BLASTX nr result

ID: Coptis24_contig00004908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004908
         (708 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266637.2| PREDICTED: uncharacterized protein LOC100249...   276   4e-72
ref|XP_002303532.1| predicted protein [Populus trichocarpa] gi|2...   271   9e-71
ref|XP_002329892.1| predicted protein [Populus trichocarpa] gi|2...   265   7e-69
ref|XP_002509612.1| conserved hypothetical protein [Ricinus comm...   264   1e-68
ref|XP_002273878.1| PREDICTED: uncharacterized protein LOC100245...   261   7e-68

>ref|XP_002266637.2| PREDICTED: uncharacterized protein LOC100249883 [Vitis vinifera]
           gi|296082847|emb|CBI22148.3| unnamed protein product
           [Vitis vinifera]
          Length = 215

 Score =  276 bits (705), Expect = 4e-72
 Identities = 134/216 (62%), Positives = 169/216 (78%)
 Frame = -2

Query: 677 MKLVWCPETASKAYIDTVKYCEVFEESSVAELISAMAGGWKPQLIVETWYHGGAVTTSVG 498
           MKLVW PETASKAYIDTVK CE+F+ES VAEL+SAMA GW  QLIVETW  GG + TSVG
Sbjct: 1   MKLVWSPETASKAYIDTVKTCELFQESGVAELVSAMAAGWNAQLIVETWSQGGLIATSVG 60

Query: 497 LAVASRHTCGRHVCVVPDEQTRLDYTEAMRNACDMSPXXXXXXXXXVMGDLVGIDFLVVD 318
           LA+ASR++CGRHVC+VPDEQ+R +Y EAM  A  +S          VMG L G+DFLVVD
Sbjct: 61  LAIASRNSCGRHVCLVPDEQSRSEYVEAMGEA-GVSTEVIVGKAEDVMGGLSGVDFLVVD 119

Query: 317 CRLKDFARILSIAKLSHRGAVLVCKNSSPRTYSTFRWRTVMGSRSRIVRSAYLPVGKGLE 138
           CR ++F R+  +AKLSHRGAVLVCKN++  + ++F+WR+V+   SR+VR+ +LPVGKGL+
Sbjct: 120 CRRRNFQRVFRLAKLSHRGAVLVCKNANSTSNTSFKWRSVLDHGSRLVRTVFLPVGKGLD 179

Query: 137 IAYVATSGGSLSPGKATSRWVRHIDQLSGEEHVYRR 30
           IA+VATSGGS    +  SRW+RH+D+ SGEE+V R+
Sbjct: 180 IAHVATSGGSSGSTQGQSRWIRHVDRESGEEYVIRK 215


>ref|XP_002303532.1| predicted protein [Populus trichocarpa] gi|222840964|gb|EEE78511.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score =  271 bits (693), Expect = 9e-71
 Identities = 144/219 (65%), Positives = 170/219 (77%), Gaps = 3/219 (1%)
 Frame = -2

Query: 677 MKLVWCPETASKAYIDTVKYCEVFEESSVAELISAMAGGWKPQLIVETWYHGGAVTTSVG 498
           MKLVW PETA KAYIDTVK CEVF+ESSVAELISAMA GW  +LIVETW  GG + TS+G
Sbjct: 1   MKLVWSPETALKAYIDTVKSCEVFQESSVAELISAMAAGWNAKLIVETWSQGGILATSIG 60

Query: 497 LAVASRHTCGRHVCVVPDEQTRLDYTEAMRNACDMSPXXXXXXXXXVMGDLVGIDFLVVD 318
           LA+ASRHT GRHVCVVPDE +R +Y EAM  A  MSP         V+  L GIDFLVVD
Sbjct: 61  LAIASRHTDGRHVCVVPDELSRSEYEEAMAEA-GMSPEIIVGEAEEVVEGLSGIDFLVVD 119

Query: 317 CRLKDFARILSIAKLSHRGAVLVCKNSSPRTYSTFRWRTVM--GSRSRIVRSAYLPVGKG 144
            R +D+AR+L + KLS RGAVLVCKN+S R  S+F+WR V+  GSR R+VRS +LPVGKG
Sbjct: 120 SRQRDYARVLRLTKLSSRGAVLVCKNASSRNGSSFKWRNVVDDGSR-RLVRSVFLPVGKG 178

Query: 143 LEIAYVATSGGSLS-PGKATSRWVRHIDQLSGEEHVYRR 30
           L+IA+VATSGGS S PGK  SRW++H+D+ SGEE+V R+
Sbjct: 179 LDIAHVATSGGSSSNPGKDESRWIKHVDRQSGEEYVIRK 217


>ref|XP_002329892.1| predicted protein [Populus trichocarpa] gi|222871129|gb|EEF08260.1|
           predicted protein [Populus trichocarpa]
          Length = 217

 Score =  265 bits (677), Expect = 7e-69
 Identities = 141/219 (64%), Positives = 169/219 (77%), Gaps = 3/219 (1%)
 Frame = -2

Query: 677 MKLVWCPETASKAYIDTVKYCEVFEESSVAELISAMAGGWKPQLIVETWYHGGAVTTSVG 498
           MKLVW PETASKAYIDTVK CEV +ESSVAELISAMA GW  +LI+ETW  GG + TS+G
Sbjct: 1   MKLVWSPETASKAYIDTVKSCEVHQESSVAELISAMAAGWNAKLILETWSQGGILATSIG 60

Query: 497 LAVASRHTCGRHVCVVPDEQTRLDYTEAMRNACDMSPXXXXXXXXXVMGDLVGIDFLVVD 318
           LA+ASR T GRHVC+VPDE +R  Y EA+  A  +SP         VM  LVGIDF+VVD
Sbjct: 61  LAIASRRTDGRHVCIVPDELSRSQYEEAVGEA-GISPEIIIGEAEEVMEGLVGIDFMVVD 119

Query: 317 CRLKDFARILSIAKLSHRGAVLVCKNSSPRTYSTFRWRTVM--GSRSRIVRSAYLPVGKG 144
            R +DFA +L +AKLS RGAVLVCKN+S R  S+FRWR+V+  GSR R+VRS +LPVGKG
Sbjct: 120 SRQRDFAGVLRVAKLSSRGAVLVCKNASSRNESSFRWRSVVDDGSR-RLVRSVFLPVGKG 178

Query: 143 LEIAYVATSGGSLS-PGKATSRWVRHIDQLSGEEHVYRR 30
           L+IA+VATSGGS S  GK  SRW++H+D+ SGEE+V R+
Sbjct: 179 LDIAHVATSGGSSSNSGKGESRWIKHVDRQSGEEYVIRK 217


>ref|XP_002509612.1| conserved hypothetical protein [Ricinus communis]
           gi|223549511|gb|EEF50999.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 215

 Score =  264 bits (675), Expect = 1e-68
 Identities = 135/217 (62%), Positives = 163/217 (75%), Gaps = 1/217 (0%)
 Frame = -2

Query: 677 MKLVWCPETASKAYIDTVKYCEVFEESSVAELISAMAGGWKPQLIVETWYHGGAVTTSVG 498
           MKLVW PE A KAYI+TVK CE+F+ESSVAEL+SAMA GWK  LIVETW HGG + TS+G
Sbjct: 1   MKLVWSPEPALKAYIETVKSCEIFQESSVAELLSAMAAGWKANLIVETWSHGGVIATSIG 60

Query: 497 LAVASRHTCGRHVCVVPDEQTRLDYTEAMRNACDMSPXXXXXXXXXVMGDLVGIDFLVVD 318
           LA+ASRH  GRHVC+VPDE++R DY + M  A  M P         V   L GIDFLVVD
Sbjct: 61  LAIASRHAGGRHVCIVPDERSRTDYAKVMGEA-GMLPEIIVGEPEEVTERLDGIDFLVVD 119

Query: 317 CRLKDFARILSIAKLSHRGAVLVCKNSSPRTYSTFRWRTVMGSRS-RIVRSAYLPVGKGL 141
            R KDFAR+L +AKLS RGAVL+CKN++ +T S+FRWR V+   S R+VRS +LPVGKGL
Sbjct: 120 SRQKDFARVLRLAKLSSRGAVLMCKNANSKT-SSFRWRGVLEEGSCRLVRSVFLPVGKGL 178

Query: 140 EIAYVATSGGSLSPGKATSRWVRHIDQLSGEEHVYRR 30
           +IA+VA SGG+  P K   RW++HID+ SGEEHV R+
Sbjct: 179 DIAHVAVSGGNSGPNKTEKRWIKHIDKQSGEEHVIRK 215


>ref|XP_002273878.1| PREDICTED: uncharacterized protein LOC100245353 [Vitis vinifera]
           gi|296089168|emb|CBI38871.3| unnamed protein product
           [Vitis vinifera]
          Length = 216

 Score =  261 bits (668), Expect = 7e-68
 Identities = 126/215 (58%), Positives = 159/215 (73%)
 Frame = -2

Query: 677 MKLVWCPETASKAYIDTVKYCEVFEESSVAELISAMAGGWKPQLIVETWYHGGAVTTSVG 498
           MKLVW PE ASKAYIDTVK  EVF++S VAELI+AMAGGW  ++IVETW HGG VTTS G
Sbjct: 1   MKLVWSPEIASKAYIDTVKSSEVFKQSGVAELIAAMAGGWNAKMIVETWSHGGVVTTSAG 60

Query: 497 LAVASRHTCGRHVCVVPDEQTRLDYTEAMRNACDMSPXXXXXXXXXVMGDLVGIDFLVVD 318
           LA+A+ HTCGRHVC+VPDE+++L Y +AM +A   SP             L+ +DFLVVD
Sbjct: 61  LAIAASHTCGRHVCIVPDERSKLAYIKAMHDAGVTSPEVIVGEAEDAAATLLEVDFLVVD 120

Query: 317 CRLKDFARILSIAKLSHRGAVLVCKNSSPRTYSTFRWRTVMGSRSRIVRSAYLPVGKGLE 138
           CR +DF ++L  AK+S RGAVLV KN + R+ S F+W  V+   +R+VR+ YLPVGKGL+
Sbjct: 121 CRRRDFGKVLMFAKISQRGAVLVRKNVNQRSVSGFKWHGVLHRGTRVVRTVYLPVGKGLD 180

Query: 137 IAYVATSGGSLSPGKATSRWVRHIDQLSGEEHVYR 33
           IA++ +SGG  S  K  SRW+RHID+ SGEEH+ R
Sbjct: 181 IAHIGSSGGVASSRKGPSRWIRHIDEKSGEEHLIR 215


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