BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004900
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_177135.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabid...    62   3e-08
dbj|BAF01425.1| putative chromomethylase [Arabidopsis thaliana]        62   3e-08
gb|AAK71870.1| chromomethylase 3 [Arabidopsis thaliana]                62   3e-08
gb|AAK69756.1|AF383170_1 chromomethylase CMT3 [Arabidopsis thali...    62   3e-08
emb|CAQ18903.1| chromomethylase [Nicotiana sylvestris] gi|169977...    59   3e-07

>ref|NP_177135.1| DNA (cytosine-5)-methyltransferase CMT3 [Arabidopsis thaliana]
           gi|110832800|sp|Q94F88.2|CMT3_ARATH RecName: Full=DNA
           (cytosine-5)-methyltransferase CMT3; AltName:
           Full=Chromomethylase 3; AltName: Full=Protein
           CHROMOMETHYLASE 3 gi|12325192|gb|AAG52543.1|AC013289_10
           putative chromomethylase; 17383-22406 [Arabidopsis
           thaliana] gi|332196852|gb|AEE34973.1| DNA
           (cytosine-5)-methyltransferase CMT3 [Arabidopsis
           thaliana]
          Length = 839

 Score = 61.6 bits (148), Expect(2) = 3e-08
 Identities = 24/30 (80%), Positives = 27/30 (90%)
 Frame = -3

Query: 92  CRPFRRLWWDVIVPIVVTRAEPHNQIILHP 3
           C+PF RLWWD IVP VVTRAEPHNQ+I+HP
Sbjct: 727 CKPFGRLWWDEIVPTVVTRAEPHNQVIIHP 756



 Score = 21.6 bits (44), Expect(2) = 3e-08
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 216 VPDYAVTFKDVFSKECR 166
           VPDYA+T+ D   K C+
Sbjct: 714 VPDYALTYVD--GKSCK 728


>dbj|BAF01425.1| putative chromomethylase [Arabidopsis thaliana]
          Length = 839

 Score = 61.6 bits (148), Expect(2) = 3e-08
 Identities = 24/30 (80%), Positives = 27/30 (90%)
 Frame = -3

Query: 92  CRPFRRLWWDVIVPIVVTRAEPHNQIILHP 3
           C+PF RLWWD IVP VVTRAEPHNQ+I+HP
Sbjct: 727 CKPFGRLWWDEIVPTVVTRAEPHNQVIIHP 756



 Score = 21.6 bits (44), Expect(2) = 3e-08
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 216 VPDYAVTFKDVFSKECR 166
           VPDYA+T+ D   K C+
Sbjct: 714 VPDYALTYVD--GKSCK 728


>gb|AAK71870.1| chromomethylase 3 [Arabidopsis thaliana]
          Length = 839

 Score = 61.6 bits (148), Expect(2) = 3e-08
 Identities = 24/30 (80%), Positives = 27/30 (90%)
 Frame = -3

Query: 92  CRPFRRLWWDVIVPIVVTRAEPHNQIILHP 3
           C+PF RLWWD IVP VVTRAEPHNQ+I+HP
Sbjct: 727 CKPFGRLWWDEIVPTVVTRAEPHNQVIIHP 756



 Score = 21.6 bits (44), Expect(2) = 3e-08
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 216 VPDYAVTFKDVFSKECR 166
           VPDYA+T+ D   K C+
Sbjct: 714 VPDYALTYVD--GKSCK 728


>gb|AAK69756.1|AF383170_1 chromomethylase CMT3 [Arabidopsis thaliana]
          Length = 839

 Score = 61.6 bits (148), Expect(2) = 3e-08
 Identities = 24/30 (80%), Positives = 27/30 (90%)
 Frame = -3

Query: 92  CRPFRRLWWDVIVPIVVTRAEPHNQIILHP 3
           C+PF RLWWD IVP VVTRAEPHNQ+I+HP
Sbjct: 727 CKPFGRLWWDEIVPTVVTRAEPHNQVIIHP 756



 Score = 21.6 bits (44), Expect(2) = 3e-08
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -2

Query: 216 VPDYAVTFKDVFSKECR 166
           VPDYA+T+ D   K C+
Sbjct: 714 VPDYALTYVD--GKSCK 728


>emb|CAQ18903.1| chromomethylase [Nicotiana sylvestris] gi|169977314|emb|CAQ18904.1|
           chromomethylase [Nicotiana sylvestris]
           gi|169977316|emb|CAQ18905.1| chromomethylase [Nicotiana
           sylvestris] gi|169977318|emb|CAQ18906.1| chromomethylase
           [Nicotiana sylvestris]
          Length = 741

 Score = 58.9 bits (141), Expect(2) = 3e-07
 Identities = 24/29 (82%), Positives = 26/29 (89%)
 Frame = -3

Query: 89  RPFRRLWWDVIVPIVVTRAEPHNQIILHP 3
           +PF RLWWD IVP VVTRAEPHNQ+ILHP
Sbjct: 629 KPFGRLWWDEIVPTVVTRAEPHNQVILHP 657



 Score = 20.8 bits (42), Expect(2) = 3e-07
 Identities = 7/8 (87%), Positives = 8/8 (100%)
 Frame = -2

Query: 216 VPDYAVTF 193
           VPDYA+TF
Sbjct: 615 VPDYAITF 622