BLASTX nr result

ID: Coptis24_contig00004890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004890
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31551.3| unnamed protein product [Vitis vinifera]               93   7e-17
ref|XP_002530405.1| conserved hypothetical protein [Ricinus comm...    92   1e-16
ref|XP_002315182.1| predicted protein [Populus trichocarpa] gi|1...    92   1e-16
ref|XP_002312137.1| predicted protein [Populus trichocarpa] gi|2...    91   2e-16
ref|XP_003538440.1| PREDICTED: immediate early response 3-intera...    88   2e-15

>emb|CBI31551.3| unnamed protein product [Vitis vinifera]
          Length = 88

 Score = 92.8 bits (229), Expect = 7e-17
 Identities = 47/77 (61%), Positives = 53/77 (68%)
 Frame = -2

Query: 544 MGLWTXXXXXXXXXXXXXXXXXERFLAPRGWSFAEVPPGTAKSLKGQLIGLIYATQYLRL 365
           MGLWT                 +RFLAPRGWSF+E   G  KS KGQLIGLIYATQYLR+
Sbjct: 12  MGLWTLLEGCLLIANALAILNEDRFLAPRGWSFSEFSGGRTKSFKGQLIGLIYATQYLRV 71

Query: 364 PLILLNAITIVVKLVSG 314
           PLILLN+I I++KLVSG
Sbjct: 72  PLILLNSICIIIKLVSG 88


>ref|XP_002530405.1| conserved hypothetical protein [Ricinus communis]
           gi|223530054|gb|EEF31975.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 77

 Score = 92.0 bits (227), Expect = 1e-16
 Identities = 47/77 (61%), Positives = 53/77 (68%)
 Frame = -2

Query: 544 MGLWTXXXXXXXXXXXXXXXXXERFLAPRGWSFAEVPPGTAKSLKGQLIGLIYATQYLRL 365
           MGLWT                 +RFLAPRGWSF+E   G  KS KGQLIGLIYATQY+R+
Sbjct: 1   MGLWTLLEGFLLLANALAILNEDRFLAPRGWSFSEFSGGRTKSFKGQLIGLIYATQYMRV 60

Query: 364 PLILLNAITIVVKLVSG 314
           PL++LNAI IVVKLVSG
Sbjct: 61  PLMILNAICIVVKLVSG 77


>ref|XP_002315182.1| predicted protein [Populus trichocarpa] gi|118482465|gb|ABK93155.1|
           unknown [Populus trichocarpa]
           gi|222864222|gb|EEF01353.1| predicted protein [Populus
           trichocarpa]
          Length = 77

 Score = 91.7 bits (226), Expect = 1e-16
 Identities = 47/77 (61%), Positives = 53/77 (68%)
 Frame = -2

Query: 544 MGLWTXXXXXXXXXXXXXXXXXERFLAPRGWSFAEVPPGTAKSLKGQLIGLIYATQYLRL 365
           MGLWT                 +RFLAPRGWSF+E   G  KSLKGQLIGLIYATQY+R+
Sbjct: 1   MGLWTLLEGFLLLANAFAILNEDRFLAPRGWSFSEFSVGRTKSLKGQLIGLIYATQYMRV 60

Query: 364 PLILLNAITIVVKLVSG 314
           PLI+LN+I I VKLVSG
Sbjct: 61  PLIILNSICIFVKLVSG 77


>ref|XP_002312137.1| predicted protein [Populus trichocarpa] gi|222851957|gb|EEE89504.1|
           predicted protein [Populus trichocarpa]
          Length = 77

 Score = 91.3 bits (225), Expect = 2e-16
 Identities = 46/77 (59%), Positives = 53/77 (68%)
 Frame = -2

Query: 544 MGLWTXXXXXXXXXXXXXXXXXERFLAPRGWSFAEVPPGTAKSLKGQLIGLIYATQYLRL 365
           MGLWT                 +RFLAPRGWSF+E   G  KSLKGQLIGLIYATQY+R+
Sbjct: 1   MGLWTLLEGFLLLANAFAILNEDRFLAPRGWSFSEFSVGRTKSLKGQLIGLIYATQYMRV 60

Query: 364 PLILLNAITIVVKLVSG 314
           PL++LN+I I VKLVSG
Sbjct: 61  PLVILNSICIFVKLVSG 77


>ref|XP_003538440.1| PREDICTED: immediate early response 3-interacting protein 1
           [Glycine max]
          Length = 77

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 46/77 (59%), Positives = 50/77 (64%)
 Frame = -2

Query: 544 MGLWTXXXXXXXXXXXXXXXXXERFLAPRGWSFAEVPPGTAKSLKGQLIGLIYATQYLRL 365
           MGLWT                 +RFLAPRGW F +   G  KS KGQLIGLIYATQYLR+
Sbjct: 1   MGLWTLLEGFLLLANALAILNEDRFLAPRGWGFQDFSGGRTKSFKGQLIGLIYATQYLRV 60

Query: 364 PLILLNAITIVVKLVSG 314
           PLILLN+I I VKLVSG
Sbjct: 61  PLILLNSICIFVKLVSG 77


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