BLASTX nr result
ID: Coptis24_contig00004893
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004893 (285 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI31744.3| unnamed protein product [Vitis vinifera] 103 2e-20 ref|XP_002276242.1| PREDICTED: uncharacterized protein LOC100260... 103 2e-20 ref|XP_002311140.1| predicted protein [Populus trichocarpa] gi|2... 103 2e-20 emb|CAN66273.1| hypothetical protein VITISV_018034 [Vitis vinifera] 103 2e-20 ref|XP_002316314.1| predicted protein [Populus trichocarpa] gi|2... 100 2e-19 >emb|CBI31744.3| unnamed protein product [Vitis vinifera] Length = 725 Score = 103 bits (256), Expect = 2e-20 Identities = 50/87 (57%), Positives = 67/87 (77%) Frame = -2 Query: 284 RDAKGAAFQVVRYERVQGPILTVEEGDEPSEFWDAFSSLTLIVDKSCNGVQAVKDKGDSL 105 RDA+ A Q+VRYERVQGPI ++EG+E S FWDAFS+L ++DKS NGV+ G S+ Sbjct: 321 RDARAAVCQIVRYERVQGPITVIKEGEEQSYFWDAFSNLLPLMDKSVNGVEV----GKSM 376 Query: 104 VNSGSGSRKVDSYDVDFQLFQKAIAGG 24 V+ G RKVDSY+VD+++F+KAI+GG Sbjct: 377 VDVCLGERKVDSYNVDYEIFKKAISGG 403 >ref|XP_002276242.1| PREDICTED: uncharacterized protein LOC100260475 [Vitis vinifera] Length = 856 Score = 103 bits (256), Expect = 2e-20 Identities = 50/87 (57%), Positives = 67/87 (77%) Frame = -2 Query: 284 RDAKGAAFQVVRYERVQGPILTVEEGDEPSEFWDAFSSLTLIVDKSCNGVQAVKDKGDSL 105 RDA+ A Q+VRYERVQGPI ++EG+E S FWDAFS+L ++DKS NGV+ G S+ Sbjct: 361 RDARAAVCQIVRYERVQGPITVIKEGEEQSYFWDAFSNLLPLMDKSVNGVEV----GKSM 416 Query: 104 VNSGSGSRKVDSYDVDFQLFQKAIAGG 24 V+ G RKVDSY+VD+++F+KAI+GG Sbjct: 417 VDVCLGERKVDSYNVDYEIFKKAISGG 443 >ref|XP_002311140.1| predicted protein [Populus trichocarpa] gi|222850960|gb|EEE88507.1| predicted protein [Populus trichocarpa] Length = 794 Score = 103 bits (256), Expect = 2e-20 Identities = 50/87 (57%), Positives = 63/87 (72%) Frame = -2 Query: 284 RDAKGAAFQVVRYERVQGPILTVEEGDEPSEFWDAFSSLTLIVDKSCNGVQAVKDKGDSL 105 RDA+GA Q+VRYER QGPI+ V+EG+EP+ FWDAFS ++DKS NG D+G S Sbjct: 365 RDARGAVCQIVRYERAQGPIIVVKEGEEPARFWDAFSYYLPLMDKSANG----GDRGGSR 420 Query: 104 VNSGSGSRKVDSYDVDFQLFQKAIAGG 24 G RKVD+Y+VDF++FQKAI GG Sbjct: 421 AKICPGERKVDTYNVDFEIFQKAIKGG 447 >emb|CAN66273.1| hypothetical protein VITISV_018034 [Vitis vinifera] Length = 856 Score = 103 bits (256), Expect = 2e-20 Identities = 50/87 (57%), Positives = 67/87 (77%) Frame = -2 Query: 284 RDAKGAAFQVVRYERVQGPILTVEEGDEPSEFWDAFSSLTLIVDKSCNGVQAVKDKGDSL 105 RDA+ A Q+VRYERVQGPI ++EG+E S FWDAFS+L ++DKS NGV+ G S+ Sbjct: 361 RDARAAVCQIVRYERVQGPITVIKEGEEQSYFWDAFSNLLPLMDKSVNGVEV----GKSM 416 Query: 104 VNSGSGSRKVDSYDVDFQLFQKAIAGG 24 V+ G RKVDSY+VD+++F+KAI+GG Sbjct: 417 VDVCLGERKVDSYNVDYEIFKKAISGG 443 >ref|XP_002316314.1| predicted protein [Populus trichocarpa] gi|222865354|gb|EEF02485.1| predicted protein [Populus trichocarpa] Length = 500 Score = 100 bits (248), Expect = 2e-19 Identities = 49/87 (56%), Positives = 62/87 (71%) Frame = -2 Query: 284 RDAKGAAFQVVRYERVQGPILTVEEGDEPSEFWDAFSSLTLIVDKSCNGVQAVKDKGDSL 105 RDA+GA Q+VRYER GPI+ V+EG+EP+ FWDAFS ++DKS NG D G+S Sbjct: 325 RDARGAVCQIVRYERALGPIIVVKEGEEPAYFWDAFSYYLPLMDKSANG----GDSGESR 380 Query: 104 VNSGSGSRKVDSYDVDFQLFQKAIAGG 24 G RKVD+Y+VDF++FQKAI GG Sbjct: 381 TKIFPGERKVDAYNVDFEIFQKAIKGG 407