BLASTX nr result

ID: Coptis24_contig00004893 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004893
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31744.3| unnamed protein product [Vitis vinifera]              103   2e-20
ref|XP_002276242.1| PREDICTED: uncharacterized protein LOC100260...   103   2e-20
ref|XP_002311140.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
emb|CAN66273.1| hypothetical protein VITISV_018034 [Vitis vinifera]   103   2e-20
ref|XP_002316314.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19

>emb|CBI31744.3| unnamed protein product [Vitis vinifera]
          Length = 725

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/87 (57%), Positives = 67/87 (77%)
 Frame = -2

Query: 284 RDAKGAAFQVVRYERVQGPILTVEEGDEPSEFWDAFSSLTLIVDKSCNGVQAVKDKGDSL 105
           RDA+ A  Q+VRYERVQGPI  ++EG+E S FWDAFS+L  ++DKS NGV+     G S+
Sbjct: 321 RDARAAVCQIVRYERVQGPITVIKEGEEQSYFWDAFSNLLPLMDKSVNGVEV----GKSM 376

Query: 104 VNSGSGSRKVDSYDVDFQLFQKAIAGG 24
           V+   G RKVDSY+VD+++F+KAI+GG
Sbjct: 377 VDVCLGERKVDSYNVDYEIFKKAISGG 403


>ref|XP_002276242.1| PREDICTED: uncharacterized protein LOC100260475 [Vitis vinifera]
          Length = 856

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/87 (57%), Positives = 67/87 (77%)
 Frame = -2

Query: 284 RDAKGAAFQVVRYERVQGPILTVEEGDEPSEFWDAFSSLTLIVDKSCNGVQAVKDKGDSL 105
           RDA+ A  Q+VRYERVQGPI  ++EG+E S FWDAFS+L  ++DKS NGV+     G S+
Sbjct: 361 RDARAAVCQIVRYERVQGPITVIKEGEEQSYFWDAFSNLLPLMDKSVNGVEV----GKSM 416

Query: 104 VNSGSGSRKVDSYDVDFQLFQKAIAGG 24
           V+   G RKVDSY+VD+++F+KAI+GG
Sbjct: 417 VDVCLGERKVDSYNVDYEIFKKAISGG 443


>ref|XP_002311140.1| predicted protein [Populus trichocarpa] gi|222850960|gb|EEE88507.1|
           predicted protein [Populus trichocarpa]
          Length = 794

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/87 (57%), Positives = 63/87 (72%)
 Frame = -2

Query: 284 RDAKGAAFQVVRYERVQGPILTVEEGDEPSEFWDAFSSLTLIVDKSCNGVQAVKDKGDSL 105
           RDA+GA  Q+VRYER QGPI+ V+EG+EP+ FWDAFS    ++DKS NG     D+G S 
Sbjct: 365 RDARGAVCQIVRYERAQGPIIVVKEGEEPARFWDAFSYYLPLMDKSANG----GDRGGSR 420

Query: 104 VNSGSGSRKVDSYDVDFQLFQKAIAGG 24
                G RKVD+Y+VDF++FQKAI GG
Sbjct: 421 AKICPGERKVDTYNVDFEIFQKAIKGG 447


>emb|CAN66273.1| hypothetical protein VITISV_018034 [Vitis vinifera]
          Length = 856

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/87 (57%), Positives = 67/87 (77%)
 Frame = -2

Query: 284 RDAKGAAFQVVRYERVQGPILTVEEGDEPSEFWDAFSSLTLIVDKSCNGVQAVKDKGDSL 105
           RDA+ A  Q+VRYERVQGPI  ++EG+E S FWDAFS+L  ++DKS NGV+     G S+
Sbjct: 361 RDARAAVCQIVRYERVQGPITVIKEGEEQSYFWDAFSNLLPLMDKSVNGVEV----GKSM 416

Query: 104 VNSGSGSRKVDSYDVDFQLFQKAIAGG 24
           V+   G RKVDSY+VD+++F+KAI+GG
Sbjct: 417 VDVCLGERKVDSYNVDYEIFKKAISGG 443


>ref|XP_002316314.1| predicted protein [Populus trichocarpa] gi|222865354|gb|EEF02485.1|
           predicted protein [Populus trichocarpa]
          Length = 500

 Score =  100 bits (248), Expect = 2e-19
 Identities = 49/87 (56%), Positives = 62/87 (71%)
 Frame = -2

Query: 284 RDAKGAAFQVVRYERVQGPILTVEEGDEPSEFWDAFSSLTLIVDKSCNGVQAVKDKGDSL 105
           RDA+GA  Q+VRYER  GPI+ V+EG+EP+ FWDAFS    ++DKS NG     D G+S 
Sbjct: 325 RDARGAVCQIVRYERALGPIIVVKEGEEPAYFWDAFSYYLPLMDKSANG----GDSGESR 380

Query: 104 VNSGSGSRKVDSYDVDFQLFQKAIAGG 24
                G RKVD+Y+VDF++FQKAI GG
Sbjct: 381 TKIFPGERKVDAYNVDFEIFQKAIKGG 407


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