BLASTX nr result

ID: Coptis24_contig00004828 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004828
         (601 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307109.1| predicted protein [Populus trichocarpa] gi|2...   325   4e-87
ref|NP_001234609.1| prephenate aminotransferase [Solanum lycoper...   320   9e-86
ref|XP_002310582.1| predicted protein [Populus trichocarpa] gi|2...   320   9e-86
emb|CBI21453.3| unnamed protein product [Vitis vinifera]              320   2e-85
ref|XP_002277000.1| PREDICTED: bifunctional aspartate aminotrans...   320   2e-85

>ref|XP_002307109.1| predicted protein [Populus trichocarpa] gi|222856558|gb|EEE94105.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score =  325 bits (833), Expect = 4e-87
 Identities = 165/200 (82%), Positives = 177/200 (88%), Gaps = 1/200 (0%)
 Frame = -3

Query: 599 DFDTPSVIAEAGINAIHEGHTRYTPNAGTFELRKAICHKLEEENGISYTPDHILVSNGAK 420
           DFDTP+VIAEAGINAI EGHTRYTPNAGT ELR AIC KL+EENGISY PD ILVSNGAK
Sbjct: 45  DFDTPAVIAEAGINAIREGHTRYTPNAGTQELRVAICQKLKEENGISYKPDQILVSNGAK 104

Query: 419 QSVLQGLFDVCSLGD-FIIPGPFYVSYREMARMPYANLVIVETSLNNNFLLDPKVLESKL 243
           QS+ Q +  VCS GD  IIP PF+VSY EMAR+  A  VI+ TS++ NFLLDPK LESKL
Sbjct: 105 QSIYQAILAVCSPGDEVIIPAPFWVSYPEMARLADATPVILPTSISENFLLDPKQLESKL 164

Query: 242 NEKSRVLILCSPSNPTGSVYPRKLMEEIAKIVAKHPRLLVLSDEIYEHIIYAPATHISFA 63
           NEKSR+LILCSPSNPTGSVYP+KL+EEIAKIVAKHPRLLVLSDEIYEHIIYAPATH SFA
Sbjct: 165 NEKSRLLILCSPSNPTGSVYPKKLLEEIAKIVAKHPRLLVLSDEIYEHIIYAPATHTSFA 224

Query: 62  SLPGMWERTLTVNGFSKAFA 3
           SLPGMWERTLTVNGFSKAFA
Sbjct: 225 SLPGMWERTLTVNGFSKAFA 244


>ref|NP_001234609.1| prephenate aminotransferase [Solanum lycopersicum]
           gi|311700557|gb|ADQ00383.1| prephenate aminotransferase
           [Solanum lycopersicum]
          Length = 480

 Score =  320 bits (821), Expect = 9e-86
 Identities = 158/200 (79%), Positives = 179/200 (89%), Gaps = 1/200 (0%)
 Frame = -3

Query: 599 DFDTPSVIAEAGINAIHEGHTRYTPNAGTFELRKAICHKLEEENGISYTPDHILVSNGAK 420
           DFDTP+ IAEAGINAI EGHTRYTPNAGT ELR AICHKL+EENG+SYTPD I+VSNGAK
Sbjct: 115 DFDTPAPIAEAGINAIREGHTRYTPNAGTMELRSAICHKLKEENGLSYTPDQIVVSNGAK 174

Query: 419 QSVLQGLFDVCSLGD-FIIPGPFYVSYREMARMPYANLVIVETSLNNNFLLDPKVLESKL 243
           QS++Q +  VCS GD  +IP P++VSY EMARM  A  VI+ TS++ +FLLDPK+LESKL
Sbjct: 175 QSIVQAVLAVCSPGDEVLIPAPYWVSYPEMARMADAMPVILPTSISEDFLLDPKLLESKL 234

Query: 242 NEKSRVLILCSPSNPTGSVYPRKLMEEIAKIVAKHPRLLVLSDEIYEHIIYAPATHISFA 63
            EKSR+LILCSPSNPTGSVYPRKL+EEIA+IVA+HPRLLV+SDEIYEHIIYAPATH SFA
Sbjct: 235 TEKSRLLILCSPSNPTGSVYPRKLLEEIAEIVARHPRLLVISDEIYEHIIYAPATHTSFA 294

Query: 62  SLPGMWERTLTVNGFSKAFA 3
           SLPGMW+RTLTVNGFSKAFA
Sbjct: 295 SLPGMWDRTLTVNGFSKAFA 314


>ref|XP_002310582.1| predicted protein [Populus trichocarpa] gi|222853485|gb|EEE91032.1|
           predicted protein [Populus trichocarpa]
          Length = 410

 Score =  320 bits (821), Expect = 9e-86
 Identities = 163/200 (81%), Positives = 177/200 (88%), Gaps = 1/200 (0%)
 Frame = -3

Query: 599 DFDTPSVIAEAGINAIHEGHTRYTPNAGTFELRKAICHKLEEENGISYTPDHILVSNGAK 420
           DFDTP VIAEAGINAI EG TRYTPNAGT ELR AICHKL+EENGISYTPD ILVSNGAK
Sbjct: 45  DFDTPVVIAEAGINAIREGFTRYTPNAGTQELRVAICHKLKEENGISYTPDQILVSNGAK 104

Query: 419 QSVLQGLFDVCSLGD-FIIPGPFYVSYREMARMPYANLVIVETSLNNNFLLDPKVLESKL 243
           QS+ Q +  VCS GD  IIP PF+VSY EMAR+  A  VI+ TS++ NFLLDPK+LESKL
Sbjct: 105 QSIYQAMLAVCSPGDEVIIPAPFWVSYPEMARLADATPVILPTSISENFLLDPKLLESKL 164

Query: 242 NEKSRVLILCSPSNPTGSVYPRKLMEEIAKIVAKHPRLLVLSDEIYEHIIYAPATHISFA 63
           + KSR+LILCSPSNPTGSVY +KL+EEIA+IVAKHPRLLVLSDEIYEHIIYAPATHISFA
Sbjct: 165 SAKSRLLILCSPSNPTGSVYSKKLLEEIARIVAKHPRLLVLSDEIYEHIIYAPATHISFA 224

Query: 62  SLPGMWERTLTVNGFSKAFA 3
           SLPGMWERTLTVNGFSKAFA
Sbjct: 225 SLPGMWERTLTVNGFSKAFA 244


>emb|CBI21453.3| unnamed protein product [Vitis vinifera]
          Length = 476

 Score =  320 bits (819), Expect = 2e-85
 Identities = 160/200 (80%), Positives = 177/200 (88%), Gaps = 1/200 (0%)
 Frame = -3

Query: 599 DFDTPSVIAEAGINAIHEGHTRYTPNAGTFELRKAICHKLEEENGISYTPDHILVSNGAK 420
           DFDTP+VIAEAGINAI EG+TRYTPNAGT E+R AICHKL+EENG+SYTPD ILVSNGAK
Sbjct: 111 DFDTPAVIAEAGINAIREGYTRYTPNAGTLEVRSAICHKLKEENGLSYTPDEILVSNGAK 170

Query: 419 QSVLQGLFDVCSLGD-FIIPGPFYVSYREMARMPYANLVIVETSLNNNFLLDPKVLESKL 243
           QS+LQ +  VCS GD  IIP PF+VSY EMAR+  A  VI+ T ++ NFLLDPK LESKL
Sbjct: 171 QSILQAVLAVCSPGDEVIIPAPFWVSYPEMARLADATPVILPTLISENFLLDPKFLESKL 230

Query: 242 NEKSRVLILCSPSNPTGSVYPRKLMEEIAKIVAKHPRLLVLSDEIYEHIIYAPATHISFA 63
            EKSR+LILCSPSNPTGSVY RKL+EEIA+IVA+HPRLLVLSDEIYEHIIYAPATH SFA
Sbjct: 231 TEKSRLLILCSPSNPTGSVYSRKLLEEIAQIVARHPRLLVLSDEIYEHIIYAPATHTSFA 290

Query: 62  SLPGMWERTLTVNGFSKAFA 3
           +LPGMWERTLTVNGFSKAFA
Sbjct: 291 ALPGMWERTLTVNGFSKAFA 310


>ref|XP_002277000.1| PREDICTED: bifunctional aspartate aminotransferase and
           glutamate/aspartate-prephenate aminotransferase [Vitis
           vinifera]
          Length = 410

 Score =  320 bits (819), Expect = 2e-85
 Identities = 160/200 (80%), Positives = 177/200 (88%), Gaps = 1/200 (0%)
 Frame = -3

Query: 599 DFDTPSVIAEAGINAIHEGHTRYTPNAGTFELRKAICHKLEEENGISYTPDHILVSNGAK 420
           DFDTP+VIAEAGINAI EG+TRYTPNAGT E+R AICHKL+EENG+SYTPD ILVSNGAK
Sbjct: 45  DFDTPAVIAEAGINAIREGYTRYTPNAGTLEVRSAICHKLKEENGLSYTPDEILVSNGAK 104

Query: 419 QSVLQGLFDVCSLGD-FIIPGPFYVSYREMARMPYANLVIVETSLNNNFLLDPKVLESKL 243
           QS+LQ +  VCS GD  IIP PF+VSY EMAR+  A  VI+ T ++ NFLLDPK LESKL
Sbjct: 105 QSILQAVLAVCSPGDEVIIPAPFWVSYPEMARLADATPVILPTLISENFLLDPKFLESKL 164

Query: 242 NEKSRVLILCSPSNPTGSVYPRKLMEEIAKIVAKHPRLLVLSDEIYEHIIYAPATHISFA 63
            EKSR+LILCSPSNPTGSVY RKL+EEIA+IVA+HPRLLVLSDEIYEHIIYAPATH SFA
Sbjct: 165 TEKSRLLILCSPSNPTGSVYSRKLLEEIAQIVARHPRLLVLSDEIYEHIIYAPATHTSFA 224

Query: 62  SLPGMWERTLTVNGFSKAFA 3
           +LPGMWERTLTVNGFSKAFA
Sbjct: 225 ALPGMWERTLTVNGFSKAFA 244


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