDLETLRGEV 384

Query: 1282 ELIFQKKL 1305
            ELIF +KL
Sbjct: 385  ELIFHEKL 392


>ref|XP_004140659.1| PREDICTED: nucleotide exchange factor SIL1-like [Cucumis sativus]
          Length = 395

 Score =  360 bits (924), Expect = 5e-97
 Identities = 197/369 (53%), Positives = 252/369 (68%), Gaps = 20/369 (5%)
 Frame = +1

Query: 268  NDSNNTGQMYWASAKEEGD--------------------SPEDEFDGGFSSLESMLQWSI 387
            NDS+  G + W+SAK+EGD                       D FDGGFSSL+SMLQW+I
Sbjct: 23   NDSSLEG-LIWSSAKQEGDLLIDHRPQEDSSAAAAASVVHDADGFDGGFSSLDSMLQWAI 81

Query: 388  GHADPIKLKEAAEDAQCLSTSDLKKRQEEIKELMETLKTPSDAELMKTAIADLNNSSLSL 567
            GH+DP KLK+ A+D + LS +++KKRQEEIK+L+E LK PSDA+LM+ A+ DL NSSLSL
Sbjct: 82   GHSDPAKLKDTAQDVKRLSPNEIKKRQEEIKDLIEELKLPSDAKLMQIAVDDLKNSSLSL 141

Query: 568  EQHLRAXXXXXXXXXMIDNANDMNKFGGLAAVIRELNTSDQQMRIISAWILGMASQNNPV 747
            E   RA          IDNAND++K GGLA + RELN  D  +R I+AWILG ASQNNP+
Sbjct: 142  EDRHRALQELLVLVEPIDNANDLDKLGGLAVLTRELNHVDPDVRKIAAWILGKASQNNPI 201

Query: 748  VQNQILDLGALKKLIKMANSSSAEEATKALYAIAALIRNSIDGQTLFYAEAGELMLQDIM 927
            VQ Q+L+LGAL KL+ MA S   EEA KALYAI++L++N++ GQ LFYAEAGE+MLQDI+
Sbjct: 202  VQKQVLELGALAKLVSMAKSDFVEEAIKALYAISSLVQNNLSGQELFYAEAGEIMLQDIL 261

Query: 928  SSSSVDIRLKKKAASLVADLANFQLESKNKAGXXXXXXXXXXXXVVDLTTFTDVDLQEKA 1107
            S+SS+DIRL+KKA  LV+DLA  QLE  ++A             VV+L   TD+DLQEKA
Sbjct: 262  SNSSMDIRLQKKAVFLVSDLAVTQLEKPDEAERPFFGDRLFLKSVVNLIHSTDIDLQEKA 321

Query: 1108 LVAIKNLLQLNASEALDFRDFCGFDKVLESMREQLRQLMTVEDQSDFLLDMESLLGDVEL 1287
            L+A+KNLL L  ++A   ++FCG D  LE MR +L+ LM  ED  D+ +D+E L   VEL
Sbjct: 322  LIALKNLLLLRTTKAQVLKEFCGLDAALERMRMKLKVLMEEEDHRDYAMDVEDLRSQVEL 381

Query: 1288 IFQKKLESR 1314
             F +KL  R
Sbjct: 382  TFLEKLGKR 390


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