BLASTX nr result
ID: Coptis24_contig00004854
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004854 (2027 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002270708.1| PREDICTED: uncharacterized protein LOC100249... 400 e-109 ref|XP_002304401.1| predicted protein [Populus trichocarpa] gi|2... 388 e-105 emb|CBI29217.3| unnamed protein product [Vitis vinifera] 378 e-102 ref|XP_003612544.1| RING finger protein [Medicago truncatula] gi... 361 4e-97 ref|XP_003516501.1| PREDICTED: uncharacterized protein LOC100815... 360 6e-97 >ref|XP_002270708.1| PREDICTED: uncharacterized protein LOC100249371 [Vitis vinifera] Length = 566 Score = 400 bits (1027), Expect = e-109 Identities = 223/449 (49%), Positives = 278/449 (61%), Gaps = 22/449 (4%) Frame = +2 Query: 278 SSTEALPAPSLISSTRLRPRFSFIPANFTFXXXXXXXXXXXXTYSLFSNGVNTANAQLPR 457 SST A SL S+R RFS IP N +F Y + S+ + + + + Sbjct: 119 SSTRASSTQSLNPSSRFLSRFSLIPGNISFRLSRASSLGSSRAYPVSSSSITSNSGEELH 178 Query: 458 VHSNPSDNC----------DSLPVTLDVDDSVHPLNDEIVSSQ--GVASNNENNLGDGDT 601 + + PS++ D LPV L D + + +S +N+ D T Sbjct: 179 LRTGPSNSLVNRNGTQQGSDLLPVCLINRSPTSYYEDNSANRRLDPPSSVFSDNMRDNPT 238 Query: 602 ----------SRNSIDIDSIGSRRANRRLGVREPVERSVRFSRTLSVGRLRDRVLRRSSF 751 + +I+S+ +R A+RR+G REPVER+VRFSRTLSVGRLRDRVLRRSSF Sbjct: 239 ITTHDVNLHSTSGHAEIESMETRLADRRIGPREPVERNVRFSRTLSVGRLRDRVLRRSSF 298 Query: 752 TDGLFGRLQEDREVRDSSQENERQVWDGMSTTLDSADGNAEIXXXXXXXXXXXXXXXMYN 931 +D F L+ +RE RD SQ +ERQV D T + D N ++ Sbjct: 299 SDLTFCPLRREREARDMSQGSERQVLDN-ETRAPATDRNVATSPTSSGYPLSSMSSSLFG 357 Query: 932 SQDYELETSRPREARYHDIMEHRTDFLERRRRIRSQVRALQRLGSRFENLSGHERSCILA 1111 SQD+E+ETSR R+ARYHD++EHR++FLERRRRIRSQVRALQRLGSRFENLSGHERSCI + Sbjct: 358 SQDFEMETSRSRDARYHDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHERSCISS 417 Query: 1112 GQHXXXXXXXXXXXXXXXPDDDTSAGASISRIVMLAEALFEVLDEIHQQXXXXXXXXXXX 1291 GQH +DDTSA ASISRIVMLAEALFEVLDEIHQQ Sbjct: 418 GQHRTGRCTCRVNTRDANSNDDTSARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVS 477 Query: 1292 XXXXXXAPKEIVESMPVKIFTDLQKHQNEDVAQCYICLVEYEEGDCMRILPCHHEFHRTC 1471 AP E+VES+P+K++ QKHQN++ AQCYICLVEYEEGD MR+LPCHHEFHRTC Sbjct: 478 SIGSVPAPNEVVESLPLKLYDKSQKHQNDEAAQCYICLVEYEEGDNMRVLPCHHEFHRTC 537 Query: 1472 IDKWLKDIHRVCPLCRGDVCKSESLPSQN 1558 +DKWLK+IHRVCPLCRGD+C+S SL ++N Sbjct: 538 VDKWLKEIHRVCPLCRGDICRSGSLLAEN 566 >ref|XP_002304401.1| predicted protein [Populus trichocarpa] gi|222841833|gb|EEE79380.1| predicted protein [Populus trichocarpa] Length = 588 Score = 388 bits (997), Expect = e-105 Identities = 224/468 (47%), Positives = 270/468 (57%), Gaps = 38/468 (8%) Frame = +2 Query: 269 GDRSSTEALPAPSLISSTRLRPRFSFIPANFTFXXXXXXXXXXXXTYSLFSNGVNTANAQ 448 G S+ A P S +RL R SFIP N +F Y S G + + Sbjct: 122 GSSSARAAAPTQSSTFPSRLLSRLSFIPGNVSFRLSRAVSLGSSRAYHTHSTGPRMFDGE 181 Query: 449 LPRVHSNPSDNC----------------------------DSLPVTLDVDDSVHPLNDEI 544 H S N + L + L D + Sbjct: 182 DEIRHHPQSANSVVDGNGNEIQQISDLLATSLASRTAHHHEDTAAGLQLHSQAPDLLDNM 241 Query: 545 VSSQGVAS-NNENNLGDGD---------TSRNSIDIDSIGSRRANRRLGVREPVERSVRF 694 +Q + S N G G+ + R D+D I +R ++RR+G REP ER+VRF Sbjct: 242 QENQNIFSIRNSGRDGGGNRVEVDANLRSPRMFNDMDGIETRLSDRRIGAREPAERNVRF 301 Query: 695 SRTLSVGRLRDRVLRRSSFTDGLFGRLQEDREVRDSSQENERQVWDGMSTTLDSADGNAE 874 SRTLSVGRLRDRVLRRSS + F LQ++RE+R SSQ + RQ G +S +GN Sbjct: 302 SRTLSVGRLRDRVLRRSSLPELTFCPLQQEREMRGSSQGSGRQAVGGEMRVSES-EGNTL 360 Query: 875 IXXXXXXXXXXXXXXXMYNSQDYELETSRPREARYHDIMEHRTDFLERRRRIRSQVRALQ 1054 +++ QD+E+ETSR REARY D++EHR++FLERRRRIRSQVRALQ Sbjct: 361 TSTTALGYPPSGMSSSLFSIQDHEVETSRTREARYRDLLEHRSNFLERRRRIRSQVRALQ 420 Query: 1055 RLGSRFENLSGHERSCILAGQHXXXXXXXXXXXXXXXPDDDTSAGASISRIVMLAEALFE 1234 RLGSRFENLSGHERSCIL+GQH +DDTSA ASISRIVMLAEALFE Sbjct: 421 RLGSRFENLSGHERSCILSGQHRTGRCTCRVNNRDANLNDDTSARASISRIVMLAEALFE 480 Query: 1235 VLDEIHQQXXXXXXXXXXXXXXXXXAPKEIVESMPVKIFTDLQKHQNEDVAQCYICLVEY 1414 VLDEIHQQ AP EIVES+PVK++ QKHQNED AQCYICLVEY Sbjct: 481 VLDEIHQQSVVLSSLPSMSSLGSVPAPNEIVESLPVKLYAKSQKHQNEDTAQCYICLVEY 540 Query: 1415 EEGDCMRILPCHHEFHRTCIDKWLKDIHRVCPLCRGDVCKSESLPSQN 1558 EEGD MR+LPCHHEFHRTC+DKWLK+IHRVCPLCRGD+C+SES P++N Sbjct: 541 EEGDSMRVLPCHHEFHRTCVDKWLKEIHRVCPLCRGDICRSESSPAEN 588 >emb|CBI29217.3| unnamed protein product [Vitis vinifera] Length = 498 Score = 378 bits (970), Expect = e-102 Identities = 241/520 (46%), Positives = 286/520 (55%), Gaps = 55/520 (10%) Frame = +2 Query: 164 VLHSSCL----GLSH-------DDHLVKEN------------DSLTLKSQPCRKVKDD-- 268 V HSSCL G H DDH KEN +S LKS RKVK + Sbjct: 25 VFHSSCLRPPSGSHHSDSDNDSDDHPNKENGCNGPCTDQNETESDQLKSGCFRKVKVEQP 84 Query: 269 --------------------------GDRSSTEALPAPSLISSTRLRPRFSFIPANFTFX 370 SST A SL S+R RFS IP N +F Sbjct: 85 DEMPSISSNVGLQEWDQANFTRTSSRAGSSSTRASSTQSLNPSSRFLSRFSLIPGNISFR 144 Query: 371 XXXXXXXXXXXTYSLFSNGV----NTANAQLPRVHSNPSDNCDSLPVTLDVDDSVHPLND 538 Y + S+ + N+AN +L S SDN P D ++H Sbjct: 145 LSRASSLGSSRAYPVSSSSITSNNNSANRRLDPPSSVFSDNMRDNPTITTHDVNLH---- 200 Query: 539 EIVSSQGVASNNENNLGDGDTSRNSIDIDSIGSRRANRRLGVREPVERSVRFSRTLSVGR 718 S+ G A +I+S+ +R A+RR+G REPVER+VRFSRTLSVGR Sbjct: 201 ---STSGHA-----------------EIESMETRLADRRIGPREPVERNVRFSRTLSVGR 240 Query: 719 LRDRVLRRSSFTDGLFGRLQEDREVRDSSQENERQVWDGMSTTLDSADGNAEIXXXXXXX 898 LRDRVLRRSSF+D F L+ +RE RD SQ +ERQV D T + D N Sbjct: 241 LRDRVLRRSSFSDLTFCPLRREREARDMSQGSERQVLDN-ETRAPATDRNVATSP----- 294 Query: 899 XXXXXXXXMYNSQDYELETSRPREARYHDIMEHRTDFLERRRRIRSQVRALQRLGSRFEN 1078 S Y P +ARYHD++EHR++FLERRRRIRSQVRALQRLGSRFEN Sbjct: 295 ----------TSSGY------PLDARYHDLLEHRSNFLERRRRIRSQVRALQRLGSRFEN 338 Query: 1079 LSGHERSCILAGQHXXXXXXXXXXXXXXXPDDDTSAGASISRIVMLAEALFEVLDEIHQQ 1258 LSGHERSCI +GQH +DDTSA ASISRIVMLAEALFEVLDEIHQQ Sbjct: 339 LSGHERSCISSGQHRTGRCTCRVNTRDANSNDDTSARASISRIVMLAEALFEVLDEIHQQ 398 Query: 1259 XXXXXXXXXXXXXXXXXAPKEIVESMPVKIFTDLQKHQNEDVAQCYICLVEYEEGDCMRI 1438 AP E+VES+P+K++ QKHQN++ AQCYICLVEYEEGD MR+ Sbjct: 399 SVVLSSRPSVSSIGSVPAPNEVVESLPLKLYDKSQKHQNDEAAQCYICLVEYEEGDNMRV 458 Query: 1439 LPCHHEFHRTCIDKWLKDIHRVCPLCRGDVCKSESLPSQN 1558 LPCHHEFHRTC+DKWLK+IHRVCPLCRGD+C+S SL ++N Sbjct: 459 LPCHHEFHRTCVDKWLKEIHRVCPLCRGDICRSGSLLAEN 498 >ref|XP_003612544.1| RING finger protein [Medicago truncatula] gi|355513879|gb|AES95502.1| RING finger protein [Medicago truncatula] Length = 560 Score = 361 bits (927), Expect = 4e-97 Identities = 223/496 (44%), Positives = 285/496 (57%), Gaps = 48/496 (9%) Frame = +2 Query: 215 ENDSLTLKSQPCRKVK-------------DDGDRSSTEALPAPSLISST-------RLRP 334 E DS +KS+ RKVK D+ R+ + + + SST R Sbjct: 70 EIDSDEVKSESFRKVKPEEIPCMPSNIDLDEWSRTESRTASSSAHGSSTQSTNPASRFLS 129 Query: 335 RFSFIPANFTF-------XXXXXXXXXXXXTYSLFSN--------------GVNTANAQL 451 RFS IP N +F + S+F+N + N Sbjct: 130 RFSIIPGNISFRLSRTTSLGSSRPCPVSSASLSIFNNEDELSLHPRPHDLLNASFVNQVP 189 Query: 452 PRVHSNPSDNCDSLPVTLDVDDS-----VHPLNDEIVSSQGVASNNENNLGDGDTSRNSI 616 H N S+N S T +D + + P+ D + G A+ + + + + R Sbjct: 190 IENHENASNNLSSNVPTFGLDRNLSSPMLSPIQDMV--RDGYATRDMPGV-NMFSPRIHT 246 Query: 617 DIDSIGSRRANRRLGVREPVERSVRFSRTLSVGRLRDRVLRRSSFTDGLFGRLQEDREVR 796 + + +R+ +RR G REPV+R+VRFSRTLSVGRLRDRV RRS D F L ++RE+R Sbjct: 247 ETGNAETRQIDRRNGAREPVDRNVRFSRTLSVGRLRDRVHRRSGLADFNFCPLTQERELR 306 Query: 797 DSSQENERQVWDGMSTTLDSADGNAEIXXXXXXXXXXXXXXXMYNSQDYELETSRPREAR 976 D+S++N RQV + T + +D NA + +QDYE+E SR RE R Sbjct: 307 DASEDNGRQVGE-RGTRVSPSDRNALNSHTTSGYPLPNMSSSPFTTQDYEVEASRSRETR 365 Query: 977 YHDIMEHRTDFLERRRRIRSQVRALQRLGSRFENLSGHERSCILAGQH--XXXXXXXXXX 1150 Y D++EHR++FLERRRRIRSQVRALQRLGSRFENLSGH+RSCIL+GQH Sbjct: 366 YQDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCILSGQHRNGRCTCRLTSR 425 Query: 1151 XXXXXPDDDTSAGASISRIVMLAEALFEVLDEIHQQXXXXXXXXXXXXXXXXXAPKEIVE 1330 +DDT+A ASISRIVMLAEALFEVLDEIHQQ AP E+VE Sbjct: 426 DNNSNSNDDTNARASISRIVMLAEALFEVLDEIHQQSVVLSSRPSVSSIGSVPAPAEVVE 485 Query: 1331 SMPVKIFTDLQKHQNEDVAQCYICLVEYEEGDCMRILPCHHEFHRTCIDKWLKDIHRVCP 1510 S+PVK++T LQKHQ E V QCYICLVEYE+GD MR+LPCHHEFH TCIDKWLK++HRVCP Sbjct: 486 SLPVKLYTKLQKHQEEPV-QCYICLVEYEDGDSMRVLPCHHEFHTTCIDKWLKEVHRVCP 544 Query: 1511 LCRGDVCKSESLPSQN 1558 LCRGD+C S+SLP++N Sbjct: 545 LCRGDICISDSLPTEN 560 >ref|XP_003516501.1| PREDICTED: uncharacterized protein LOC100815830 [Glycine max] Length = 567 Score = 360 bits (925), Expect = 6e-97 Identities = 223/510 (43%), Positives = 276/510 (54%), Gaps = 62/510 (12%) Frame = +2 Query: 215 ENDSLTLKSQPCRKVKDDGD-----------------------RSSTEALPAPSLISSTR 325 E DS +K++ RKVK D SS + SL S+R Sbjct: 67 EIDSDEVKTESFRKVKSDKSDEVPCVPSNIDLEEWGHTASRTGSSSAHSSSNQSLNPSSR 126 Query: 326 LRPRFSFIPANFTFXXXXXXXXXXXXTYSLFSNGVNTAN--------------------- 442 RFS +P N +F + S ++ N Sbjct: 127 FLSRFSLVPGNISFRLSRTTSLGSSRPCPVSSESLSIFNNEDELNLPPGLPGSLINRNET 186 Query: 443 ------------AQLP-RVHSNPSDNCDSLPVTLD-----VDDSVHPLNDEIVSSQGVAS 568 +Q+P + H S+N S +TL V + + D + G Sbjct: 187 QHRCDLLNASLASQVPIQCHQEASNNLRSNTLTLVSPGNLVSSRISSVQDVVRDGNGTRE 246 Query: 569 NNENNLGDGDTSRNSIDIDSIGSRRANRRLGVREPVERSVRFSRTLSVGRLRDRVLRRSS 748 + NL + R D + I +R +RR G REPVER+VRFSRTLSVGRLRDRVLRR++ Sbjct: 247 VPDMNLF---SPRIHTDTEDIETRHTDRRNGAREPVERNVRFSRTLSVGRLRDRVLRRTT 303 Query: 749 FTDGLFGRLQEDREVRDSSQENERQVWDGMSTTLDSADGNAEIXXXXXXXXXXXXXXXMY 928 +D F LQ +R D+SQ+N R+ G T S G ++ Sbjct: 304 VSDFTFCPLQRER---DASQDNGRRA--GERDTRLSPSGRNATNSSTPRYPLPSTPSSLF 358 Query: 929 NSQDYELETSRPREARYHDIMEHRTDFLERRRRIRSQVRALQRLGSRFENLSGHERSCIL 1108 QDYE+ETSR RE RY D++EHR++FLERRRRIRSQVRALQRLGSRFENLSGH+RSCIL Sbjct: 359 GIQDYEVETSRSRETRYQDLLEHRSNFLERRRRIRSQVRALQRLGSRFENLSGHDRSCIL 418 Query: 1109 AGQHXXXXXXXXXXXXXXXPDDDTSAGASISRIVMLAEALFEVLDEIHQQXXXXXXXXXX 1288 +GQH +DDT+A ASISRIVMLAEALFEVLDEIHQQ Sbjct: 419 SGQHRNGRCACRINSRDTNSNDDTNARASISRIVMLAEALFEVLDEIHQQSMVLSSRPSV 478 Query: 1289 XXXXXXXAPKEIVESMPVKIFTDLQKHQNEDVAQCYICLVEYEEGDCMRILPCHHEFHRT 1468 AP E+VES+PVK++T L KHQ E V QCYICLVEYE+GD MR+LPCHHEFH T Sbjct: 479 SSIGSVPAPNEVVESLPVKLYTKLHKHQEEPV-QCYICLVEYEDGDSMRVLPCHHEFHTT 537 Query: 1469 CIDKWLKDIHRVCPLCRGDVCKSESLPSQN 1558 C+DKWLK+IHRVCPLCRGD+C S+SLP +N Sbjct: 538 CVDKWLKEIHRVCPLCRGDICASDSLPREN 567