BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004869
         (1413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514915.1| conserved hypothetical protein [Ricinus comm...   455   e-136
ref|XP_002271442.1| PREDICTED: F-box protein At1g67340-like [Vit...   447   e-134
ref|XP_004135325.1| PREDICTED: F-box protein At1g67340-like [Cuc...   444   e-134
ref|XP_002304680.1| predicted protein [Populus trichocarpa] gi|2...   446   e-134
ref|XP_002297844.1| predicted protein [Populus trichocarpa] gi|2...   444   e-133

>ref|XP_002514915.1| conserved hypothetical protein [Ricinus communis]
            gi|223545966|gb|EEF47469.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 394

 Score =  455 bits (1171), Expect(2) = e-136
 Identities = 217/289 (75%), Positives = 240/289 (83%), Gaps = 4/289 (1%)
 Frame = -2

Query: 1403 NKLDFFDGIPDDLVVSIFCKLSATADCPSDFFNALITCKRFYGLGLHPLVLMKTSPKAFT 1224
            +K DFF  +PDDLV  I CKLS++A CPSDF N L TCKR  GLGL+ +VL K SPK F 
Sbjct: 57   DKTDFFYALPDDLVTCILCKLSSSASCPSDFVNVLATCKRLNGLGLNSIVLSKASPKTFA 116

Query: 1223 AKAKNWSESAHKFLKQCMDAGNIEASYTLGMIRFYSLENRGSGASLMAKAAISSHARALY 1044
             KAKNWS+SAH+FLK C DAGN+EA YTLGMIRFY L+NRGSGASLMAKAAISSHA ALY
Sbjct: 117  LKAKNWSDSAHRFLKLCADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAPALY 176

Query: 1043 SLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAEGRR 864
            SLAVIQFNGSGG+KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQN+AEGRR
Sbjct: 177  SLAVIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNIAEGRR 236

Query: 863  YLVQANARELNSVLGKTSPSSNLGPWSTWHP----NHRNIPGSGCPLLSDYGCNVPAPEP 696
            +LVQANAREL +VL   +   N   W  W+P    NHR+  G GCPLLSD+GCNVPAPE 
Sbjct: 237  FLVQANARELAAVLSNPNSDLNTRAWVNWNPHAHSNHRHASGPGCPLLSDFGCNVPAPEA 296

Query: 695  HPASQFLGDWFELKGGVPGEGLRLCSHDGCGRPETRRHEFRRCSVCGEV 549
            HPAS+F+ DWF  +GG PG+GLRLCSH GCGRPETR+HEFRRCSVCG V
Sbjct: 297  HPASRFMADWFATRGGSPGQGLRLCSHVGCGRPETRKHEFRRCSVCGAV 345



 Score = 59.7 bits (143), Expect(2) = e-136
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = -3

Query: 496 SVCGEVNYCSRACQALDWKMRHKFNCTPVNQ 404
           SVCG VNYCSRACQALDWK+RHK  C PV +
Sbjct: 340 SVCGAVNYCSRACQALDWKLRHKEECAPVER 370


>ref|XP_002271442.1| PREDICTED: F-box protein At1g67340-like [Vitis vinifera]
          Length = 385

 Score =  447 bits (1151), Expect(2) = e-134
 Identities = 216/290 (74%), Positives = 242/290 (83%), Gaps = 2/290 (0%)
 Frame = -2

Query: 1412 QEVNKLDFFDGIPDDLVVSIFCKLSATADCPSDFFNALITCKRFYGLGLHPLVLMKTSPK 1233
            +   K DFF+ +PDDLV+ I  KLS++A CPSDF N L+TCKRF GLGLH LVL + S K
Sbjct: 44   ESAGKSDFFEALPDDLVICILSKLSSSAGCPSDFINVLLTCKRFNGLGLHSLVLSRASSK 103

Query: 1232 AFTAKAKNWSESAHKFLKQCMDAGNIEASYTLGMIRFYSLENRGSGASLMAKAAISSHAR 1053
            +   +AKNWSESA +FLK C DAGN+EA YTLGMIRFY L+NR SGASLMAKAAISSHA 
Sbjct: 104  SLAVRAKNWSESALRFLKLCADAGNVEACYTLGMIRFYCLQNRVSGASLMAKAAISSHAP 163

Query: 1052 ALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAE 873
            ALYSLAVIQFNGS G+KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAE
Sbjct: 164  ALYSLAVIQFNGSVGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAE 223

Query: 872  GRRYLVQANARELNSVLGKTSPSSNLGPWSTWHP--NHRNIPGSGCPLLSDYGCNVPAPE 699
            GRR+LVQANAREL +VL   S + +   W TW+P  +HR++ GSGCPLLSD+GCNVPAPE
Sbjct: 224  GRRFLVQANARELAAVLSSASSAVSSRSWLTWNPHQHHRHVTGSGCPLLSDFGCNVPAPE 283

Query: 698  PHPASQFLGDWFELKGGVPGEGLRLCSHDGCGRPETRRHEFRRCSVCGEV 549
             HPAS+FL +WF  +GGVPG GLRLCSH GCGRPE RRHEFRRCSVCG V
Sbjct: 284  AHPASRFLAEWFAARGGVPGPGLRLCSHAGCGRPEMRRHEFRRCSVCGIV 333



 Score = 58.5 bits (140), Expect(2) = e-134
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = -3

Query: 496 SVCGEVNYCSRACQALDWKMRHKFNCTPVNQ 404
           SVCG VNYCSRACQALDWK+RHK  C PV +
Sbjct: 328 SVCGIVNYCSRACQALDWKLRHKAACAPVER 358


>ref|XP_004135325.1| PREDICTED: F-box protein At1g67340-like [Cucumis sativus]
            gi|449494931|ref|XP_004159686.1| PREDICTED: F-box protein
            At1g67340-like [Cucumis sativus]
          Length = 382

 Score =  444 bits (1143), Expect(2) = e-134
 Identities = 212/287 (73%), Positives = 239/287 (83%), Gaps = 5/287 (1%)
 Frame = -2

Query: 1394 DFFDGIPDDLVVSIFCKLSATADCPSDFFNALITCKRFYGLGLHPLVLMKTSPKAFTAKA 1215
            D FD +PDDLV++I   LS+ A  PSDF N L+TCKR   LGL+P+VL + S K F  +A
Sbjct: 51   DLFDSLPDDLVITILSNLSSAASSPSDFINILLTCKRLNNLGLNPMVLSRASQKTFAIRA 110

Query: 1214 KNWSESAHKFLKQCMDAGNIEASYTLGMIRFYSLENRGSGASLMAKAAISSHARALYSLA 1035
            KNW+ESAH+FLKQC DAGN+EA YTLGMIRFY L+NRGSGASLMAKAAI SHA ALYSLA
Sbjct: 111  KNWTESAHRFLKQCSDAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAICSHAPALYSLA 170

Query: 1034 VIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAEGRRYLV 855
            VIQFNGSGG+KNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQN+ EGRR+LV
Sbjct: 171  VIQFNGSGGSKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNITEGRRFLV 230

Query: 854  QANARELNSVLGKTSPSS-----NLGPWSTWHPNHRNIPGSGCPLLSDYGCNVPAPEPHP 690
            QANAREL +VL   + SS     +   W+T  P+HR++ GSGCPLLSD+GCN+PAPE HP
Sbjct: 231  QANARELAAVLSSEAASSVAASRSCLTWNTQPPHHRHVTGSGCPLLSDFGCNIPAPEAHP 290

Query: 689  ASQFLGDWFELKGGVPGEGLRLCSHDGCGRPETRRHEFRRCSVCGEV 549
            ASQFL +WFE +GG PG GLRLCSH GCGRPETRRHEFRRCSVCG V
Sbjct: 291  ASQFLAEWFEARGGSPGNGLRLCSHVGCGRPETRRHEFRRCSVCGAV 337



 Score = 61.2 bits (147), Expect(2) = e-134
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = -3

Query: 496 SVCGEVNYCSRACQALDWKMRHKFNCTPVNQ 404
           SVCG VNYCSRACQALDWK+RHK +C PV +
Sbjct: 332 SVCGAVNYCSRACQALDWKLRHKIDCAPVER 362


>ref|XP_002304680.1| predicted protein [Populus trichocarpa] gi|222842112|gb|EEE79659.1|
            predicted protein [Populus trichocarpa]
          Length = 403

 Score =  446 bits (1146), Expect(2) = e-134
 Identities = 216/295 (73%), Positives = 242/295 (82%), Gaps = 7/295 (2%)
 Frame = -2

Query: 1412 QEVNKLDFFDGIPDDLVVSIFCKLSATADCPSDFFNALITCKRFYGLGLHPLVLMKTSPK 1233
            Q+  + D FD +PDDLV+SI CKLS++A CPSDF N L+TCKR  GLGLH LVL K SPK
Sbjct: 56   QKTGETDLFDSLPDDLVISILCKLSSSASCPSDFINVLLTCKRLNGLGLHSLVLSKASPK 115

Query: 1232 AFTAKAKNWSESAHKFLKQCMDAGNIEASYTLGMIRFYSLENRGSGASLMAKAAISSHAR 1053
             F  KAKNWS+SAH+FLK   DAGN+EA YTLGMIRFY L+NRGSGASLMAKAAISS+A 
Sbjct: 116  TFAVKAKNWSDSAHRFLKLFADAGNVEACYTLGMIRFYCLQNRGSGASLMAKAAISSYAP 175

Query: 1052 ALYSLAVIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAE 873
            ALYSLAVIQFNGSGG+K+DKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNV E
Sbjct: 176  ALYSLAVIQFNGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVTE 235

Query: 872  GRRYLVQANARELNSVLGKTSPSSNLGPWSTW----HPNHRNIPG---SGCPLLSDYGCN 714
            GRR+LVQANAREL +VL K +       W +W    HPNHR+  G   SGCPLLSD+GCN
Sbjct: 236  GRRFLVQANARELAAVLSKHNSGFPTRTWFSWNPHAHPNHRHPTGNGPSGCPLLSDFGCN 295

Query: 713  VPAPEPHPASQFLGDWFELKGGVPGEGLRLCSHDGCGRPETRRHEFRRCSVCGEV 549
            VPAPE HPAS+F+ +WF ++GG  G GLRLCSH GCGR ETR+HEFRRCSVCG V
Sbjct: 296  VPAPESHPASRFMTEWFAIRGGSSGSGLRLCSHTGCGRSETRKHEFRRCSVCGAV 350



 Score = 59.7 bits (143), Expect(2) = e-134
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = -3

Query: 496 SVCGEVNYCSRACQALDWKMRHKFNCTPVNQ 404
           SVCG VNYCSRACQALDWK+RHK  C PV +
Sbjct: 345 SVCGAVNYCSRACQALDWKLRHKEGCAPVER 375


>ref|XP_002297844.1| predicted protein [Populus trichocarpa] gi|222845102|gb|EEE82649.1|
            predicted protein [Populus trichocarpa]
          Length = 403

 Score =  444 bits (1143), Expect(2) = e-133
 Identities = 217/290 (74%), Positives = 238/290 (82%), Gaps = 8/290 (2%)
 Frame = -2

Query: 1394 DFFDGIPDDLVVSIFCKLSATADCPSDFFNALITCKRFYGLGLHPLVLMKTSPKAFTAKA 1215
            D F+ +PDDLV+SI CKLS++A CPSDF N LITC+R  GLGLH LVL K SPK+F  KA
Sbjct: 63   DLFESLPDDLVISILCKLSSSASCPSDFINVLITCRRLNGLGLHSLVLSKASPKSFAIKA 122

Query: 1214 KNWSESAHKFLKQCMDAGNIEASYTLGMIRFYSLENRGSGASLMAKAAISSHARALYSLA 1035
             NWS+SAH+FLK C DAGN EA YTLGMIRFY L+NRGSGASLMAKAAISSHA ALYSLA
Sbjct: 123  NNWSDSAHRFLKLCADAGNAEACYTLGMIRFYCLQNRGSGASLMAKAAISSHAPALYSLA 182

Query: 1034 VIQFNGSGGTKNDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVAEGRRYLV 855
            VIQFNGSGG+K+DKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNV EGRR+LV
Sbjct: 183  VIQFNGSGGSKSDKDLRAGVALCARAAFLGHIDALRELGHCLQDGYGVRQNVTEGRRFLV 242

Query: 854  QANARELNSVLGKTSPSSNLGPWSTW----HPNHR----NIPGSGCPLLSDYGCNVPAPE 699
            QANAREL +VL           W TW    HPNHR    N P SGCPLLSD+GCNVPAPE
Sbjct: 243  QANARELAAVLSNPDSGLPTRAWLTWNPHAHPNHRHPSENGP-SGCPLLSDFGCNVPAPE 301

Query: 698  PHPASQFLGDWFELKGGVPGEGLRLCSHDGCGRPETRRHEFRRCSVCGEV 549
             HPAS+F+ +WF ++GG  G GLRLCSH GCGRPETR+HEFRRCSVCG V
Sbjct: 302  AHPASRFMTEWFAIRGGSAGSGLRLCSHTGCGRPETRKHEFRRCSVCGAV 351



 Score = 59.7 bits (143), Expect(2) = e-133
 Identities = 24/31 (77%), Positives = 26/31 (83%)
 Frame = -3

Query: 496 SVCGEVNYCSRACQALDWKMRHKFNCTPVNQ 404
           SVCG VNYCSRACQALDWK+RHK  C PV +
Sbjct: 346 SVCGAVNYCSRACQALDWKLRHKEECAPVER 376