BLASTX nr result

ID: Coptis24_contig00004903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004903
         (1172 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262755.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reduc...   474   e-131
ref|XP_002513357.1| 2,4-dienoyl-CoA reductase, putative [Ricinus...   469   e-130
ref|XP_002884927.1| short-chain dehydrogenase/reductase family p...   467   e-129
ref|NP_001239792.1| uncharacterized protein LOC100793630 [Glycin...   467   e-129
ref|XP_002275982.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reduc...   466   e-129

>ref|XP_002262755.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera]
           gi|297736138|emb|CBI24176.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score =  474 bits (1220), Expect = e-131
 Identities = 232/295 (78%), Positives = 261/295 (88%)
 Frame = +1

Query: 97  SPFKDDILKGKVALITGGGSGIGFEISTQLGKHGAFVAIMGRRRNVLDSAVSQLRAQGIK 276
           SPFK D+LKGKVAL+TGGGSGIGFEISTQ G HGA +AIMGRR+ VLDSAVS L +QGI 
Sbjct: 3   SPFKADVLKGKVALLTGGGSGIGFEISTQFGLHGASIAIMGRRKQVLDSAVSGLCSQGIP 62

Query: 277 AIGLEGDVRKNEDATRVVEMTVKHFGKLDILVNGAAGNFLVPAEDLSPNGFRTVLDIDSV 456
           A+G  GDVRK EDA RVVE TVKHFG+LDILVN AAGNFLV +EDLSPNGFRTV+DIDSV
Sbjct: 63  AVGFVGDVRKQEDAKRVVESTVKHFGRLDILVNAAAGNFLVSSEDLSPNGFRTVMDIDSV 122

Query: 457 GTFTMCHESLKYLKKGGPGRDSAVGGTILNISATLHYTASWYQIHVSAAKAAVDSLTRSL 636
           GTFTMCHE+LKYLKKGGPGR  + GG+ILNISATLHYTA+WYQIHVSAAKAAVD+ TR+L
Sbjct: 123 GTFTMCHEALKYLKKGGPGRSFSSGGSILNISATLHYTAAWYQIHVSAAKAAVDATTRNL 182

Query: 637 ALEWGTDYDIRVNGIAPGPIEGTPGMSKLGPDEAKSKIGDMLPLYKLGERWDIAMAAVYL 816
           ALEWGTDYDIRVNGIAPGPI  T GMSKL P+E  +K  +++PLYKLGE+WDIAMAA+YL
Sbjct: 183 ALEWGTDYDIRVNGIAPGPIGDTAGMSKLAPEEISNKAREIMPLYKLGEKWDIAMAALYL 242

Query: 817 ASDAGKYVNGTTLVVDNGLWLSRPRHIQKKVVQEISRAVERRSREAPVGTPTSKL 981
           ASDAGKY+NGTTLVVD GLWLSRPRH+ K+ V+++SRAVE+RSR  PVG P SKL
Sbjct: 243 ASDAGKYINGTTLVVDGGLWLSRPRHLPKEAVKQLSRAVEKRSRGVPVGVPKSKL 297


>ref|XP_002513357.1| 2,4-dienoyl-CoA reductase, putative [Ricinus communis]
           gi|223547265|gb|EEF48760.1| 2,4-dienoyl-CoA reductase,
           putative [Ricinus communis]
          Length = 297

 Score =  469 bits (1208), Expect = e-130
 Identities = 231/295 (78%), Positives = 258/295 (87%)
 Frame = +1

Query: 97  SPFKDDILKGKVALITGGGSGIGFEISTQLGKHGAFVAIMGRRRNVLDSAVSQLRAQGIK 276
           SPFK DILKGKVALITGGGSGIGFEISTQ GKHGA VAIMGRR+ VLDSAVS L +  I 
Sbjct: 3   SPFKRDILKGKVALITGGGSGIGFEISTQFGKHGASVAIMGRRKQVLDSAVSHLNSLQIP 62

Query: 277 AIGLEGDVRKNEDATRVVEMTVKHFGKLDILVNGAAGNFLVPAEDLSPNGFRTVLDIDSV 456
           ++G  GDVRK EDA RV+E T KHFG++DILVN AAGNFLV  EDLSPNGFRTV+DID+V
Sbjct: 63  SVGFVGDVRKQEDAKRVLESTFKHFGRIDILVNAAAGNFLVSPEDLSPNGFRTVMDIDAV 122

Query: 457 GTFTMCHESLKYLKKGGPGRDSAVGGTILNISATLHYTASWYQIHVSAAKAAVDSLTRSL 636
           GTFTMCHESLKYLK GG GR S+ GGTILNISATLHYTA+WYQIHVSAAKAAVD++ R+L
Sbjct: 123 GTFTMCHESLKYLKIGGLGRSSSGGGTILNISATLHYTAAWYQIHVSAAKAAVDAIARNL 182

Query: 637 ALEWGTDYDIRVNGIAPGPIEGTPGMSKLGPDEAKSKIGDMLPLYKLGERWDIAMAAVYL 816
           ALEWGTDYDIRVNGIAPGPI  TPGMSKL PD+  SK  D +PLYKLGE+WDIAMAA+YL
Sbjct: 183 ALEWGTDYDIRVNGIAPGPIGDTPGMSKLAPDDINSKARDYMPLYKLGEKWDIAMAALYL 242

Query: 817 ASDAGKYVNGTTLVVDNGLWLSRPRHIQKKVVQEISRAVERRSREAPVGTPTSKL 981
           ASDAGK+VNGTT+VVD GLWLSRPRH+ K  V+++SR VE+RSR+APVG P+SKL
Sbjct: 243 ASDAGKFVNGTTIVVDGGLWLSRPRHLPKDAVKQLSRTVEKRSRDAPVGVPSSKL 297


>ref|XP_002884927.1| short-chain dehydrogenase/reductase family protein [Arabidopsis
           lyrata subsp. lyrata] gi|297330767|gb|EFH61186.1|
           short-chain dehydrogenase/reductase family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 298

 Score =  467 bits (1201), Expect = e-129
 Identities = 227/296 (76%), Positives = 263/296 (88%), Gaps = 1/296 (0%)
 Frame = +1

Query: 97  SPFKDDILKGKVALITGGGSGIGFEISTQLGKHGAFVAIMGRRRNVLDSAVSQLRAQGIK 276
           SPFK D+++G+VALITGGGSGIGFEIS+Q GKHGA +AIMGRR+ VLD AVS LR+ GI+
Sbjct: 3   SPFKPDVVRGQVALITGGGSGIGFEISSQFGKHGASIAIMGRRKQVLDDAVSALRSLGIQ 62

Query: 277 AIGLEGDVRKNEDATRVVEMTVKHFGKLDILVNGAAGNFLVPAEDLSPNGFRTVLDIDSV 456
           AIGLEGDVRK EDA RVVE T +HFG++DILVN AAGNFL  AEDLSPNGFRTVLDID+V
Sbjct: 63  AIGLEGDVRKQEDARRVVEATYQHFGRIDILVNAAAGNFLAAAEDLSPNGFRTVLDIDAV 122

Query: 457 GTFTMCHESLKYLKKGGPGRDSAVGG-TILNISATLHYTASWYQIHVSAAKAAVDSLTRS 633
           GTF MCH +LKYLKKGGPGRDS+ GG +I+NISATLHYTASWYQIHVSAAKAAVD+ TR+
Sbjct: 123 GTFNMCHAALKYLKKGGPGRDSSTGGGSIINISATLHYTASWYQIHVSAAKAAVDATTRN 182

Query: 634 LALEWGTDYDIRVNGIAPGPIEGTPGMSKLGPDEAKSKIGDMLPLYKLGERWDIAMAAVY 813
           LALEWGTDYDIRVNGIAPGPI GTPGMSKL P+E ++K  + +PLYKLGE+WDIAMAA+Y
Sbjct: 183 LALEWGTDYDIRVNGIAPGPIGGTPGMSKLVPEEIENKTREYMPLYKLGEKWDIAMAALY 242

Query: 814 LASDAGKYVNGTTLVVDNGLWLSRPRHIQKKVVQEISRAVERRSREAPVGTPTSKL 981
           L+ D+GKYVNG T+VVD GLWLS+PRH+ K+ V+++SRAVE+RSR  PVG PTSKL
Sbjct: 243 LSCDSGKYVNGLTVVVDGGLWLSKPRHLPKEAVKQLSRAVEKRSRAKPVGLPTSKL 298


>ref|NP_001239792.1| uncharacterized protein LOC100793630 [Glycine max]
           gi|255647355|gb|ACU24144.1| unknown [Glycine max]
          Length = 298

 Score =  467 bits (1201), Expect = e-129
 Identities = 230/296 (77%), Positives = 260/296 (87%), Gaps = 1/296 (0%)
 Frame = +1

Query: 97  SPFKDDILKGKVALITGGGSGIGFEISTQLGKHGAFVAIMGRRRNVLDSAVSQLRAQGIK 276
           SPFK +ILKGKVALITGG SGIGFEISTQ GKHGA VA+MGRR+ VL SAVS L++  I 
Sbjct: 3   SPFKPEILKGKVALITGGASGIGFEISTQFGKHGASVALMGRRKQVLQSAVSVLQSLVIP 62

Query: 277 AIGLEGDVRKNEDATRVVEMTVKHFGKLDILVNGAAGNFLVPAEDLSPNGFRTVLDIDSV 456
           A+G EGDVRK EDA RVVE T KHFG++DILVN AAGNFLV AEDLS NGFRTVLDIDSV
Sbjct: 63  AVGFEGDVRKQEDAARVVESTFKHFGRIDILVNAAAGNFLVSAEDLSSNGFRTVLDIDSV 122

Query: 457 GTFTMCHESLKYLKKGGPGR-DSAVGGTILNISATLHYTASWYQIHVSAAKAAVDSLTRS 633
           GTFTMCHE+LKYLKKGG GR +S+ GG+I+NISATLHYTASWYQIHVSAAKAAVD+ TR+
Sbjct: 123 GTFTMCHEALKYLKKGGEGRSNSSSGGSIINISATLHYTASWYQIHVSAAKAAVDATTRN 182

Query: 634 LALEWGTDYDIRVNGIAPGPIEGTPGMSKLGPDEAKSKIGDMLPLYKLGERWDIAMAAVY 813
           LALEWGTDYDIRVNGIAPGPI GTPGMSKL PDE  SK  D +PLYKLGE+WDIAMAA++
Sbjct: 183 LALEWGTDYDIRVNGIAPGPISGTPGMSKLAPDEISSKARDYMPLYKLGEKWDIAMAALF 242

Query: 814 LASDAGKYVNGTTLVVDNGLWLSRPRHIQKKVVQEISRAVERRSREAPVGTPTSKL 981
           LASDAGK+VNG T++VD GLWLSRPRH++K+ V+++SR+VE+RSR  PVG P SKL
Sbjct: 243 LASDAGKFVNGDTMIVDGGLWLSRPRHLEKEAVKQVSRSVEKRSRNVPVGVPKSKL 298


>ref|XP_002275982.1| PREDICTED: peroxisomal 2,4-dienoyl-CoA reductase [Vitis vinifera]
           gi|147772171|emb|CAN73418.1| hypothetical protein
           VITISV_019955 [Vitis vinifera]
           gi|297737992|emb|CBI27193.3| unnamed protein product
           [Vitis vinifera]
          Length = 297

 Score =  466 bits (1200), Expect = e-129
 Identities = 226/295 (76%), Positives = 260/295 (88%)
 Frame = +1

Query: 97  SPFKDDILKGKVALITGGGSGIGFEISTQLGKHGAFVAIMGRRRNVLDSAVSQLRAQGIK 276
           SPF+ DILKGKVAL+TGGGSGIG+EIS QLGKHGA +AIMGRRR VLD+AVS L + GI 
Sbjct: 3   SPFRGDILKGKVALLTGGGSGIGYEISRQLGKHGASIAIMGRRRQVLDAAVSSLHSLGIP 62

Query: 277 AIGLEGDVRKNEDATRVVEMTVKHFGKLDILVNGAAGNFLVPAEDLSPNGFRTVLDIDSV 456
           AIGLEGDVRK EDA RV+E T+KHFG+LDILVN AAGNFLVPAEDLSP GF+TV+DIDSV
Sbjct: 63  AIGLEGDVRKQEDAVRVLESTIKHFGRLDILVNAAAGNFLVPAEDLSPKGFQTVIDIDSV 122

Query: 457 GTFTMCHESLKYLKKGGPGRDSAVGGTILNISATLHYTASWYQIHVSAAKAAVDSLTRSL 636
           GTFTMCHE+L+YLKKGGPG+  + GG I+NISATLHYTA+WYQIHVSAAKAAVDS+TRSL
Sbjct: 123 GTFTMCHEALQYLKKGGPGKSPSTGGIIINISATLHYTATWYQIHVSAAKAAVDSITRSL 182

Query: 637 ALEWGTDYDIRVNGIAPGPIEGTPGMSKLGPDEAKSKIGDMLPLYKLGERWDIAMAAVYL 816
           ALEWGTDYDIRVNGIAPGPI+ T G+SKL P++   K  +  PL+KLGE+WDIAMAAVYL
Sbjct: 183 ALEWGTDYDIRVNGIAPGPIDDTAGLSKLAPEDVVRKAKEHEPLFKLGEKWDIAMAAVYL 242

Query: 817 ASDAGKYVNGTTLVVDNGLWLSRPRHIQKKVVQEISRAVERRSREAPVGTPTSKL 981
           AS+AGKY+NGTTL VD GLWLS+PRH+ K+ V+++SRAVERRSR+  VG P SKL
Sbjct: 243 ASNAGKYINGTTLTVDGGLWLSKPRHLSKEAVKQLSRAVERRSRKILVGVPKSKL 297


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