BLASTX nr result

ID: Coptis24_contig00004879 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004879
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004138201.1| PREDICTED: uncharacterized protein LOC101209...   279   1e-73
ref|XP_002318556.1| predicted protein [Populus trichocarpa] gi|2...   277   7e-73
ref|XP_002512008.1| conserved hypothetical protein [Ricinus comm...   273   1e-71
gb|ABB29947.1| cell growth defect factor-like [Solanum tuberosum]     271   3e-71
ref|NP_197695.1| uncharacterized protein [Arabidopsis thaliana] ...   271   5e-71

>ref|XP_004138201.1| PREDICTED: uncharacterized protein LOC101209271 [Cucumis sativus]
           gi|449525099|ref|XP_004169557.1| PREDICTED:
           uncharacterized protein LOC101226625 [Cucumis sativus]
          Length = 251

 Score =  279 bits (714), Expect = 1e-73
 Identities = 130/164 (79%), Positives = 149/164 (90%)
 Frame = +2

Query: 23  NLPKFQRTKVWDPYKRLGISKDASEDEIWSSRNFLLQQYAGHERSEESIEGAFEKILMNS 202
           N+ KF R +VWDPYKRLG+S DASE+EIW +RNFLLQQY+GHERSEESIE AFEKILM S
Sbjct: 50  NVTKFPRVRVWDPYKRLGVSSDASEEEIWGARNFLLQQYSGHERSEESIEAAFEKILMAS 109

Query: 203 YKERKKTKFNLKTRLKKRVEESPSWVKTLLDFVELPPPVIIMRRLFLFAFMGGWSIMNSA 382
           ++ RKKTK NLKTRLKK+VEESP W+K LL+FVELPP  +I RRLFLFAFMGGWSIMNSA
Sbjct: 110 FQHRKKTKINLKTRLKKQVEESPPWIKNLLNFVELPPTDVIFRRLFLFAFMGGWSIMNSA 169

Query: 383 DGGPAFQVAISLGACIYFLNDKTKSLARASILGFGALVVGWICG 514
           +GGPAFQVA+SL ACIYFLN+KTKS+ARASI+GFG+LVVGW+CG
Sbjct: 170 EGGPAFQVAVSLAACIYFLNEKTKSVARASIIGFGSLVVGWVCG 213


>ref|XP_002318556.1| predicted protein [Populus trichocarpa] gi|222859229|gb|EEE96776.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  277 bits (708), Expect = 7e-73
 Identities = 131/164 (79%), Positives = 144/164 (87%)
 Frame = +2

Query: 23  NLPKFQRTKVWDPYKRLGISKDASEDEIWSSRNFLLQQYAGHERSEESIEGAFEKILMNS 202
           N+PKF R  VWDPYKRLGIS  ASE+EIWSSRNFL+QQYAGHE SEESIE AFEK+LM S
Sbjct: 65  NIPKFPRMNVWDPYKRLGISPYASEEEIWSSRNFLMQQYAGHETSEESIEAAFEKLLMTS 124

Query: 203 YKERKKTKFNLKTRLKKRVEESPSWVKTLLDFVELPPPVIIMRRLFLFAFMGGWSIMNSA 382
           ++ERKKTK NLKTRLKK+VEESP WVK LLDFVELPP  +I RRLFLFAFMGGWSIMNSA
Sbjct: 125 FRERKKTKINLKTRLKKKVEESPPWVKNLLDFVELPPVEVIFRRLFLFAFMGGWSIMNSA 184

Query: 383 DGGPAFQVAISLGACIYFLNDKTKSLARASILGFGALVVGWICG 514
           +GGPAFQVA+SL ACIYFLN+KTKSL RA I+G GAL  GW+CG
Sbjct: 185 EGGPAFQVAVSLAACIYFLNEKTKSLGRAFIIGLGALAAGWVCG 228


>ref|XP_002512008.1| conserved hypothetical protein [Ricinus communis]
           gi|223549188|gb|EEF50677.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 256

 Score =  273 bits (697), Expect = 1e-71
 Identities = 129/164 (78%), Positives = 144/164 (87%)
 Frame = +2

Query: 23  NLPKFQRTKVWDPYKRLGISKDASEDEIWSSRNFLLQQYAGHERSEESIEGAFEKILMNS 202
           N+ KF R  VWDPYKRLGIS  ASE+EIWSSRNFLL+QYAGHERSEESIE AFEK+L  S
Sbjct: 55  NISKFPRVNVWDPYKRLGISPYASEEEIWSSRNFLLEQYAGHERSEESIEAAFEKLLTTS 114

Query: 203 YKERKKTKFNLKTRLKKRVEESPSWVKTLLDFVELPPPVIIMRRLFLFAFMGGWSIMNSA 382
           +KERKKTK NLKTRLKK+VEESP WVK++L+FVELPP  +I RRLFLFAFMGGWSIMNSA
Sbjct: 115 FKERKKTKINLKTRLKKKVEESPPWVKSILNFVELPPVEVIFRRLFLFAFMGGWSIMNSA 174

Query: 383 DGGPAFQVAISLGACIYFLNDKTKSLARASILGFGALVVGWICG 514
           +GGPAFQVA+SL ACIYFLN+KTKSL RA I+G GAL  GW+CG
Sbjct: 175 EGGPAFQVAVSLAACIYFLNEKTKSLGRAFIIGLGALAAGWVCG 218


>gb|ABB29947.1| cell growth defect factor-like [Solanum tuberosum]
          Length = 251

 Score =  271 bits (694), Expect = 3e-71
 Identities = 127/164 (77%), Positives = 141/164 (85%)
 Frame = +2

Query: 23  NLPKFQRTKVWDPYKRLGISKDASEDEIWSSRNFLLQQYAGHERSEESIEGAFEKILMNS 202
           N+PKF R  VWDPYKRLGIS+DASE+E+WSSRNFLL QYA HERS ESIE AFEKILM S
Sbjct: 50  NIPKFSRLNVWDPYKRLGISRDASEEEVWSSRNFLLNQYANHERSAESIEAAFEKILMKS 109

Query: 203 YKERKKTKFNLKTRLKKRVEESPSWVKTLLDFVELPPPVIIMRRLFLFAFMGGWSIMNSA 382
           +  RKKTK NLKTRLKK+VEESP WV+ LL FVELPPPVII+RRLFLF FM  WS+MNSA
Sbjct: 110 FINRKKTKINLKTRLKKQVEESPPWVQNLLSFVELPPPVIILRRLFLFGFMACWSVMNSA 169

Query: 383 DGGPAFQVAISLGACIYFLNDKTKSLARASILGFGALVVGWICG 514
           + GPAFQVAIS GAC+YFLNDKTKSL RA+++GFG LV GW CG
Sbjct: 170 EAGPAFQVAISFGACVYFLNDKTKSLGRAALIGFGGLVAGWFCG 213


>ref|NP_197695.1| uncharacterized protein [Arabidopsis thaliana]
           gi|9759362|dbj|BAB09821.1| unnamed protein product
           [Arabidopsis thaliana] gi|21928168|gb|AAM78111.1|
           AT5g23040/MYJ24_3 [Arabidopsis thaliana]
           gi|23505829|gb|AAN28774.1| At5g23040/MYJ24_3
           [Arabidopsis thaliana] gi|62392260|dbj|BAD95465.1| cell
           growth defect factor [Arabidopsis thaliana]
           gi|332005729|gb|AED93112.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 258

 Score =  271 bits (692), Expect = 5e-71
 Identities = 126/164 (76%), Positives = 145/164 (88%)
 Frame = +2

Query: 23  NLPKFQRTKVWDPYKRLGISKDASEDEIWSSRNFLLQQYAGHERSEESIEGAFEKILMNS 202
           N+P F RT+VWDPYKRLG+S  ASE+EIW+SRNFLLQQYAGHERSEESIEGAFEK+LM+S
Sbjct: 57  NVPTFPRTRVWDPYKRLGVSPYASEEEIWASRNFLLQQYAGHERSEESIEGAFEKLLMSS 116

Query: 203 YKERKKTKFNLKTRLKKRVEESPSWVKTLLDFVELPPPVIIMRRLFLFAFMGGWSIMNSA 382
           +  RKKTK NLK++LKK+VEESP W+K LLDFVE+PP   I RRLFLFAFMGGWSIMNSA
Sbjct: 117 FIRRKKTKINLKSKLKKKVEESPPWLKALLDFVEMPPMDTIFRRLFLFAFMGGWSIMNSA 176

Query: 383 DGGPAFQVAISLGACIYFLNDKTKSLARASILGFGALVVGWICG 514
           +GGPAFQVA+SL AC+YFLN+KTKSL RA ++G GALV GW CG
Sbjct: 177 EGGPAFQVAVSLAACVYFLNEKTKSLGRACLIGIGALVAGWFCG 220


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