BLASTX nr result
ID: Coptis24_contig00004868
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004868 (2127 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277395.2| PREDICTED: bifunctional 3-dehydroquinate deh... 717 0.0 gb|AAW65140.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrog... 706 0.0 emb|CBI26126.3| unnamed protein product [Vitis vinifera] 697 0.0 ref|XP_002314474.1| dehydroquinate dehydratase/ shikimate dehydr... 689 0.0 gb|AFO68799.1| shikimate dehydrogenase, partial [Pachysandra ter... 687 0.0 >ref|XP_002277395.2| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Vitis vinifera] Length = 522 Score = 717 bits (1850), Expect = 0.0 Identities = 360/512 (70%), Positives = 424/512 (82%), Gaps = 6/512 (1%) Frame = -2 Query: 1871 NKTLVCAPLMGETVEEMLVMMKTAKTSGADIVEIRLDYLKCFLPSHDLEILIKNCPLPTL 1692 N TL+C P+MGET+E+M+V M AKTSGAD+VE+RLD LK F P DLE+LI+ CPLPTL Sbjct: 9 NSTLICVPIMGETIEKMVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRKCPLPTL 68 Query: 1691 FTYRPKWEGGRYEGDEIVRLNALQLAMELGADYVDVELKVAPDFIKSIHGKKPENFKLIV 1512 FTYRPKWEGG+YEGDE R +AL+LAMELGADYVD+ELKVA +FI SIHG+KPE FK+IV Sbjct: 69 FTYRPKWEGGQYEGDENSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPEKFKVIV 128 Query: 1511 SSHNYQKTPSVEDIRDLVARIQGTGADIVKIATTAVDISDVARVLQITKNSQ---VPIIA 1341 SSHNYQ TPSVED+ +LV IQ TGADIVKIATTA++I+DVAR+ QIT +SQ VP+I Sbjct: 129 SSHNYQNTPSVEDLGNLVVSIQATGADIVKIATTALEITDVARIFQITVHSQVSSVPVIG 188 Query: 1340 LVMTERGLMSRILCPKYGGYLTFGTLEAGKVSAPGQPTVDNLLNLFNFRQIGPNTKIVGL 1161 LVM ERGL+SRILCPK+ GYLTFG+LE G VSAPGQPT+ +LLNL+NFRQ+GP+TK+ G+ Sbjct: 189 LVMGERGLISRILCPKFSGYLTFGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPDTKVFGV 248 Query: 1160 IGNPVGHSKGPFLFNKAFKEVGFDGVYLPFLVDDIEKFLKTYASSPDFAGFSCTIPHKEE 981 IG PV HSK P L+N+AFK VGF+GVY+ LVDDI KF TY S+ DFAGFSCTIPHKE Sbjct: 249 IGKPVSHSKSPHLYNEAFKSVGFNGVYVHLLVDDIAKFFHTY-SAADFAGFSCTIPHKEA 307 Query: 980 ALRCCDEVDPVAKSIGAVNTIVRRPSDGKLIGYNTDYVGAISAIEIGLGGSH---NGTAS 810 AL+CCDEV PVAKSIGAVN I+RRPSDGKL GYNTDYVGAISAIE GL H + + S Sbjct: 308 ALKCCDEVSPVAKSIGAVNCIIRRPSDGKLFGYNTDYVGAISAIEDGLRDLHKISSTSGS 367 Query: 809 PLAGKLFVVIXXXXXXXXXXXXXXXXXARVLIANRTYSRARELADLVGGDAITLDELNKY 630 PLAGKLFVVI ARV+IANRTY+RARELAD VGGDA++L +LN + Sbjct: 368 PLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYARARELADAVGGDALSLADLNNF 427 Query: 629 HPEDGMILANTTSIGMQPKVNETPVAKEALSGYTLVFDAVYTPKMTRLLLDAEEAGCTVV 450 HPE+GMILANTTSIGMQPKV+ETP++K AL Y+LVFDA+YTPK+TRLL +A+E+G T+V Sbjct: 428 HPENGMILANTTSIGMQPKVDETPISKHALKYYSLVFDAIYTPKITRLLREAQESGATIV 487 Query: 449 TGLNMFVIQAYEQYERFTGLPAPKELFWELMS 354 TGL MF+ QAYEQ+ERFTGLPAPKELF + +S Sbjct: 488 TGLEMFIGQAYEQFERFTGLPAPKELFKQFIS 519 >gb|AAW65140.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Juglans regia] Length = 508 Score = 706 bits (1823), Expect = 0.0 Identities = 354/507 (69%), Positives = 423/507 (83%), Gaps = 3/507 (0%) Frame = -2 Query: 1865 TLVCAPLMGETVEEMLVMMKTAKTSGADIVEIRLDYLKCFLPSHDLEILIKNCPLPTLFT 1686 TLVCAP+M E+V++M++ M AK AD+VEIRLD LK F PS+DL+ +IK PLPTLFT Sbjct: 1 TLVCAPIMAESVDKMVINMNKAKQGDADLVEIRLDSLKSFNPSNDLKTIIKASPLPTLFT 60 Query: 1685 YRPKWEGGRYEGDEIVRLNALQLAMELGADYVDVELKVAPDFIKSIHGKKPENFKLIVSS 1506 YRPKWEGG+Y+GDE RL+AL+LAME GADY+DVEL+VA +F SI+G+KPEN K+IVSS Sbjct: 61 YRPKWEGGQYDGDEKKRLDALRLAMEFGADYIDVELQVACEFNDSIYGRKPENSKVIVSS 120 Query: 1505 HNYQKTPSVEDIRDLVARIQGTGADIVKIATTAVDISDVARVLQITKNSQVPIIALVMTE 1326 HNYQ TPS ED+ +LVARIQ TGADIVKIATTA++I+DVAR+ QIT +SQVPII +VM E Sbjct: 121 HNYQDTPSAEDLGNLVARIQATGADIVKIATTALEIADVARIFQITVHSQVPIIGIVMGE 180 Query: 1325 RGLMSRILCPKYGGYLTFGTLEAGKVSAPGQPTVDNLLNLFNFRQIGPNTKIVGLIGNPV 1146 RG MSRILCPK+GG+LTFGT+E+G VSAPGQPT+ +LL+L+N R+IGP+TK+ G+IG PV Sbjct: 181 RGFMSRILCPKFGGFLTFGTIESGIVSAPGQPTMKDLLHLYNLRRIGPDTKVFGIIGKPV 240 Query: 1145 GHSKGPFLFNKAFKEVGFDGVYLPFLVDDIEKFLKTYASSPDFAGFSCTIPHKEEALRCC 966 HSK P L+N+AFK V F+GVY+P LVDDI FL+TY SS DFAGFSCTIPHKE AL+CC Sbjct: 241 HHSKSPILYNEAFKSVCFNGVYIPLLVDDIANFLQTY-SSTDFAGFSCTIPHKEAALKCC 299 Query: 965 DEVDPVAKSIGAVNTIVRRPSDGKLIGYNTDYVGAISAIEIGLGGSHNGT---ASPLAGK 795 DEVDPVAKSIGAVN I+RRP+DGKL+GYNTDYVGAISAIE GL GSHN + SPLAGK Sbjct: 300 DEVDPVAKSIGAVNCIIRRPTDGKLVGYNTDYVGAISAIEDGLRGSHNSSNTADSPLAGK 359 Query: 794 LFVVIXXXXXXXXXXXXXXXXXARVLIANRTYSRARELADLVGGDAITLDELNKYHPEDG 615 LFVVI ARV+IANRTY RARELAD +GGDA++L +L+ +HPEDG Sbjct: 360 LFVVIGAGGAGKALAYGAKEKGARVVIANRTYDRARELADTIGGDALSLADLDNFHPEDG 419 Query: 614 MILANTTSIGMQPKVNETPVAKEALSGYTLVFDAVYTPKMTRLLLDAEEAGCTVVTGLNM 435 MILAN+TSIGMQPKV+ETP+ K AL Y+LVFDAVYTPKMTRLL +AEE+G +VTGL M Sbjct: 420 MILANSTSIGMQPKVDETPIPKHALRSYSLVFDAVYTPKMTRLLREAEESGAKIVTGLEM 479 Query: 434 FVIQAYEQYERFTGLPAPKELFWELMS 354 F+ QAYEQ+ERFTGLPAPKELF ++M+ Sbjct: 480 FIGQAYEQFERFTGLPAPKELFRKVMA 506 >emb|CBI26126.3| unnamed protein product [Vitis vinifera] Length = 495 Score = 697 bits (1798), Expect = 0.0 Identities = 350/493 (70%), Positives = 410/493 (83%), Gaps = 3/493 (0%) Frame = -2 Query: 1823 MLVMMKTAKTSGADIVEIRLDYLKCFLPSHDLEILIKNCPLPTLFTYRPKWEGGRYEGDE 1644 M+V M AKTSGAD+VE+RLD LK F P DLE+LI+ CPLPTLFTYRPKWEGG+YEGDE Sbjct: 1 MVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRKCPLPTLFTYRPKWEGGQYEGDE 60 Query: 1643 IVRLNALQLAMELGADYVDVELKVAPDFIKSIHGKKPENFKLIVSSHNYQKTPSVEDIRD 1464 R +AL+LAMELGADYVD+ELKVA +FI SIHG+KPE FK+IVSSHNYQ TPSVED+ + Sbjct: 61 NSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPEKFKVIVSSHNYQNTPSVEDLGN 120 Query: 1463 LVARIQGTGADIVKIATTAVDISDVARVLQITKNSQVPIIALVMTERGLMSRILCPKYGG 1284 LV IQ TGADIVKIATTA++I+DVAR+ QIT +SQVP+I LVM ERGL+SRILCPK+ G Sbjct: 121 LVVSIQATGADIVKIATTALEITDVARIFQITVHSQVPVIGLVMGERGLISRILCPKFSG 180 Query: 1283 YLTFGTLEAGKVSAPGQPTVDNLLNLFNFRQIGPNTKIVGLIGNPVGHSKGPFLFNKAFK 1104 YLTFG+LE G VSAPGQPT+ +LLNL+NFRQ+GP+TK+ G+IG PV HSK P L+N+AFK Sbjct: 181 YLTFGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPDTKVFGVIGKPVSHSKSPHLYNEAFK 240 Query: 1103 EVGFDGVYLPFLVDDIEKFLKTYASSPDFAGFSCTIPHKEEALRCCDEVDPVAKSIGAVN 924 VGF+GVY+ LVDDI KF TY S+ DFAGFSCTIPHKE AL+CCDEV PVAKSIGAVN Sbjct: 241 SVGFNGVYVHLLVDDIAKFFHTY-SAADFAGFSCTIPHKEAALKCCDEVSPVAKSIGAVN 299 Query: 923 TIVRRPSDGKLIGYNTDYVGAISAIEIGLGGSH---NGTASPLAGKLFVVIXXXXXXXXX 753 I+RRPSDGKL GYNTDYVGAISAIE GL H + + SPLAGKLFVVI Sbjct: 300 CIIRRPSDGKLFGYNTDYVGAISAIEDGLRDLHKISSTSGSPLAGKLFVVIGAGGAGKAL 359 Query: 752 XXXXXXXXARVLIANRTYSRARELADLVGGDAITLDELNKYHPEDGMILANTTSIGMQPK 573 ARV+IANRTY+RARELAD VGGDA++L +LN +HPE+GMILANTTSIGMQPK Sbjct: 360 AYGAKEKGARVVIANRTYARARELADAVGGDALSLADLNNFHPENGMILANTTSIGMQPK 419 Query: 572 VNETPVAKEALSGYTLVFDAVYTPKMTRLLLDAEEAGCTVVTGLNMFVIQAYEQYERFTG 393 V+ETP++K AL Y+LVFDA+YTPK+TRLL +A+E+G T+VTGL MF+ QAYEQ+ERFTG Sbjct: 420 VDETPISKHALKYYSLVFDAIYTPKITRLLREAQESGATIVTGLEMFIGQAYEQFERFTG 479 Query: 392 LPAPKELFWELMS 354 LPAPKELF + +S Sbjct: 480 LPAPKELFKQFIS 492 >ref|XP_002314474.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus trichocarpa] gi|222863514|gb|EEF00645.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus trichocarpa] Length = 538 Score = 689 bits (1777), Expect = 0.0 Identities = 350/511 (68%), Positives = 414/511 (81%), Gaps = 3/511 (0%) Frame = -2 Query: 1871 NKTLVCAPLMGETVEEMLVMMKTAKTSGADIVEIRLDYLKCFLPSHDLEILIKNCPLPTL 1692 N TL+C P+M ++V++M ++M AK+ GAD+VEIRLD LK F P+ D++ LI + PLPTL Sbjct: 29 NPTLICTPIMADSVDKMAILMAEAKSVGADLVEIRLDSLKDFNPNSDIKTLILHSPLPTL 88 Query: 1691 FTYRPKWEGGRYEGDEIVRLNALQLAMELGADYVDVELKVAPDFIKSIHGKKPENFKLIV 1512 FTYRP WEGG+Y GDE RL+AL+LAMELGADY+DVELKVA +F + + G KP KLIV Sbjct: 89 FTYRPMWEGGQYNGDEKPRLDALRLAMELGADYIDVELKVAHEFNELLRGNKPGKCKLIV 148 Query: 1511 SSHNYQKTPSVEDIRDLVARIQGTGADIVKIATTAVDISDVARVLQITKNSQVPIIALVM 1332 SSHNY+ TPSVE++ +LVARIQ GADIVKIATTA+DISDVAR+ QIT +SQVPII LVM Sbjct: 149 SSHNYENTPSVEELGNLVARIQAAGADIVKIATTALDISDVARIFQITVHSQVPIIGLVM 208 Query: 1331 TERGLMSRILCPKYGGYLTFGTLEAGKVSAPGQPTVDNLLNLFNFRQIGPNTKIVGLIGN 1152 ERGL+SRILC K+GGYLTFGTLE+G VSAPGQPT+ +LL+L+NFR IGP+TK+ G+IG Sbjct: 209 GERGLISRILCAKFGGYLTFGTLESGVVSAPGQPTIKDLLDLYNFRLIGPDTKVFGIIGK 268 Query: 1151 PVGHSKGPFLFNKAFKEVGFDGVYLPFLVDDIEKFLKTYASSPDFAGFSCTIPHKEEALR 972 PVGHSK P LFN+AFK VG +GVY+ LVDDI +FL+TY SS DFAGFSCTIPHKE+A + Sbjct: 269 PVGHSKSPVLFNEAFKSVGINGVYVHLLVDDIARFLQTY-SSTDFAGFSCTIPHKEDAAK 327 Query: 971 CCDEVDPVAKSIGAVNTIVRRPSDGKLIGYNTDYVGAISAIEIGLGGSH---NGTASPLA 801 CCDEV PVAKSIGAVN I+RR +DGKL GYNTDYVGAISAIE GL S N SPLA Sbjct: 328 CCDEVHPVAKSIGAVNCIIRRQNDGKLFGYNTDYVGAISAIEEGLRASQNVSNTVGSPLA 387 Query: 800 GKLFVVIXXXXXXXXXXXXXXXXXARVLIANRTYSRARELADLVGGDAITLDELNKYHPE 621 GKLFVVI ARV+IANRTY RA+ LAD++GGDAITL +L +HPE Sbjct: 388 GKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKVLADIIGGDAITLADLENFHPE 447 Query: 620 DGMILANTTSIGMQPKVNETPVAKEALSGYTLVFDAVYTPKMTRLLLDAEEAGCTVVTGL 441 DGMILANTTSIGMQPKV+ETPV+K AL Y+LVFDAVYTPK+TRLL +AEE+G +VTGL Sbjct: 448 DGMILANTTSIGMQPKVDETPVSKNALRSYSLVFDAVYTPKITRLLREAEESGAKIVTGL 507 Query: 440 NMFVIQAYEQYERFTGLPAPKELFWELMSGY 348 MF+ QAYEQ+ERFT LPAPKELF ++MS Y Sbjct: 508 EMFIGQAYEQFERFTELPAPKELFQKIMSKY 538 >gb|AFO68799.1| shikimate dehydrogenase, partial [Pachysandra terminalis] Length = 490 Score = 687 bits (1772), Expect = 0.0 Identities = 347/498 (69%), Positives = 408/498 (81%) Frame = -2 Query: 1862 LVCAPLMGETVEEMLVMMKTAKTSGADIVEIRLDYLKCFLPSHDLEILIKNCPLPTLFTY 1683 L+CAP+MGE+V++ML+ M+ AK GAD+VE+RLDY+K F P DL+ LI+ CPLPTL TY Sbjct: 1 LICAPVMGESVDDMLMEMRKAKEYGADLVEVRLDYIKNFSPRKDLDTLIRECPLPTLITY 60 Query: 1682 RPKWEGGRYEGDEIVRLNALQLAMELGADYVDVELKVAPDFIKSIHGKKPENFKLIVSSH 1503 RPKWEGG YEGDE RL+AL++AMELG DY+D+EL+VA +FI S+H KKPE FK+IVSSH Sbjct: 61 RPKWEGGLYEGDENKRLDALRVAMELGVDYIDIELQVAHEFIHSVHAKKPEKFKIIVSSH 120 Query: 1502 NYQKTPSVEDIRDLVARIQGTGADIVKIATTAVDISDVARVLQITKNSQVPIIALVMTER 1323 NYQ TPSVEDI DLVARIQ TGADIVKIATTA++I+DVAR+ QI +SQVPII LVM ER Sbjct: 121 NYQSTPSVEDIGDLVARIQATGADIVKIATTALEITDVARMFQIIVHSQVPIIGLVMGER 180 Query: 1322 GLMSRILCPKYGGYLTFGTLEAGKVSAPGQPTVDNLLNLFNFRQIGPNTKIVGLIGNPVG 1143 GLMSR+LCPK+GGYLTFG +EAGK+SAPGQPT+ +LL+ +NFRQIGP+TK+ G+IG PV Sbjct: 181 GLMSRLLCPKFGGYLTFGAIEAGKLSAPGQPTIKDLLDKYNFRQIGPDTKVFGVIGKPVS 240 Query: 1142 HSKGPFLFNKAFKEVGFDGVYLPFLVDDIEKFLKTYASSPDFAGFSCTIPHKEEALRCCD 963 SK P L+N AFK +G++GVY+ FLVDDI KFLKTY SPDFAGFSCT+PHKE AL D Sbjct: 241 QSKSPLLYNNAFKSIGYNGVYVQFLVDDIAKFLKTY-PSPDFAGFSCTMPHKEAALEYLD 299 Query: 962 EVDPVAKSIGAVNTIVRRPSDGKLIGYNTDYVGAISAIEIGLGGSHNGTASPLAGKLFVV 783 E+DP+AK IGAVN IVRR SDGKL GYNTDY GAISAIE GL S LAGKLFVV Sbjct: 300 EIDPIAKLIGAVNCIVRR-SDGKLSGYNTDYFGAISAIEDGL-------RSLLAGKLFVV 351 Query: 782 IXXXXXXXXXXXXXXXXXARVLIANRTYSRARELADLVGGDAITLDELNKYHPEDGMILA 603 I ARV+IANRT+ RA +LAD+VGG AI+L EL+ +HPEDGM+LA Sbjct: 352 IGAGGAGKALAFGAKEKGARVVIANRTFDRASKLADIVGGQAISLMELDNFHPEDGMVLA 411 Query: 602 NTTSIGMQPKVNETPVAKEALSGYTLVFDAVYTPKMTRLLLDAEEAGCTVVTGLNMFVIQ 423 NTTSIGMQPKV+ETP+ K+ALS Y+LVFDAVYTPK+TRLL +AEE G TVV+GL MF+ Q Sbjct: 412 NTTSIGMQPKVDETPIPKKALSNYSLVFDAVYTPKLTRLLREAEECGATVVSGLEMFIRQ 471 Query: 422 AYEQYERFTGLPAPKELF 369 AYEQYERFTGLPAPKELF Sbjct: 472 AYEQYERFTGLPAPKELF 489