BLASTX nr result
ID: Coptis24_contig00004861
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00004861
(2163 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002330183.1| predicted protein [Populus trichocarpa] gi|2... 343 8e-92
ref|XP_002319493.1| predicted protein [Populus trichocarpa] gi|2... 343 1e-91
ref|XP_002278421.1| PREDICTED: uncharacterized protein LOC100240... 337 8e-90
ref|XP_002512479.1| splicing factor, arginine/serine-rich 2,rnap... 312 3e-82
ref|XP_003555617.1| PREDICTED: uncharacterized protein LOC100797... 308 3e-81
>ref|XP_002330183.1| predicted protein [Populus trichocarpa] gi|222871639|gb|EEF08770.1|
predicted protein [Populus trichocarpa]
Length = 735
Score = 343 bits (881), Expect = 8e-92
Identities = 202/425 (47%), Positives = 259/425 (60%), Gaps = 19/425 (4%)
Frame = -2
Query: 1727 DDDFDLDYKAVRERSRTKSVI---KDWVSDDSE-----PSDVEYTLSDEEKELLREANKF 1572
D DF D VRE+S+ S + K V+ DS+ SD +YT+S+EE+EL+REAN+F
Sbjct: 139 DGDFLADSSIVREKSKKHSGVRKRKFAVNSDSDFLSNGSSDYDYTISEEERELVREANQF 198
Query: 1571 LGISTTCSRDSSLNGKLHKDGASKCLKPTPMERKGKQKVHELHIDTGKQVCGICFSEERK 1392
+ T S SS GK ++ C + P+ RKGK+KV E+ + G+QVCGIC SEE K
Sbjct: 199 GELKT--SLRSSSAGKRFQENGDLCEQTKPLGRKGKEKVDEVKSELGRQVCGICLSEEDK 256
Query: 1391 GIVRGTLNCCSHYFCYACIMEWSKIESRCPLCKQRFVTISMPERSKLGVELRSLVIPIPT 1212
RGTL+CCSHYFC+ CIMEWSK+ESRCPLCKQRF TI+ RS +GV+LR++VI +P
Sbjct: 257 RRFRGTLDCCSHYFCFTCIMEWSKVESRCPLCKQRFRTITKNGRSIVGVDLRNMVIQVPK 316
Query: 1211 RDQVYQPTEEEMMGYLDPYDGVVCIECQEGGDDSLMLLCDICDSPSHTYCVGLGQEVPEG 1032
RDQVYQPTEEE+ Y+DPY+ V+C EC EGGDD LMLLCD+CDS +HTYCVGLG++VPEG
Sbjct: 317 RDQVYQPTEEEIRSYIDPYENVICKECHEGGDDGLMLLCDLCDSSAHTYCVGLGRQVPEG 376
Query: 1031 NWYCKGCRISDPGSSNVLVQDPSLGTSSNSIPTFLTSQRMSVN---DLDPTPQAVSALD- 864
NWYC CR GSS+ QD SL N + +N LDP ++ L
Sbjct: 377 NWYCDDCRPVALGSSSSQTQD-SLPDQWNISSNIFNRPSLMLNLEEGLDPNLESSPRLTV 435
Query: 863 PSLFRENEILPSPRSIVGDDVHLVSP-SGIGVSTLSGRRRIHRQIRSMLSN-NRVSHTTE 690
P F L SPR GD+ H+ SP SG G STLSGRR IHR IR +LSN N ++
Sbjct: 436 PQAFGS---LSSPRFPTGDN-HVASPVSGAGASTLSGRRHIHRNIRILLSNMNPSTNMNP 491
Query: 689 MPHRIDDNIESEIVADSEDEQLE---KTTTQQAGPSASNGFHSDGFE--VWTQDASPSSL 525
M +RID + + D + Q++ +T Q + E + T D PSS
Sbjct: 492 MANRIDVISAASLRGDLSNSQIDLGRETALQNLRTQEVDTLEQTHHEERLQTNDHQPSSF 551
Query: 524 LEIDN 510
D+
Sbjct: 552 QNRDS 556
>ref|XP_002319493.1| predicted protein [Populus trichocarpa] gi|222857869|gb|EEE95416.1|
predicted protein [Populus trichocarpa]
Length = 810
Score = 343 bits (880), Expect = 1e-91
Identities = 191/407 (46%), Positives = 251/407 (61%), Gaps = 28/407 (6%)
Frame = -2
Query: 1727 DDDFDLDYKAVRERSRTKSVIK----------DWVSDDSEPSDVEYTLSDEEKELLREAN 1578
D DF D RE+S+ S ++ D+VS+ S SD EYTLS+EE+E +REA+
Sbjct: 213 DGDFLADSPVAREKSKKTSGVRKRKFSVNSDSDFVSNGS--SDYEYTLSEEEREQVREAS 270
Query: 1577 KFLGISTTCSRDSSLNGKLHKDGASKCLKPTPMERKGKQKVHELHIDTGKQVCGICFSEE 1398
+ G T R SS+ ++ ++G C + P+ RKGK+KV E + GKQVCGIC SEE
Sbjct: 271 QLYGELKTSLRSSSVGKRIQENG-DLCQQTKPVGRKGKEKVKEEKSELGKQVCGICLSEE 329
Query: 1397 RKGIVRGTLNCCSHYFCYACIMEWSKIESRCPLCKQRFVTISMPERSKLGVELRSLVIPI 1218
K +RGTL+CCSHYFC+ CIMEWSK+ESRCPLCKQRF TI+ RS +GV+LR++VI +
Sbjct: 330 DKRRLRGTLDCCSHYFCFTCIMEWSKVESRCPLCKQRFSTIAKNGRSAMGVDLRNMVIEV 389
Query: 1217 PTRDQVYQPTEEEMMGYLDPYDGVVCIECQEGGDDSLMLLCDICDSPSHTYCVGLGQEVP 1038
P RDQVYQPTEEE+ Y+DPY+ V+C EC EGGDD LMLLCD+CDS +HTYCVGLG++VP
Sbjct: 390 PMRDQVYQPTEEEIRSYIDPYENVICKECHEGGDDGLMLLCDLCDSSAHTYCVGLGRQVP 449
Query: 1037 EGNWYCKGCRISDPGSSNVLVQDPSLGTSSNSIPTFLTSQRMSVNDLDPTPQAVSALDPS 858
EGNWYC CR GS++ QDP +P S N P LDP+
Sbjct: 450 EGNWYCDDCRPVALGSTSSQAQDP--------LPDQWNSSNNIFNRPSPILNLDEGLDPN 501
Query: 857 LFRENEI--------LPSPRSIVGDDVHLVSPSGI-GVSTLSGRRRIHRQIRSMLSN-NR 708
L + L SPR + G D+H+ SP + G STLSGRR +HR IR++LSN N
Sbjct: 502 LESAPRLTIPQVSGSLSSPRFLTG-DIHVASPVSVAGASTLSGRRHLHRHIRTLLSNRNP 560
Query: 707 VSHTTEMPHRIDDNIESEIVADSEDEQ--------LEKTTTQQAGPS 591
++ + +RID + + +D + Q L+ TQ+ G S
Sbjct: 561 SANMNPVANRIDVISAASLHSDFLNSQIDPVRETALQNLRTQEIGTS 607
>ref|XP_002278421.1| PREDICTED: uncharacterized protein LOC100240780 [Vitis vinifera]
Length = 733
Score = 337 bits (864), Expect = 8e-90
Identities = 196/428 (45%), Positives = 252/428 (58%), Gaps = 20/428 (4%)
Frame = -2
Query: 1736 VSSDDDFDLDYKAVRERSRTKSVIKDWVSDDSE-----PSDVEYTLSDEEKELLREANKF 1572
V +D DF + VRER K + + DSE SD E+T+S+EE+E +REA++F
Sbjct: 153 VDNDGDFIDERPVVRERKSHKRKRRLAPASDSEFVSSGSSDFEFTISEEEREQVREADEF 212
Query: 1571 LGISTTCSRDSSLNGKLHKDGASKCLKPTPMERKGKQKVHELHIDTGKQVCGICFSEERK 1392
ST R +SL K ++ + P RKGK+KV ++ + GKQVCGIC SEE K
Sbjct: 213 CRRSTNNMRSASLPAKTIEE------ERKPPVRKGKEKVEDVKNEVGKQVCGICLSEEGK 266
Query: 1391 GIVRGTLNCCSHYFCYACIMEWSKIESRCPLCKQRFVTISMPERSKLGVELRSLVIPIPT 1212
VRGTL+CCSHYFC+ CIMEWSK+ESRCPLCKQRF+TIS P R+ G++LR ++I +P
Sbjct: 267 RRVRGTLDCCSHYFCFGCIMEWSKVESRCPLCKQRFMTISKPARANTGIDLRDVMIQVPE 326
Query: 1211 RDQVYQPTEEEMMGYLDPYDGVVCIECQEGGDDSLMLLCDICDSPSHTYCVGLGQEVPEG 1032
RDQVY P+EEE+ GYLDPY+ V+C EC +GGDD LMLLCD+CDSP+HTYCVGLG+EVPEG
Sbjct: 327 RDQVYLPSEEEIRGYLDPYENVICTECHQGGDDGLMLLCDLCDSPAHTYCVGLGREVPEG 386
Query: 1031 NWYCKGCRISDPGSSNVLVQDPSLGTSSNSIPTFLTSQRMSVNDLDPTPQAVSALDPSLF 852
NWYC+GCR S VQDP L+ R + N L P V + SL
Sbjct: 387 NWYCEGCRPSQ-------VQDP------------LSDHRTTQNTLSDRPSPVGNIGESLV 427
Query: 851 RENEILPSP-RSIVGDDV-------HLVSP-SGIGVSTLSGRRRIHRQIRSMLSNNRVSH 699
+L +P +G ++ SP S G STLSGRR IHRQI + SNNR+SH
Sbjct: 428 TSLSLLSTPFTQGIGINISPRYRNAEAASPVSASGASTLSGRRWIHRQIHQIRSNNRMSH 487
Query: 698 T------TEMPHRIDDNIESEIVADSEDEQLEKTTTQQAGPSASNGFHSDGFEVWTQDAS 537
P+ D + S+I D+ L+ T +Q + HS E QD
Sbjct: 488 VAVRNIGNSAPNSGSDFLNSQI-----DQGLD-TASQHTKALETGTSHSTFLEESLQDNR 541
Query: 536 PSSLLEID 513
SL +D
Sbjct: 542 YPSLQNMD 549
>ref|XP_002512479.1| splicing factor, arginine/serine-rich 2,rnap interacting protein,
putative [Ricinus communis] gi|223548440|gb|EEF49931.1|
splicing factor, arginine/serine-rich 2,rnap interacting
protein, putative [Ricinus communis]
Length = 791
Score = 312 bits (799), Expect = 3e-82
Identities = 186/435 (42%), Positives = 262/435 (60%), Gaps = 21/435 (4%)
Frame = -2
Query: 1727 DDDFDLDYKAVRERSRTKSVIK---------DWVSDDSEPSDVEYTLSDEEKELLREANK 1575
+ +F D VR RS S + D++S S SD EYT+S+EE+E +RE +K
Sbjct: 201 EGEFIDDSAFVRARSSKNSSARSRYAVYSDSDFMSSGS--SDYEYTISEEEREQVREGSK 258
Query: 1574 FLGISTTCSRDSSLNGKLHKDGASKCLKPTPMERKGKQKVHELHIDTGKQVCGICFSEER 1395
G+ T+ SS+ + ++ C + + RKGK+KV E+ + GKQ+CGIC SEE
Sbjct: 259 LFGVKTSLRSSSSI--RKTQESGDLCQQGKSLARKGKEKVKEVKPELGKQMCGICLSEED 316
Query: 1394 KGIVRGTLNCCSHYFCYACIMEWSKIESRCPLCKQRFVTISMPERSKLGVELRSLVIPIP 1215
K +RGTL+CCSHYFC+ CIMEWSK+ESRCPLCKQRF TI+ R+ +GVE R++VI +P
Sbjct: 317 KRRLRGTLDCCSHYFCFTCIMEWSKVESRCPLCKQRFKTITKNGRAAVGVEPRNVVIQVP 376
Query: 1214 TRDQVYQPTEEEMMGYLDPYDGVVCIECQEGGDDSLMLLCDICDSPSHTYCVGLGQEVPE 1035
RDQVYQP+EEE+ ++DPY+ V+C EC EGG+D LMLLCD+CDSP+HT+CVGLG++VPE
Sbjct: 377 KRDQVYQPSEEEIRSFIDPYENVICTECHEGGEDGLMLLCDLCDSPAHTFCVGLGRQVPE 436
Query: 1034 GNWYCKGCRISDPGSSNVLVQDPSLG-TSSNSIPTFLTSQRMSVNDLDPT--PQAVSALD 864
GNWYC+ CR GS++ DP ++N+I + + SV D T P A
Sbjct: 437 GNWYCEVCRPVALGSTSSQALDPMPDQRTTNNIFSRPSPDTNSVEGFDATSEPSPRLAFA 496
Query: 863 PSLFRENEILPSPRSIVGDDVHLVSP-SGIGVSTLSGRRRIHRQIRSMLSNNRVSHTTEM 687
P L SPR G DV SP SG G STLS RR++HR I++++S +R+ + M
Sbjct: 497 PGF----GSLSSPRFPAG-DVQAASPVSGAGGSTLSQRRQLHRHIQNLISMSRMHY---M 548
Query: 686 PHRIDD----NIESEIVADSEDE----QLEKTTTQQAGPSASNGFHSDGFEVWTQDASPS 531
+R D N+ ++ D+ ++ + TQ+ G S S F + E D S
Sbjct: 549 ANRTDGISAANLHIDLSNPHNDQCRETIVQNSRTQEIGASQST-FLDERLE--ANDYPSS 605
Query: 530 SLLEIDNTAAQSSNI 486
S+ D +++SS +
Sbjct: 606 SMQNGDLFSSRSSQM 620
>ref|XP_003555617.1| PREDICTED: uncharacterized protein LOC100797448 [Glycine max]
Length = 813
Score = 308 bits (790), Expect = 3e-81
Identities = 201/498 (40%), Positives = 266/498 (53%), Gaps = 28/498 (5%)
Frame = -2
Query: 1748 MRKPVSSDDDFDLDYKAVRERSRTKS-------VIKDWVSDDSEPSDVEYTLSDEEKELL 1590
+RK +DDF + + +R K ++ D S SD E+T+S+EE+E +
Sbjct: 233 LRKKEKCEDDFIDNGTTIGTTTRRKQGQKRRRVLLSDSDYASSGSSDFEFTISEEEREQV 292
Query: 1589 REANKFLGISTTCSRDSSLNGKLHKDGASKCLKPT--------------PMERKGKQKVH 1452
REA + G R SS + G + P P+ RKGK+KV
Sbjct: 293 REAKRLCGNLRNNLRSSSHLINNEEVGVHEYQHPQRKPPARKGKEKIEEPLGRKGKEKVE 352
Query: 1451 ELHIDTGKQVCGICFSEERKGIVRGTLNCCSHYFCYACIMEWSKIESRCPLCKQRFVTIS 1272
+L GKQ CGIC SEE K VRG LNCC+H+FC+ACIMEW+K+ESRCPLCKQRF IS
Sbjct: 353 DLK-SKGKQTCGICLSEEDKRRVRGVLNCCTHFFCFACIMEWAKVESRCPLCKQRFKAIS 411
Query: 1271 MPERSKLGVELRSLVIPIPTRDQVYQPTEEEMMGYLDPYDGVVCIECQEGGDDSLMLLCD 1092
P RS G++LR +VI +P RDQVYQP+EEE+ Y+DPY+ V+C EC +GGDD LMLLCD
Sbjct: 412 KPARSTTGIDLREVVIQVPERDQVYQPSEEELRSYIDPYEYVICSECHQGGDDGLMLLCD 471
Query: 1091 ICDSPSHTYCVGLGQEVPEGNWYCKGCRISDPGSSNVLVQ----DPSLGTSSNSI-PTFL 927
ICDSP+HTYCVGLG+EVPEGNWYC GCR GSS+ VQ DP + S+ + P +
Sbjct: 472 ICDSPAHTYCVGLGREVPEGNWYCDGCRPVALGSSSSQVQEGVADPRVSVQSHPVRPPPV 531
Query: 926 TSQRMSVNDLDPTPQAVSALDPSLFRENEILPSPRSIVGDDVHLVSPSGIGVSTLSGRRR 747
R S+ DL+ +A + LPS R G SP G TLS RR
Sbjct: 532 LHVRESI-DLNLISSPRAAFNQGFGH----LPSSR-FSGRSAEGASPVSGGAPTLSERRW 585
Query: 746 IHRQIRSMLSNNRVSHTTEMPHRIDDNIESEIVADSEDEQLEKTTTQQA-GPSASNGFHS 570
IHRQI+ +LS +R++ T + I + + S +Q TTT A +H+
Sbjct: 586 IHRQIQQLLSIDRMASTPGRTNGISATSSTSNLYSSHFDQSRGTTTLHARTQDVGTSYHT 645
Query: 569 DGFEVWTQDASPSSLLEIDNTAAQSSNIEGNSSASQQSNSVFGCQQL-QHHRSSLFSWPD 393
E ++SP + A S + G + V C+Q+ Q RS++ PD
Sbjct: 646 FFDERLCNNSSP-----LMQNGALWSGLMG-------TPPVPDCEQVHQFSRSNIV--PD 691
Query: 392 DCEFPRQRRSSSSHFQVE 339
P R S+ HF E
Sbjct: 692 GGLSPAVREESNFHFAKE 709