BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004868
         (2127 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277395.2| PREDICTED: bifunctional 3-dehydroquinate deh...   717   0.0  
gb|AAW65140.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrog...   706   0.0  
emb|CBI26126.3| unnamed protein product [Vitis vinifera]              697   0.0  
ref|XP_002314474.1| dehydroquinate dehydratase/ shikimate dehydr...   689   0.0  
gb|AFO68799.1| shikimate dehydrogenase, partial [Pachysandra ter...   687   0.0  

>ref|XP_002277395.2| PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate
            dehydrogenase, chloroplastic-like [Vitis vinifera]
          Length = 522

 Score =  717 bits (1850), Expect = 0.0
 Identities = 360/512 (70%), Positives = 424/512 (82%), Gaps = 6/512 (1%)
 Frame = -2

Query: 1871 NKTLVCAPLMGETVEEMLVMMKTAKTSGADIVEIRLDYLKCFLPSHDLEILIKNCPLPTL 1692
            N TL+C P+MGET+E+M+V M  AKTSGAD+VE+RLD LK F P  DLE+LI+ CPLPTL
Sbjct: 9    NSTLICVPIMGETIEKMVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRKCPLPTL 68

Query: 1691 FTYRPKWEGGRYEGDEIVRLNALQLAMELGADYVDVELKVAPDFIKSIHGKKPENFKLIV 1512
            FTYRPKWEGG+YEGDE  R +AL+LAMELGADYVD+ELKVA +FI SIHG+KPE FK+IV
Sbjct: 69   FTYRPKWEGGQYEGDENSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPEKFKVIV 128

Query: 1511 SSHNYQKTPSVEDIRDLVARIQGTGADIVKIATTAVDISDVARVLQITKNSQ---VPIIA 1341
            SSHNYQ TPSVED+ +LV  IQ TGADIVKIATTA++I+DVAR+ QIT +SQ   VP+I 
Sbjct: 129  SSHNYQNTPSVEDLGNLVVSIQATGADIVKIATTALEITDVARIFQITVHSQVSSVPVIG 188

Query: 1340 LVMTERGLMSRILCPKYGGYLTFGTLEAGKVSAPGQPTVDNLLNLFNFRQIGPNTKIVGL 1161
            LVM ERGL+SRILCPK+ GYLTFG+LE G VSAPGQPT+ +LLNL+NFRQ+GP+TK+ G+
Sbjct: 189  LVMGERGLISRILCPKFSGYLTFGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPDTKVFGV 248

Query: 1160 IGNPVGHSKGPFLFNKAFKEVGFDGVYLPFLVDDIEKFLKTYASSPDFAGFSCTIPHKEE 981
            IG PV HSK P L+N+AFK VGF+GVY+  LVDDI KF  TY S+ DFAGFSCTIPHKE 
Sbjct: 249  IGKPVSHSKSPHLYNEAFKSVGFNGVYVHLLVDDIAKFFHTY-SAADFAGFSCTIPHKEA 307

Query: 980  ALRCCDEVDPVAKSIGAVNTIVRRPSDGKLIGYNTDYVGAISAIEIGLGGSH---NGTAS 810
            AL+CCDEV PVAKSIGAVN I+RRPSDGKL GYNTDYVGAISAIE GL   H   + + S
Sbjct: 308  ALKCCDEVSPVAKSIGAVNCIIRRPSDGKLFGYNTDYVGAISAIEDGLRDLHKISSTSGS 367

Query: 809  PLAGKLFVVIXXXXXXXXXXXXXXXXXARVLIANRTYSRARELADLVGGDAITLDELNKY 630
            PLAGKLFVVI                 ARV+IANRTY+RARELAD VGGDA++L +LN +
Sbjct: 368  PLAGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYARARELADAVGGDALSLADLNNF 427

Query: 629  HPEDGMILANTTSIGMQPKVNETPVAKEALSGYTLVFDAVYTPKMTRLLLDAEEAGCTVV 450
            HPE+GMILANTTSIGMQPKV+ETP++K AL  Y+LVFDA+YTPK+TRLL +A+E+G T+V
Sbjct: 428  HPENGMILANTTSIGMQPKVDETPISKHALKYYSLVFDAIYTPKITRLLREAQESGATIV 487

Query: 449  TGLNMFVIQAYEQYERFTGLPAPKELFWELMS 354
            TGL MF+ QAYEQ+ERFTGLPAPKELF + +S
Sbjct: 488  TGLEMFIGQAYEQFERFTGLPAPKELFKQFIS 519


>gb|AAW65140.1| 3-dehydroquinate dehydratase/shikimate 5-dehydrogenase [Juglans
            regia]
          Length = 508

 Score =  706 bits (1823), Expect = 0.0
 Identities = 354/507 (69%), Positives = 423/507 (83%), Gaps = 3/507 (0%)
 Frame = -2

Query: 1865 TLVCAPLMGETVEEMLVMMKTAKTSGADIVEIRLDYLKCFLPSHDLEILIKNCPLPTLFT 1686
            TLVCAP+M E+V++M++ M  AK   AD+VEIRLD LK F PS+DL+ +IK  PLPTLFT
Sbjct: 1    TLVCAPIMAESVDKMVINMNKAKQGDADLVEIRLDSLKSFNPSNDLKTIIKASPLPTLFT 60

Query: 1685 YRPKWEGGRYEGDEIVRLNALQLAMELGADYVDVELKVAPDFIKSIHGKKPENFKLIVSS 1506
            YRPKWEGG+Y+GDE  RL+AL+LAME GADY+DVEL+VA +F  SI+G+KPEN K+IVSS
Sbjct: 61   YRPKWEGGQYDGDEKKRLDALRLAMEFGADYIDVELQVACEFNDSIYGRKPENSKVIVSS 120

Query: 1505 HNYQKTPSVEDIRDLVARIQGTGADIVKIATTAVDISDVARVLQITKNSQVPIIALVMTE 1326
            HNYQ TPS ED+ +LVARIQ TGADIVKIATTA++I+DVAR+ QIT +SQVPII +VM E
Sbjct: 121  HNYQDTPSAEDLGNLVARIQATGADIVKIATTALEIADVARIFQITVHSQVPIIGIVMGE 180

Query: 1325 RGLMSRILCPKYGGYLTFGTLEAGKVSAPGQPTVDNLLNLFNFRQIGPNTKIVGLIGNPV 1146
            RG MSRILCPK+GG+LTFGT+E+G VSAPGQPT+ +LL+L+N R+IGP+TK+ G+IG PV
Sbjct: 181  RGFMSRILCPKFGGFLTFGTIESGIVSAPGQPTMKDLLHLYNLRRIGPDTKVFGIIGKPV 240

Query: 1145 GHSKGPFLFNKAFKEVGFDGVYLPFLVDDIEKFLKTYASSPDFAGFSCTIPHKEEALRCC 966
             HSK P L+N+AFK V F+GVY+P LVDDI  FL+TY SS DFAGFSCTIPHKE AL+CC
Sbjct: 241  HHSKSPILYNEAFKSVCFNGVYIPLLVDDIANFLQTY-SSTDFAGFSCTIPHKEAALKCC 299

Query: 965  DEVDPVAKSIGAVNTIVRRPSDGKLIGYNTDYVGAISAIEIGLGGSHNGT---ASPLAGK 795
            DEVDPVAKSIGAVN I+RRP+DGKL+GYNTDYVGAISAIE GL GSHN +    SPLAGK
Sbjct: 300  DEVDPVAKSIGAVNCIIRRPTDGKLVGYNTDYVGAISAIEDGLRGSHNSSNTADSPLAGK 359

Query: 794  LFVVIXXXXXXXXXXXXXXXXXARVLIANRTYSRARELADLVGGDAITLDELNKYHPEDG 615
            LFVVI                 ARV+IANRTY RARELAD +GGDA++L +L+ +HPEDG
Sbjct: 360  LFVVIGAGGAGKALAYGAKEKGARVVIANRTYDRARELADTIGGDALSLADLDNFHPEDG 419

Query: 614  MILANTTSIGMQPKVNETPVAKEALSGYTLVFDAVYTPKMTRLLLDAEEAGCTVVTGLNM 435
            MILAN+TSIGMQPKV+ETP+ K AL  Y+LVFDAVYTPKMTRLL +AEE+G  +VTGL M
Sbjct: 420  MILANSTSIGMQPKVDETPIPKHALRSYSLVFDAVYTPKMTRLLREAEESGAKIVTGLEM 479

Query: 434  FVIQAYEQYERFTGLPAPKELFWELMS 354
            F+ QAYEQ+ERFTGLPAPKELF ++M+
Sbjct: 480  FIGQAYEQFERFTGLPAPKELFRKVMA 506


>emb|CBI26126.3| unnamed protein product [Vitis vinifera]
          Length = 495

 Score =  697 bits (1798), Expect = 0.0
 Identities = 350/493 (70%), Positives = 410/493 (83%), Gaps = 3/493 (0%)
 Frame = -2

Query: 1823 MLVMMKTAKTSGADIVEIRLDYLKCFLPSHDLEILIKNCPLPTLFTYRPKWEGGRYEGDE 1644
            M+V M  AKTSGAD+VE+RLD LK F P  DLE+LI+ CPLPTLFTYRPKWEGG+YEGDE
Sbjct: 1    MVVDMSKAKTSGADLVEVRLDTLKRFNPRQDLEVLIRKCPLPTLFTYRPKWEGGQYEGDE 60

Query: 1643 IVRLNALQLAMELGADYVDVELKVAPDFIKSIHGKKPENFKLIVSSHNYQKTPSVEDIRD 1464
              R +AL+LAMELGADYVD+ELKVA +FI SIHG+KPE FK+IVSSHNYQ TPSVED+ +
Sbjct: 61   NSRRDALRLAMELGADYVDIELKVAHEFINSIHGRKPEKFKVIVSSHNYQNTPSVEDLGN 120

Query: 1463 LVARIQGTGADIVKIATTAVDISDVARVLQITKNSQVPIIALVMTERGLMSRILCPKYGG 1284
            LV  IQ TGADIVKIATTA++I+DVAR+ QIT +SQVP+I LVM ERGL+SRILCPK+ G
Sbjct: 121  LVVSIQATGADIVKIATTALEITDVARIFQITVHSQVPVIGLVMGERGLISRILCPKFSG 180

Query: 1283 YLTFGTLEAGKVSAPGQPTVDNLLNLFNFRQIGPNTKIVGLIGNPVGHSKGPFLFNKAFK 1104
            YLTFG+LE G VSAPGQPT+ +LLNL+NFRQ+GP+TK+ G+IG PV HSK P L+N+AFK
Sbjct: 181  YLTFGSLEPGIVSAPGQPTIKDLLNLYNFRQLGPDTKVFGVIGKPVSHSKSPHLYNEAFK 240

Query: 1103 EVGFDGVYLPFLVDDIEKFLKTYASSPDFAGFSCTIPHKEEALRCCDEVDPVAKSIGAVN 924
             VGF+GVY+  LVDDI KF  TY S+ DFAGFSCTIPHKE AL+CCDEV PVAKSIGAVN
Sbjct: 241  SVGFNGVYVHLLVDDIAKFFHTY-SAADFAGFSCTIPHKEAALKCCDEVSPVAKSIGAVN 299

Query: 923  TIVRRPSDGKLIGYNTDYVGAISAIEIGLGGSH---NGTASPLAGKLFVVIXXXXXXXXX 753
             I+RRPSDGKL GYNTDYVGAISAIE GL   H   + + SPLAGKLFVVI         
Sbjct: 300  CIIRRPSDGKLFGYNTDYVGAISAIEDGLRDLHKISSTSGSPLAGKLFVVIGAGGAGKAL 359

Query: 752  XXXXXXXXARVLIANRTYSRARELADLVGGDAITLDELNKYHPEDGMILANTTSIGMQPK 573
                    ARV+IANRTY+RARELAD VGGDA++L +LN +HPE+GMILANTTSIGMQPK
Sbjct: 360  AYGAKEKGARVVIANRTYARARELADAVGGDALSLADLNNFHPENGMILANTTSIGMQPK 419

Query: 572  VNETPVAKEALSGYTLVFDAVYTPKMTRLLLDAEEAGCTVVTGLNMFVIQAYEQYERFTG 393
            V+ETP++K AL  Y+LVFDA+YTPK+TRLL +A+E+G T+VTGL MF+ QAYEQ+ERFTG
Sbjct: 420  VDETPISKHALKYYSLVFDAIYTPKITRLLREAQESGATIVTGLEMFIGQAYEQFERFTG 479

Query: 392  LPAPKELFWELMS 354
            LPAPKELF + +S
Sbjct: 480  LPAPKELFKQFIS 492


>ref|XP_002314474.1| dehydroquinate dehydratase/ shikimate dehydrogenase [Populus
            trichocarpa] gi|222863514|gb|EEF00645.1| dehydroquinate
            dehydratase/ shikimate dehydrogenase [Populus
            trichocarpa]
          Length = 538

 Score =  689 bits (1777), Expect = 0.0
 Identities = 350/511 (68%), Positives = 414/511 (81%), Gaps = 3/511 (0%)
 Frame = -2

Query: 1871 NKTLVCAPLMGETVEEMLVMMKTAKTSGADIVEIRLDYLKCFLPSHDLEILIKNCPLPTL 1692
            N TL+C P+M ++V++M ++M  AK+ GAD+VEIRLD LK F P+ D++ LI + PLPTL
Sbjct: 29   NPTLICTPIMADSVDKMAILMAEAKSVGADLVEIRLDSLKDFNPNSDIKTLILHSPLPTL 88

Query: 1691 FTYRPKWEGGRYEGDEIVRLNALQLAMELGADYVDVELKVAPDFIKSIHGKKPENFKLIV 1512
            FTYRP WEGG+Y GDE  RL+AL+LAMELGADY+DVELKVA +F + + G KP   KLIV
Sbjct: 89   FTYRPMWEGGQYNGDEKPRLDALRLAMELGADYIDVELKVAHEFNELLRGNKPGKCKLIV 148

Query: 1511 SSHNYQKTPSVEDIRDLVARIQGTGADIVKIATTAVDISDVARVLQITKNSQVPIIALVM 1332
            SSHNY+ TPSVE++ +LVARIQ  GADIVKIATTA+DISDVAR+ QIT +SQVPII LVM
Sbjct: 149  SSHNYENTPSVEELGNLVARIQAAGADIVKIATTALDISDVARIFQITVHSQVPIIGLVM 208

Query: 1331 TERGLMSRILCPKYGGYLTFGTLEAGKVSAPGQPTVDNLLNLFNFRQIGPNTKIVGLIGN 1152
             ERGL+SRILC K+GGYLTFGTLE+G VSAPGQPT+ +LL+L+NFR IGP+TK+ G+IG 
Sbjct: 209  GERGLISRILCAKFGGYLTFGTLESGVVSAPGQPTIKDLLDLYNFRLIGPDTKVFGIIGK 268

Query: 1151 PVGHSKGPFLFNKAFKEVGFDGVYLPFLVDDIEKFLKTYASSPDFAGFSCTIPHKEEALR 972
            PVGHSK P LFN+AFK VG +GVY+  LVDDI +FL+TY SS DFAGFSCTIPHKE+A +
Sbjct: 269  PVGHSKSPVLFNEAFKSVGINGVYVHLLVDDIARFLQTY-SSTDFAGFSCTIPHKEDAAK 327

Query: 971  CCDEVDPVAKSIGAVNTIVRRPSDGKLIGYNTDYVGAISAIEIGLGGSH---NGTASPLA 801
            CCDEV PVAKSIGAVN I+RR +DGKL GYNTDYVGAISAIE GL  S    N   SPLA
Sbjct: 328  CCDEVHPVAKSIGAVNCIIRRQNDGKLFGYNTDYVGAISAIEEGLRASQNVSNTVGSPLA 387

Query: 800  GKLFVVIXXXXXXXXXXXXXXXXXARVLIANRTYSRARELADLVGGDAITLDELNKYHPE 621
            GKLFVVI                 ARV+IANRTY RA+ LAD++GGDAITL +L  +HPE
Sbjct: 388  GKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKVLADIIGGDAITLADLENFHPE 447

Query: 620  DGMILANTTSIGMQPKVNETPVAKEALSGYTLVFDAVYTPKMTRLLLDAEEAGCTVVTGL 441
            DGMILANTTSIGMQPKV+ETPV+K AL  Y+LVFDAVYTPK+TRLL +AEE+G  +VTGL
Sbjct: 448  DGMILANTTSIGMQPKVDETPVSKNALRSYSLVFDAVYTPKITRLLREAEESGAKIVTGL 507

Query: 440  NMFVIQAYEQYERFTGLPAPKELFWELMSGY 348
             MF+ QAYEQ+ERFT LPAPKELF ++MS Y
Sbjct: 508  EMFIGQAYEQFERFTELPAPKELFQKIMSKY 538


>gb|AFO68799.1| shikimate dehydrogenase, partial [Pachysandra terminalis]
          Length = 490

 Score =  687 bits (1772), Expect = 0.0
 Identities = 347/498 (69%), Positives = 408/498 (81%)
 Frame = -2

Query: 1862 LVCAPLMGETVEEMLVMMKTAKTSGADIVEIRLDYLKCFLPSHDLEILIKNCPLPTLFTY 1683
            L+CAP+MGE+V++ML+ M+ AK  GAD+VE+RLDY+K F P  DL+ LI+ CPLPTL TY
Sbjct: 1    LICAPVMGESVDDMLMEMRKAKEYGADLVEVRLDYIKNFSPRKDLDTLIRECPLPTLITY 60

Query: 1682 RPKWEGGRYEGDEIVRLNALQLAMELGADYVDVELKVAPDFIKSIHGKKPENFKLIVSSH 1503
            RPKWEGG YEGDE  RL+AL++AMELG DY+D+EL+VA +FI S+H KKPE FK+IVSSH
Sbjct: 61   RPKWEGGLYEGDENKRLDALRVAMELGVDYIDIELQVAHEFIHSVHAKKPEKFKIIVSSH 120

Query: 1502 NYQKTPSVEDIRDLVARIQGTGADIVKIATTAVDISDVARVLQITKNSQVPIIALVMTER 1323
            NYQ TPSVEDI DLVARIQ TGADIVKIATTA++I+DVAR+ QI  +SQVPII LVM ER
Sbjct: 121  NYQSTPSVEDIGDLVARIQATGADIVKIATTALEITDVARMFQIIVHSQVPIIGLVMGER 180

Query: 1322 GLMSRILCPKYGGYLTFGTLEAGKVSAPGQPTVDNLLNLFNFRQIGPNTKIVGLIGNPVG 1143
            GLMSR+LCPK+GGYLTFG +EAGK+SAPGQPT+ +LL+ +NFRQIGP+TK+ G+IG PV 
Sbjct: 181  GLMSRLLCPKFGGYLTFGAIEAGKLSAPGQPTIKDLLDKYNFRQIGPDTKVFGVIGKPVS 240

Query: 1142 HSKGPFLFNKAFKEVGFDGVYLPFLVDDIEKFLKTYASSPDFAGFSCTIPHKEEALRCCD 963
             SK P L+N AFK +G++GVY+ FLVDDI KFLKTY  SPDFAGFSCT+PHKE AL   D
Sbjct: 241  QSKSPLLYNNAFKSIGYNGVYVQFLVDDIAKFLKTY-PSPDFAGFSCTMPHKEAALEYLD 299

Query: 962  EVDPVAKSIGAVNTIVRRPSDGKLIGYNTDYVGAISAIEIGLGGSHNGTASPLAGKLFVV 783
            E+DP+AK IGAVN IVRR SDGKL GYNTDY GAISAIE GL        S LAGKLFVV
Sbjct: 300  EIDPIAKLIGAVNCIVRR-SDGKLSGYNTDYFGAISAIEDGL-------RSLLAGKLFVV 351

Query: 782  IXXXXXXXXXXXXXXXXXARVLIANRTYSRARELADLVGGDAITLDELNKYHPEDGMILA 603
            I                 ARV+IANRT+ RA +LAD+VGG AI+L EL+ +HPEDGM+LA
Sbjct: 352  IGAGGAGKALAFGAKEKGARVVIANRTFDRASKLADIVGGQAISLMELDNFHPEDGMVLA 411

Query: 602  NTTSIGMQPKVNETPVAKEALSGYTLVFDAVYTPKMTRLLLDAEEAGCTVVTGLNMFVIQ 423
            NTTSIGMQPKV+ETP+ K+ALS Y+LVFDAVYTPK+TRLL +AEE G TVV+GL MF+ Q
Sbjct: 412  NTTSIGMQPKVDETPIPKKALSNYSLVFDAVYTPKLTRLLREAEECGATVVSGLEMFIRQ 471

Query: 422  AYEQYERFTGLPAPKELF 369
            AYEQYERFTGLPAPKELF
Sbjct: 472  AYEQYERFTGLPAPKELF 489