BLASTX nr result

ID: Coptis24_contig00004871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004871
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511451.1| conserved hypothetical protein [Ricinus comm...   122   8e-26
ref|XP_002283556.2| PREDICTED: uncharacterized protein LOC100255...   118   1e-24
ref|XP_004138127.1| PREDICTED: uncharacterized protein LOC101212...   115   8e-24
ref|XP_004138128.1| PREDICTED: uncharacterized protein LOC101212...   114   1e-23
ref|XP_002318023.1| predicted protein [Populus trichocarpa] gi|2...   114   2e-23

>ref|XP_002511451.1| conserved hypothetical protein [Ricinus communis]
           gi|223550566|gb|EEF52053.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 101

 Score =  122 bits (305), Expect = 8e-26
 Identities = 62/96 (64%), Positives = 76/96 (79%), Gaps = 3/96 (3%)
 Frame = +3

Query: 9   AFLVSKTSFISHSYKSRSQNVA---LFQSTRGYHIEPGTREKALLLEDPIIKRFKSQKRN 179
           AFL+ K+S IS  ++S SQN     L  S+RG+H+EPGTREKALL EDP +KRFKS K +
Sbjct: 2   AFLL-KSSMISSRFRSHSQNTEKGLLSNSSRGFHVEPGTREKALLAEDPALKRFKSHKSS 60

Query: 180 VRGLKRMGDILAIVVAAGCCYQIYVKSVMREEARKQ 287
           VR LKR+GD+L IVV AGCCY+IYV++ MREEARKQ
Sbjct: 61  VRTLKRVGDVLTIVVVAGCCYEIYVRATMREEARKQ 96


>ref|XP_002283556.2| PREDICTED: uncharacterized protein LOC100255301 [Vitis vinifera]
           gi|297733832|emb|CBI15079.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score =  118 bits (295), Expect = 1e-24
 Identities = 60/98 (61%), Positives = 76/98 (77%), Gaps = 2/98 (2%)
 Frame = +3

Query: 9   AFLVSKTSFISHSYKSRSQNV--ALFQSTRGYHIEPGTREKALLLEDPIIKRFKSQKRNV 182
           AFL++K + +SH ++S SQ    +   S RG+H+EPG REKALL ++P +KRFKS KRNV
Sbjct: 2   AFLLNKATALSH-FRSHSQKTEDSFSLSRRGFHVEPGPREKALLADNPSLKRFKSHKRNV 60

Query: 183 RGLKRMGDILAIVVAAGCCYQIYVKSVMREEARKQVQA 296
             LKR+GD+L IVV AGCCY+IYVK+VMREEARKQ  A
Sbjct: 61  WRLKRVGDVLTIVVVAGCCYEIYVKAVMREEARKQAAA 98


>ref|XP_004138127.1| PREDICTED: uncharacterized protein LOC101212374 isoform 1 [Cucumis
           sativus]
          Length = 101

 Score =  115 bits (288), Expect = 8e-24
 Identities = 56/98 (57%), Positives = 75/98 (76%)
 Frame = +3

Query: 9   AFLVSKTSFISHSYKSRSQNVALFQSTRGYHIEPGTREKALLLEDPIIKRFKSQKRNVRG 188
           AF ++K++  SH ++S+SQ      S RG+H+EPGTREKALL EDP ++RF+S K+ V  
Sbjct: 2   AFFLNKSTLASH-FRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR 60

Query: 189 LKRMGDILAIVVAAGCCYQIYVKSVMREEARKQVQATS 302
           LKR+GD+L IVV AGCCY+IYVK+ MREEAR+Q +  S
Sbjct: 61  LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAKTGS 98


>ref|XP_004138128.1| PREDICTED: uncharacterized protein LOC101212374 isoform 2 [Cucumis
           sativus]
          Length = 98

 Score =  114 bits (286), Expect = 1e-23
 Identities = 55/95 (57%), Positives = 74/95 (77%)
 Frame = +3

Query: 9   AFLVSKTSFISHSYKSRSQNVALFQSTRGYHIEPGTREKALLLEDPIIKRFKSQKRNVRG 188
           AF ++K++  SH ++S+SQ      S RG+H+EPGTREKALL EDP ++RF+S K+ V  
Sbjct: 2   AFFLNKSTLASH-FRSQSQVDPSSLSRRGFHVEPGTREKALLAEDPCLRRFRSHKKAVSR 60

Query: 189 LKRMGDILAIVVAAGCCYQIYVKSVMREEARKQVQ 293
           LKR+GD+L IVV AGCCY+IYVK+ MREEAR+Q +
Sbjct: 61  LKRVGDVLTIVVVAGCCYEIYVKATMREEARRQAK 95


>ref|XP_002318023.1| predicted protein [Populus trichocarpa] gi|222858696|gb|EEE96243.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  114 bits (285), Expect = 2e-23
 Identities = 56/97 (57%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
 Frame = +3

Query: 15  LVSKTSFISHSYKSRSQNVALFQ-STRGYHIEPGTREKALLLEDPIIKRFKSQKRNVRGL 191
           L+   S I+  Y+S+SQ    F  S RG+H+EPG RE+ALL EDP +KRFKS K++V  L
Sbjct: 21  LLKNYSTITSHYRSQSQTQGAFSLSRRGFHVEPGPREQALLAEDPSLKRFKSHKKSVWRL 80

Query: 192 KRMGDILAIVVAAGCCYQIYVKSVMREEARKQVQATS 302
           KR GD+L +VV AGCCY+IYVK+VMREEARKQ + ++
Sbjct: 81  KRFGDVLTLVVVAGCCYEIYVKTVMREEARKQAKESA 117


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