BLASTX nr result

ID: Coptis24_contig00004835 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004835
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237603.1| ubiquitin carrier protein 4 [Glycine max] gi...   209   2e-71
ref|XP_003548669.1| PREDICTED: ubiquitin-conjugating enzyme E2 5...   209   2e-71
ref|XP_002279927.1| PREDICTED: ubiquitin-conjugating enzyme E2 5...   211   2e-71
ref|XP_002276343.1| PREDICTED: ubiquitin-conjugating enzyme E2 5...   210   3e-71
ref|XP_002511883.1| ubiquitin-conjugating enzyme h, putative [Ri...   209   6e-71

>ref|NP_001237603.1| ubiquitin carrier protein 4 [Glycine max]
           gi|6066285|gb|AAF03236.1|AF180143_1 ubiquitin carrier
           protein 4 [Glycine max]
          Length = 183

 Score =  209 bits (531), Expect(2) = 2e-71
 Identities = 94/102 (92%), Positives = 100/102 (98%)
 Frame = +2

Query: 200 SPSKRREMDLMKLMMSDYKVEMINDGMQEFFVDFHGPTESPYHGGVWRIRVELPDAYPYK 379
           SPSKRREMDLMKLMMSDYKVEMINDGMQEF+V FHGP ESPYHGGVW++RVELPDAYPYK
Sbjct: 3   SPSKRREMDLMKLMMSDYKVEMINDGMQEFYVHFHGPNESPYHGGVWKVRVELPDAYPYK 62

Query: 380 SPSVGFVNKIYHPNVDEVSGSVCLDVINQTWSPMFDLVNVFE 505
           SPS+GF+NKIYHPNVDE+SGSVCLDVINQTWSPMFDLVNVFE
Sbjct: 63  SPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFE 104



 Score = 87.0 bits (214), Expect(2) = 2e-71
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = +3

Query: 570 DLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDKSTYEQRVK 698
           DLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRD++TYEQRVK
Sbjct: 98  DLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRATYEQRVK 140


>ref|XP_003548669.1| PREDICTED: ubiquitin-conjugating enzyme E2 5-like [Glycine max]
          Length = 183

 Score =  209 bits (531), Expect(2) = 2e-71
 Identities = 94/102 (92%), Positives = 100/102 (98%)
 Frame = +2

Query: 200 SPSKRREMDLMKLMMSDYKVEMINDGMQEFFVDFHGPTESPYHGGVWRIRVELPDAYPYK 379
           SPSKRREMDLMKLMMSDYKVEMINDGMQEF+V FHGP ESPYHGGVW++RVELPDAYPYK
Sbjct: 3   SPSKRREMDLMKLMMSDYKVEMINDGMQEFYVHFHGPNESPYHGGVWKVRVELPDAYPYK 62

Query: 380 SPSVGFVNKIYHPNVDEVSGSVCLDVINQTWSPMFDLVNVFE 505
           SPS+GF+NKIYHPNVDE+SGSVCLDVINQTWSPMFDLVNVFE
Sbjct: 63  SPSIGFINKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFE 104



 Score = 87.0 bits (214), Expect(2) = 2e-71
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = +3

Query: 570 DLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDKSTYEQRVK 698
           DLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRD++TYEQRVK
Sbjct: 98  DLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRATYEQRVK 140


>ref|XP_002279927.1| PREDICTED: ubiquitin-conjugating enzyme E2 5 [Vitis vinifera]
           gi|147765325|emb|CAN60588.1| hypothetical protein
           VITISV_023123 [Vitis vinifera]
           gi|297742213|emb|CBI34362.3| unnamed protein product
           [Vitis vinifera]
          Length = 183

 Score =  211 bits (537), Expect(2) = 2e-71
 Identities = 96/102 (94%), Positives = 101/102 (99%)
 Frame = +2

Query: 200 SPSKRREMDLMKLMMSDYKVEMINDGMQEFFVDFHGPTESPYHGGVWRIRVELPDAYPYK 379
           SPSKRREMDLMKLMMSDYKVEM+NDGMQEF+VDFHGP +SPYHGGVWRIRVELPDAYPYK
Sbjct: 3   SPSKRREMDLMKLMMSDYKVEMVNDGMQEFYVDFHGPGDSPYHGGVWRIRVELPDAYPYK 62

Query: 380 SPSVGFVNKIYHPNVDEVSGSVCLDVINQTWSPMFDLVNVFE 505
           SPS+GFVNKIYHPNVDE+SGSVCLDVINQTWSPMFDLVNVFE
Sbjct: 63  SPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFE 104



 Score = 84.3 bits (207), Expect(2) = 2e-71
 Identities = 40/43 (93%), Positives = 41/43 (95%)
 Frame = +3

Query: 570 DLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDKSTYEQRVK 698
           DLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRD+  YEQRVK
Sbjct: 98  DLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVK 140


>ref|XP_002276343.1| PREDICTED: ubiquitin-conjugating enzyme E2 5 [Vitis vinifera]
           gi|147789691|emb|CAN74060.1| hypothetical protein
           VITISV_024680 [Vitis vinifera]
           gi|297745317|emb|CBI40397.3| unnamed protein product
           [Vitis vinifera]
          Length = 184

 Score =  210 bits (534), Expect(2) = 3e-71
 Identities = 96/102 (94%), Positives = 101/102 (99%)
 Frame = +2

Query: 200 SPSKRREMDLMKLMMSDYKVEMINDGMQEFFVDFHGPTESPYHGGVWRIRVELPDAYPYK 379
           SPSKRREMDLMKLMMSDYKVEMINDGMQEF+V FHGP++SPYHGGVWRIRVELPDAYPYK
Sbjct: 3   SPSKRREMDLMKLMMSDYKVEMINDGMQEFYVHFHGPSDSPYHGGVWRIRVELPDAYPYK 62

Query: 380 SPSVGFVNKIYHPNVDEVSGSVCLDVINQTWSPMFDLVNVFE 505
           SPS+GFVNKIYHPNVDE+SGSVCLDVINQTWSPMFDLVNVFE
Sbjct: 63  SPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFE 104



 Score = 85.1 bits (209), Expect(2) = 3e-71
 Identities = 40/43 (93%), Positives = 42/43 (97%)
 Frame = +3

Query: 570 DLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDKSTYEQRVK 698
           DLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRD++ YEQRVK
Sbjct: 98  DLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRTAYEQRVK 140


>ref|XP_002511883.1| ubiquitin-conjugating enzyme h, putative [Ricinus communis]
           gi|223549063|gb|EEF50552.1| ubiquitin-conjugating enzyme
           h, putative [Ricinus communis]
          Length = 183

 Score =  209 bits (533), Expect(2) = 6e-71
 Identities = 96/102 (94%), Positives = 100/102 (98%)
 Frame = +2

Query: 200 SPSKRREMDLMKLMMSDYKVEMINDGMQEFFVDFHGPTESPYHGGVWRIRVELPDAYPYK 379
           SPSKRREMDLMKLMMSDYKVEMINDGMQEF+V FHGP +SPYHGGVWRIRVELPDAYPYK
Sbjct: 3   SPSKRREMDLMKLMMSDYKVEMINDGMQEFYVHFHGPNDSPYHGGVWRIRVELPDAYPYK 62

Query: 380 SPSVGFVNKIYHPNVDEVSGSVCLDVINQTWSPMFDLVNVFE 505
           SPS+GFVNKIYHPNVDE+SGSVCLDVINQTWSPMFDLVNVFE
Sbjct: 63  SPSIGFVNKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFE 104



 Score = 84.3 bits (207), Expect(2) = 6e-71
 Identities = 40/43 (93%), Positives = 41/43 (95%)
 Frame = +3

Query: 570 DLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDKSTYEQRVK 698
           DLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRD+  YEQRVK
Sbjct: 98  DLVNVFEVFLPQLLLYPNPSDPLNGEAAALMMRDRPAYEQRVK 140


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