BLASTX nr result

ID: Coptis24_contig00004814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004814
         (981 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004152209.1| PREDICTED: uncharacterized protein At1g15400...   112   2e-22
ref|XP_002304148.1| predicted protein [Populus trichocarpa] gi|2...   108   2e-21
ref|XP_002285079.1| PREDICTED: uncharacterized protein At1g15400...   104   4e-20
gb|ABD28396.1| hypothetical protein MtrDRAFT_AC148340g12v2 [Medi...   102   1e-19
ref|XP_003597862.1| hypothetical protein MTR_2g103380 [Medicago ...   102   1e-19

>ref|XP_004152209.1| PREDICTED: uncharacterized protein At1g15400-like [Cucumis sativus]
           gi|449484181|ref|XP_004156808.1| PREDICTED:
           uncharacterized protein At1g15400-like [Cucumis sativus]
          Length = 120

 Score =  112 bits (279), Expect = 2e-22
 Identities = 61/123 (49%), Positives = 72/123 (58%)
 Frame = +3

Query: 282 MAGLQRSAISFRRQGSSGLVWEDPLASXXXXXXXXXXXXXXXXXXXXXXXFRELRQSKSV 461
           M GLQRSA+SFRRQGSSGLVW+D   S                             +   
Sbjct: 1   MEGLQRSAVSFRRQGSSGLVWDDRFLSGELKQTATTSEKESEENQDQGKSTAAAAAAAVE 60

Query: 462 GSIKMIERSRSNGGRGYRTGKVTPSLDPPSPKVSACGFCSVFSKPVGDHRSKTKNGRTGK 641
                IERSRSNGGRGYRTGKV+P+++PPSPKVSACGFCS F KP      K++  +TGK
Sbjct: 61  PISITIERSRSNGGRGYRTGKVSPAIEPPSPKVSACGFCSAFGKPA----KKSRRTKTGK 116

Query: 642 RKS 650
           R+S
Sbjct: 117 RRS 119


>ref|XP_002304148.1| predicted protein [Populus trichocarpa] gi|222841580|gb|EEE79127.1|
           predicted protein [Populus trichocarpa]
          Length = 126

 Score =  108 bits (271), Expect = 2e-21
 Identities = 63/126 (50%), Positives = 75/126 (59%), Gaps = 8/126 (6%)
 Frame = +3

Query: 282 MAGLQRSAISFRRQGSSGLVWEDPLASXXXXXXXXXXXXXXXXXXXXXXX-------FRE 440
           MAGLQRSA+SFRRQGSSGLVW+D L S                               R 
Sbjct: 1   MAGLQRSAMSFRRQGSSGLVWDDKLISGELNKVNQKQEHEEQEPQHDQKTDIKLENDVRP 60

Query: 441 LRQSKSVGSIKMIERSRSNGG-RGYRTGKVTPSLDPPSPKVSACGFCSVFSKPVGDHRSK 617
             +S +  SI  IERSRSNGG RGYRTG+V+P+++PPSPKVSACGFC  F KP  + R K
Sbjct: 61  TSRSSTTPSIT-IERSRSNGGQRGYRTGRVSPAIEPPSPKVSACGFCGAFGKPAKNRRKK 119

Query: 618 TKNGRT 635
           +  GR+
Sbjct: 120 SGKGRS 125


>ref|XP_002285079.1| PREDICTED: uncharacterized protein At1g15400 [Vitis vinifera]
          Length = 114

 Score =  104 bits (259), Expect = 4e-20
 Identities = 58/123 (47%), Positives = 70/123 (56%)
 Frame = +3

Query: 282 MAGLQRSAISFRRQGSSGLVWEDPLASXXXXXXXXXXXXXXXXXXXXXXXFRELRQSKSV 461
           MAGLQRS ISFRRQGSSG VW+D   +                         E + S+S 
Sbjct: 1   MAGLQRSEISFRRQGSSGSVWDDKFLAGALNQAKQNDQEEEQKAEAG-----EAKLSQSP 55

Query: 462 GSIKMIERSRSNGGRGYRTGKVTPSLDPPSPKVSACGFCSVFSKPVGDHRSKTKNGRTGK 641
             I ++ERSRSNGG+ Y+T KV P++DPPSP+VS CG C VF KPV  H       + GK
Sbjct: 56  APISVMERSRSNGGQAYKTVKVAPAIDPPSPRVSGCGLCGVFGKPVKSHH----RPKRGK 111

Query: 642 RKS 650
           RKS
Sbjct: 112 RKS 114


>gb|ABD28396.1| hypothetical protein MtrDRAFT_AC148340g12v2 [Medicago truncatula]
           gi|217071550|gb|ACJ84135.1| unknown [Medicago
           truncatula] gi|217075450|gb|ACJ86085.1| unknown
           [Medicago truncatula] gi|388522251|gb|AFK49187.1|
           unknown [Medicago truncatula]
          Length = 118

 Score =  102 bits (255), Expect = 1e-19
 Identities = 54/116 (46%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
 Frame = +3

Query: 282 MAGLQRSAISFRRQGSSGLVWEDPLASXXXXXXXXXXXXXXXXXXXXXXXFRELRQSKSV 461
           M GLQRSA+SFRRQGSSG VW+D                                 S  +
Sbjct: 1   MEGLQRSAVSFRRQGSSGFVWDDRFLQEEINKMNQNQNQQEQEDKDEIKEMNRDATSPQL 60

Query: 462 GSIKMIERSRSNGG-RGYRTGKVTPSLDPPSPKVSACGFCSVFSKPVGDHRSKTKN 626
           G I  ++RSRSNGG RGYRTGKV+P+++PPSP++SACGFC  F K VG+ R   K+
Sbjct: 61  GPINTVQRSRSNGGGRGYRTGKVSPAIEPPSPRISACGFCGAFGK-VGEKRKPPKH 115


>ref|XP_003597862.1| hypothetical protein MTR_2g103380 [Medicago truncatula]
           gi|355486910|gb|AES68113.1| hypothetical protein
           MTR_2g103380 [Medicago truncatula]
          Length = 128

 Score =  102 bits (255), Expect = 1e-19
 Identities = 54/116 (46%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
 Frame = +3

Query: 282 MAGLQRSAISFRRQGSSGLVWEDPLASXXXXXXXXXXXXXXXXXXXXXXXFRELRQSKSV 461
           M GLQRSA+SFRRQGSSG VW+D                                 S  +
Sbjct: 1   MEGLQRSAVSFRRQGSSGFVWDDRFLQEEINKMNQNQNQQEQEDKDEIKEMNRDATSPQL 60

Query: 462 GSIKMIERSRSNGG-RGYRTGKVTPSLDPPSPKVSACGFCSVFSKPVGDHRSKTKN 626
           G I  ++RSRSNGG RGYRTGKV+P+++PPSP++SACGFC  F K VG+ R   K+
Sbjct: 61  GPINTVQRSRSNGGGRGYRTGKVSPAIEPPSPRISACGFCGAFGK-VGEKRKPPKH 115


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