BLASTX nr result

ID: Coptis24_contig00004894 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004894
         (1062 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311140.1| predicted protein [Populus trichocarpa] gi|2...   588   e-166
ref|XP_002276242.1| PREDICTED: uncharacterized protein LOC100260...   580   e-163
emb|CAN66273.1| hypothetical protein VITISV_018034 [Vitis vinifera]   580   e-163
ref|XP_004147703.1| PREDICTED: protein-tyrosine-phosphatase MKP1...   578   e-162
ref|XP_002316314.1| predicted protein [Populus trichocarpa] gi|2...   577   e-162

>ref|XP_002311140.1| predicted protein [Populus trichocarpa] gi|222850960|gb|EEE88507.1|
            predicted protein [Populus trichocarpa]
          Length = 794

 Score =  588 bits (1517), Expect = e-166
 Identities = 281/354 (79%), Positives = 312/354 (88%)
 Frame = -1

Query: 1062 GSDDVGEWPQPATPSGSKPGEGLKLDLSSFQKNPDPAGSFVNRDRIAFFDKECSKVADHI 883
            GSDD GEWPQP TPSG+K GE LKLDLSS Q+ PD  G  V +DRIAFFDKECSKVA+H+
Sbjct: 106  GSDDSGEWPQPPTPSGNKSGERLKLDLSSIQRTPDRNGGLVKKDRIAFFDKECSKVAEHV 165

Query: 882  YLGGDAVARNRDILRQNGITHVLNCVGFVCPEYFKSDLVYKTLWLQDSPSEDITSILYDV 703
            YLGGDAVAR+R+IL+QNGITHVLNCVGFVCPEYFK+D VY+TLWLQDSPSEDITSILYDV
Sbjct: 166  YLGGDAVARDREILKQNGITHVLNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDV 225

Query: 702  FDYFEDDREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIANPNMG 523
            FDYFED REQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIA+PNMG
Sbjct: 226  FDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMG 285

Query: 522  FACQLLQCQKRVHAIPLSPSSLLRMYRMAPHSSYDALHLVPKMLNEPSPSALDSRGAFIV 343
            FACQLLQCQKRVHA PLSPSSLLRMYR+APHS YD LHLVP+MLN+PSPSALDSRGAFIV
Sbjct: 286  FACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPRMLNDPSPSALDSRGAFIV 345

Query: 342  HVPSAIYVWIGKSCEPIMERDAKGAAFQVVRYERVQGPILTVEEGDEPSEFWDAFSSLTL 163
            H+PS+IYVWIGK+CE IMERDA+GA  Q+VRYER QGPI+ V+EG+EP+ FWDAFS    
Sbjct: 346  HIPSSIYVWIGKNCEAIMERDARGAVCQIVRYERAQGPIIVVKEGEEPARFWDAFSYYLP 405

Query: 162  IVDKSCNGVQAVKDKGESLVNSGSGSRKVDSYDVDFQLFQKAIAGGVVPPFSSS 1
            ++DKS NG     D+G S      G RKVD+Y+VDF++FQKAI GG VPPF+SS
Sbjct: 406  LMDKSANG----GDRGGSRAKICPGERKVDTYNVDFEIFQKAIKGGFVPPFASS 455


>ref|XP_002276242.1| PREDICTED: uncharacterized protein LOC100260475 [Vitis vinifera]
          Length = 856

 Score =  580 bits (1495), Expect = e-163
 Identities = 280/356 (78%), Positives = 317/356 (89%), Gaps = 3/356 (0%)
 Frame = -1

Query: 1059 SDDVGEWPQPATPSG---SKPGEGLKLDLSSFQKNPDPAGSFVNRDRIAFFDKECSKVAD 889
            SDDVGEWPQP TPSG   +K G+ LKLDLS+ QKNPD  G  V RD+IAFFDKECSKVA+
Sbjct: 100  SDDVGEWPQPPTPSGRDMNKGGDRLKLDLSAIQKNPDKNGGLVRRDKIAFFDKECSKVAE 159

Query: 888  HIYLGGDAVARNRDILRQNGITHVLNCVGFVCPEYFKSDLVYKTLWLQDSPSEDITSILY 709
            HIYLGGDAVA++R+IL+QN ITH+LNCVGFVCPEYF++D VY+TLWLQDSPSEDITSILY
Sbjct: 160  HIYLGGDAVAKDREILKQNRITHILNCVGFVCPEYFRADFVYRTLWLQDSPSEDITSILY 219

Query: 708  DVFDYFEDDREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIANPN 529
            DVFDYFED REQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSF+DAFQYVKAARGIA+PN
Sbjct: 220  DVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARGIADPN 279

Query: 528  MGFACQLLQCQKRVHAIPLSPSSLLRMYRMAPHSSYDALHLVPKMLNEPSPSALDSRGAF 349
            MGFACQLLQCQKRVHA PLSPSSLLRMYR+APHS YD LHLVPKMLN+PSPSALDSRGAF
Sbjct: 280  MGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLNDPSPSALDSRGAF 339

Query: 348  IVHVPSAIYVWIGKSCEPIMERDAKGAAFQVVRYERVQGPILTVEEGDEPSEFWDAFSSL 169
            IVHVPSAIYVWIGK+CE IMERDA+ A  Q+VRYERVQGPI  ++EG+E S FWDAFS+L
Sbjct: 340  IVHVPSAIYVWIGKNCEFIMERDARAAVCQIVRYERVQGPITVIKEGEEQSYFWDAFSNL 399

Query: 168  TLIVDKSCNGVQAVKDKGESLVNSGSGSRKVDSYDVDFQLFQKAIAGGVVPPFSSS 1
              ++DKS NGV+     G+S+V+   G RKVDSY+VD+++F+KAI+GG VPPF+SS
Sbjct: 400  LPLMDKSVNGVEV----GKSMVDVCLGERKVDSYNVDYEIFKKAISGGFVPPFASS 451


>emb|CAN66273.1| hypothetical protein VITISV_018034 [Vitis vinifera]
          Length = 856

 Score =  580 bits (1495), Expect = e-163
 Identities = 280/356 (78%), Positives = 317/356 (89%), Gaps = 3/356 (0%)
 Frame = -1

Query: 1059 SDDVGEWPQPATPSG---SKPGEGLKLDLSSFQKNPDPAGSFVNRDRIAFFDKECSKVAD 889
            SDDVGEWPQP TPSG   +K G+ LKLDLS+ QKNPD  G  V RD+IAFFDKECSKVA+
Sbjct: 100  SDDVGEWPQPPTPSGRDMNKGGDRLKLDLSAIQKNPDKNGGLVRRDKIAFFDKECSKVAE 159

Query: 888  HIYLGGDAVARNRDILRQNGITHVLNCVGFVCPEYFKSDLVYKTLWLQDSPSEDITSILY 709
            HIYLGGDAVA++R+IL+QN ITH+LNCVGFVCPEYF++D VY+TLWLQDSPSEDITSILY
Sbjct: 160  HIYLGGDAVAKDREILKQNRITHILNCVGFVCPEYFRADFVYRTLWLQDSPSEDITSILY 219

Query: 708  DVFDYFEDDREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIANPN 529
            DVFDYFED REQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSF+DAFQYVKAARGIA+PN
Sbjct: 220  DVFDYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFEDAFQYVKAARGIADPN 279

Query: 528  MGFACQLLQCQKRVHAIPLSPSSLLRMYRMAPHSSYDALHLVPKMLNEPSPSALDSRGAF 349
            MGFACQLLQCQKRVHA PLSPSSLLRMYR+APHS YD LHLVPKMLN+PSPSALDSRGAF
Sbjct: 280  MGFACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLNDPSPSALDSRGAF 339

Query: 348  IVHVPSAIYVWIGKSCEPIMERDAKGAAFQVVRYERVQGPILTVEEGDEPSEFWDAFSSL 169
            IVHVPSAIYVWIGK+CE IMERDA+ A  Q+VRYERVQGPI  ++EG+E S FWDAFS+L
Sbjct: 340  IVHVPSAIYVWIGKNCEFIMERDARAAVCQIVRYERVQGPITVIKEGEEQSYFWDAFSNL 399

Query: 168  TLIVDKSCNGVQAVKDKGESLVNSGSGSRKVDSYDVDFQLFQKAIAGGVVPPFSSS 1
              ++DKS NGV+     G+S+V+   G RKVDSY+VD+++F+KAI+GG VPPF+SS
Sbjct: 400  LPLMDKSVNGVEV----GKSMVDVCLGERKVDSYNVDYEIFKKAISGGFVPPFASS 451


>ref|XP_004147703.1| PREDICTED: protein-tyrosine-phosphatase MKP1-like [Cucumis sativus]
            gi|449514954|ref|XP_004164524.1| PREDICTED:
            protein-tyrosine-phosphatase MKP1-like [Cucumis sativus]
          Length = 858

 Score =  578 bits (1489), Expect = e-162
 Identities = 275/354 (77%), Positives = 308/354 (87%)
 Frame = -1

Query: 1062 GSDDVGEWPQPATPSGSKPGEGLKLDLSSFQKNPDPAGSFVNRDRIAFFDKECSKVADHI 883
            GSDD+GEWPQP TPSG    E LKLDLS+ Q+NPD     V RD+IAFFDKECSKVA+H+
Sbjct: 102  GSDDIGEWPQPPTPSGRGNSERLKLDLSTIQRNPDKNCGLVKRDKIAFFDKECSKVAEHV 161

Query: 882  YLGGDAVARNRDILRQNGITHVLNCVGFVCPEYFKSDLVYKTLWLQDSPSEDITSILYDV 703
            YLGGDAVAR+RDIL+QNGITHVLNCVGFVCPEYFK D VY+TLWLQDSPSEDITSILYDV
Sbjct: 162  YLGGDAVARDRDILKQNGITHVLNCVGFVCPEYFKDDFVYRTLWLQDSPSEDITSILYDV 221

Query: 702  FDYFEDDREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIANPNMG 523
            FDYFED REQ GRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIA+PNMG
Sbjct: 222  FDYFEDVREQNGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMG 281

Query: 522  FACQLLQCQKRVHAIPLSPSSLLRMYRMAPHSSYDALHLVPKMLNEPSPSALDSRGAFIV 343
            FACQLLQCQKRVHA PLSPSSLLRMYR+APHS YD LHLVPKMLN+PSPSALDSRGAFI+
Sbjct: 282  FACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPKMLNDPSPSALDSRGAFII 341

Query: 342  HVPSAIYVWIGKSCEPIMERDAKGAAFQVVRYERVQGPILTVEEGDEPSEFWDAFSSLTL 163
            H+PSAI+VW+GK+CE IMERDA+GA  Q+VRYERVQGPI  ++EG+EP+ FWD+F++L  
Sbjct: 342  HIPSAIFVWLGKNCEAIMERDARGAVVQIVRYERVQGPIYVIKEGEEPTNFWDSFANLLP 401

Query: 162  IVDKSCNGVQAVKDKGESLVNSGSGSRKVDSYDVDFQLFQKAIAGGVVPPFSSS 1
            ++DKS + +    + GE       G RKVDSYDVDF++FQKAI GG VPPF SS
Sbjct: 402  LMDKSNSKI----NLGELKAKPYPGERKVDSYDVDFEIFQKAITGGFVPPFPSS 451


>ref|XP_002316314.1| predicted protein [Populus trichocarpa] gi|222865354|gb|EEF02485.1|
            predicted protein [Populus trichocarpa]
          Length = 500

 Score =  577 bits (1486), Expect = e-162
 Identities = 277/353 (78%), Positives = 308/353 (87%)
 Frame = -1

Query: 1059 SDDVGEWPQPATPSGSKPGEGLKLDLSSFQKNPDPAGSFVNRDRIAFFDKECSKVADHIY 880
            SDD+GEWPQP TPSG+K GE LKLDLSS Q+NPD     V +DRIAFF KECSKVA+H+Y
Sbjct: 67   SDDLGEWPQPPTPSGNKSGERLKLDLSSIQRNPDRNVGLVKKDRIAFFGKECSKVAEHVY 126

Query: 879  LGGDAVARNRDILRQNGITHVLNCVGFVCPEYFKSDLVYKTLWLQDSPSEDITSILYDVF 700
            LGGDAVAR R+IL+QNGITHVLNCVGFVCPEYFK+D VY+TLWLQDSPSEDITSILYDVF
Sbjct: 127  LGGDAVAREREILKQNGITHVLNCVGFVCPEYFKADFVYRTLWLQDSPSEDITSILYDVF 186

Query: 699  DYFEDDREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIANPNMGF 520
            DYFED REQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIA+PNMGF
Sbjct: 187  DYFEDVREQGGRVFVHCCQGVSRSTSLVIAYLMWREGQSFDDAFQYVKAARGIADPNMGF 246

Query: 519  ACQLLQCQKRVHAIPLSPSSLLRMYRMAPHSSYDALHLVPKMLNEPSPSALDSRGAFIVH 340
            ACQLLQCQKRVHA PLSPSSLLRMYR+APHS YD LHLVP+MLN+PS SALDSRGAFIVH
Sbjct: 247  ACQLLQCQKRVHAFPLSPSSLLRMYRIAPHSPYDPLHLVPRMLNDPSLSALDSRGAFIVH 306

Query: 339  VPSAIYVWIGKSCEPIMERDAKGAAFQVVRYERVQGPILTVEEGDEPSEFWDAFSSLTLI 160
            +PS+IYVWIGK+CE IMERDA+GA  Q+VRYER  GPI+ V+EG+EP+ FWDAFS    +
Sbjct: 307  IPSSIYVWIGKNCEAIMERDARGAVCQIVRYERALGPIIVVKEGEEPAYFWDAFSYYLPL 366

Query: 159  VDKSCNGVQAVKDKGESLVNSGSGSRKVDSYDVDFQLFQKAIAGGVVPPFSSS 1
            +DKS NG     D GES      G RKVD+Y+VDF++FQKAI GG VPPF++S
Sbjct: 367  MDKSANG----GDSGESRTKIFPGERKVDAYNVDFEIFQKAIKGGFVPPFATS 415


Top