BLASTX nr result

ID: Coptis24_contig00004844 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004844
         (217 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635666.1| PREDICTED: protein transport protein Sec61 s...   129   2e-28
ref|XP_003635558.1| PREDICTED: protein transport protein Sec61 s...   129   2e-28
ref|XP_003540494.1| PREDICTED: protein transport protein Sec61 s...   129   2e-28
ref|XP_003540056.1| PREDICTED: protein transport protein Sec61 s...   129   2e-28
emb|CBI20172.3| unnamed protein product [Vitis vinifera]              129   2e-28

>ref|XP_003635666.1| PREDICTED: protein transport protein Sec61 subunit alpha-like,
           partial [Vitis vinifera]
          Length = 314

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/71 (91%), Positives = 66/71 (92%)
 Frame = -3

Query: 215 IIWKAFCPTTINSGRGAEFEGAVIVLFHLLITRTDKVWVLWDAFYRQNLPNVTNLLATVL 36
           IIWKAF PTTINSGRGAEFEGAVI LFHLLITRTDKV  L +AFYRQNLPNVTNLLATVL
Sbjct: 194 IIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVL 253

Query: 35  IFLIVIYFQGF 3
           IFLIVIYFQGF
Sbjct: 254 IFLIVIYFQGF 264


>ref|XP_003635558.1| PREDICTED: protein transport protein Sec61 subunit alpha-like,
           partial [Vitis vinifera]
          Length = 304

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/71 (91%), Positives = 66/71 (92%)
 Frame = -3

Query: 215 IIWKAFCPTTINSGRGAEFEGAVIVLFHLLITRTDKVWVLWDAFYRQNLPNVTNLLATVL 36
           IIWKAF PTTINSGRGAEFEGAVI LFHLLITRTDKV  L +AFYRQNLPNVTNLLATVL
Sbjct: 194 IIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVL 253

Query: 35  IFLIVIYFQGF 3
           IFLIVIYFQGF
Sbjct: 254 IFLIVIYFQGF 264


>ref|XP_003540494.1| PREDICTED: protein transport protein Sec61 subunit alpha-like
           [Glycine max]
          Length = 476

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/71 (91%), Positives = 66/71 (92%)
 Frame = -3

Query: 215 IIWKAFCPTTINSGRGAEFEGAVIVLFHLLITRTDKVWVLWDAFYRQNLPNVTNLLATVL 36
           IIWKAF PTTINSGRGAEFEGAVI LFHLLITRTDKV  L +AFYRQNLPNVTNLLATVL
Sbjct: 194 IIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVL 253

Query: 35  IFLIVIYFQGF 3
           IFLIVIYFQGF
Sbjct: 254 IFLIVIYFQGF 264


>ref|XP_003540056.1| PREDICTED: protein transport protein Sec61 subunit alpha-like
           [Glycine max]
          Length = 476

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/71 (91%), Positives = 66/71 (92%)
 Frame = -3

Query: 215 IIWKAFCPTTINSGRGAEFEGAVIVLFHLLITRTDKVWVLWDAFYRQNLPNVTNLLATVL 36
           IIWKAF PTTINSGRGAEFEGAVI LFHLLITRTDKV  L +AFYRQNLPNVTNLLATVL
Sbjct: 194 IIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVL 253

Query: 35  IFLIVIYFQGF 3
           IFLIVIYFQGF
Sbjct: 254 IFLIVIYFQGF 264


>emb|CBI20172.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  129 bits (325), Expect = 2e-28
 Identities = 65/71 (91%), Positives = 66/71 (92%)
 Frame = -3

Query: 215 IIWKAFCPTTINSGRGAEFEGAVIVLFHLLITRTDKVWVLWDAFYRQNLPNVTNLLATVL 36
           IIWKAF PTTINSGRGAEFEGAVI LFHLLITRTDKV  L +AFYRQNLPNVTNLLATVL
Sbjct: 128 IIWKAFSPTTINSGRGAEFEGAVIALFHLLITRTDKVRALREAFYRQNLPNVTNLLATVL 187

Query: 35  IFLIVIYFQGF 3
           IFLIVIYFQGF
Sbjct: 188 IFLIVIYFQGF 198


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