BLASTX nr result

ID: Coptis24_contig00004873 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004873
         (636 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283556.2| PREDICTED: uncharacterized protein LOC100255...    96   7e-18
ref|XP_002321570.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
ref|XP_002318023.1| predicted protein [Populus trichocarpa] gi|2...    94   2e-17
gb|ABK93115.1| unknown [Populus trichocarpa] gi|118489648|gb|ABK...    94   2e-17
ref|XP_004138128.1| PREDICTED: uncharacterized protein LOC101212...    92   8e-17

>ref|XP_002283556.2| PREDICTED: uncharacterized protein LOC100255301 [Vitis vinifera]
           gi|297733832|emb|CBI15079.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score = 95.5 bits (236), Expect = 7e-18
 Identities = 51/88 (57%), Positives = 60/88 (68%), Gaps = 5/88 (5%)
 Frame = +1

Query: 46  MAFLLSKT-----FXXXXXXXXXXXXXXLRRFHVEPGPREIALLKPDPALKRYKSYTKSV 210
           MAFLL+K      F               R FHVEPGPRE ALL  +P+LKR+KS+ ++V
Sbjct: 1   MAFLLNKATALSHFRSHSQKTEDSFSLSRRGFHVEPGPREKALLADNPSLKRFKSHKRNV 60

Query: 211 YRLKRVGEVLTIVVAAGCCYEIYVKATM 294
           +RLKRVG+VLTIVV AGCCYEIYVKA M
Sbjct: 61  WRLKRVGDVLTIVVVAGCCYEIYVKAVM 88


>ref|XP_002321570.1| predicted protein [Populus trichocarpa] gi|222868566|gb|EEF05697.1|
           predicted protein [Populus trichocarpa]
          Length = 102

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 45/59 (76%), Positives = 50/59 (84%)
 Frame = +1

Query: 118 RRFHVEPGPREIALLKPDPALKRYKSYTKSVYRLKRVGEVLTIVVAAGCCYEIYVKATM 294
           R FHVEPGPRE ALL  DPALK +KS+ KSV+RLKR G+VLT+VV AGCCYEIYVKA M
Sbjct: 32  RGFHVEPGPREKALLAEDPALKWFKSHKKSVWRLKRAGDVLTLVVVAGCCYEIYVKAVM 90


>ref|XP_002318023.1| predicted protein [Populus trichocarpa] gi|222858696|gb|EEE96243.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 44/59 (74%), Positives = 50/59 (84%)
 Frame = +1

Query: 118 RRFHVEPGPREIALLKPDPALKRYKSYTKSVYRLKRVGEVLTIVVAAGCCYEIYVKATM 294
           R FHVEPGPRE ALL  DP+LKR+KS+ KSV+RLKR G+VLT+VV AGCCYEIYVK  M
Sbjct: 47  RGFHVEPGPREQALLAEDPSLKRFKSHKKSVWRLKRFGDVLTLVVVAGCCYEIYVKTVM 105


>gb|ABK93115.1| unknown [Populus trichocarpa] gi|118489648|gb|ABK96625.1| unknown
           [Populus trichocarpa x Populus deltoides]
          Length = 100

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 44/59 (74%), Positives = 50/59 (84%)
 Frame = +1

Query: 118 RRFHVEPGPREIALLKPDPALKRYKSYTKSVYRLKRVGEVLTIVVAAGCCYEIYVKATM 294
           R FHVEPGPRE ALL  DP+LKR+KS+ KSV+RLKR G+VLT+VV AGCCYEIYVK  M
Sbjct: 30  RGFHVEPGPREQALLAEDPSLKRFKSHKKSVWRLKRFGDVLTLVVVAGCCYEIYVKTVM 88


>ref|XP_004138128.1| PREDICTED: uncharacterized protein LOC101212374 isoform 2 [Cucumis
           sativus]
          Length = 98

 Score = 92.0 bits (227), Expect = 8e-17
 Identities = 44/59 (74%), Positives = 50/59 (84%)
 Frame = +1

Query: 118 RRFHVEPGPREIALLKPDPALKRYKSYTKSVYRLKRVGEVLTIVVAAGCCYEIYVKATM 294
           R FHVEPG RE ALL  DP L+R++S+ K+V RLKRVG+VLTIVV AGCCYEIYVKATM
Sbjct: 28  RGFHVEPGTREKALLAEDPCLRRFRSHKKAVSRLKRVGDVLTIVVVAGCCYEIYVKATM 86


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