BLASTX nr result

ID: Coptis24_contig00004803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004803
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002509881.1| conserved hypothetical protein [Ricinus comm...   188   3e-46
ref|XP_002299504.1| predicted protein [Populus trichocarpa] gi|1...   184   6e-45
gb|AFK41983.1| unknown [Medicago truncatula]                          184   8e-45
gb|ACJ84486.1| unknown [Medicago truncatula] gi|388496820|gb|AFK...   184   8e-45
ref|XP_002277080.2| PREDICTED: uncharacterized protein LOC100267...   183   1e-44

>ref|XP_002509881.1| conserved hypothetical protein [Ricinus communis]
           gi|223549780|gb|EEF51268.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 260

 Score =  188 bits (478), Expect = 3e-46
 Identities = 98/154 (63%), Positives = 110/154 (71%)
 Frame = +2

Query: 2   FIKKSPPQIPNVHLPEKPVLEVASALRNEVNCALSVLHNIASGRDLXXXXXXXXXXXXXX 181
           FI KSPP IP VH+PE+PVL+VA+ALR E+N A ++L +IASGRDL              
Sbjct: 131 FINKSPPHIPEVHIPEEPVLQVAAALRMEINYAFAILRDIASGRDLKKFLS--------- 181

Query: 182 XXXXXXXXXXXXXXXXXVIAGLWVLSVVGSWCNFVTLFYIVFVLLLTVPILYEKYEDKID 361
                            VIAGLWVLS+VGSWCNF+TLFYI FVLL TVP+ YEKYEDK+D
Sbjct: 182 -----------------VIAGLWVLSIVGSWCNFLTLFYIAFVLLHTVPVFYEKYEDKVD 224

Query: 362 PFAEKAMHEIKKQYAVFDAKVLSKIPRGPLKDKK 463
            FAEKA  EIKKQYAVFDAKVLSKIPRGPLKDKK
Sbjct: 225 AFAEKAAIEIKKQYAVFDAKVLSKIPRGPLKDKK 258


>ref|XP_002299504.1| predicted protein [Populus trichocarpa] gi|118482989|gb|ABK93406.1|
           unknown [Populus trichocarpa]
           gi|222846762|gb|EEE84309.1| predicted protein [Populus
           trichocarpa]
          Length = 254

 Score =  184 bits (467), Expect = 6e-45
 Identities = 98/154 (63%), Positives = 109/154 (70%)
 Frame = +2

Query: 2   FIKKSPPQIPNVHLPEKPVLEVASALRNEVNCALSVLHNIASGRDLXXXXXXXXXXXXXX 181
           FI KSPP+IP V +PE+PVL+ A+ALR E+N   SVL +IASGRDL              
Sbjct: 125 FINKSPPRIPEVCIPEEPVLQTAAALRIEINQGFSVLRDIASGRDLKNFLT--------- 175

Query: 182 XXXXXXXXXXXXXXXXXVIAGLWVLSVVGSWCNFVTLFYIVFVLLLTVPILYEKYEDKID 361
                            VIAGLWVLS+VGSWCNFVTLFYI FVLL TVP+ YEKYED++D
Sbjct: 176 -----------------VIAGLWVLSIVGSWCNFVTLFYIAFVLLHTVPVFYEKYEDQVD 218

Query: 362 PFAEKAMHEIKKQYAVFDAKVLSKIPRGPLKDKK 463
            FAEKAM EIKKQYAVFDAKVLSKIPRGPLKDKK
Sbjct: 219 AFAEKAMIEIKKQYAVFDAKVLSKIPRGPLKDKK 252


>gb|AFK41983.1| unknown [Medicago truncatula]
          Length = 237

 Score =  184 bits (466), Expect = 8e-45
 Identities = 93/154 (60%), Positives = 110/154 (71%)
 Frame = +2

Query: 2   FIKKSPPQIPNVHLPEKPVLEVASALRNEVNCALSVLHNIASGRDLXXXXXXXXXXXXXX 181
           FI KSPP+IP VH+PE+PVL++ASA+R E+N A ++L +IASGRDL              
Sbjct: 108 FINKSPPKIPQVHIPEEPVLQIASAIRIEINRAFAILRDIASGRDLKQFLS--------- 158

Query: 182 XXXXXXXXXXXXXXXXXVIAGLWVLSVVGSWCNFVTLFYIVFVLLLTVPILYEKYEDKID 361
                            VIAGLWVLS+VGSW NF+TLFYI FVLL TVP+LYEKYED++D
Sbjct: 159 -----------------VIAGLWVLSIVGSWTNFLTLFYIAFVLLHTVPVLYEKYEDRVD 201

Query: 362 PFAEKAMHEIKKQYAVFDAKVLSKIPRGPLKDKK 463
            F EKA+HE KKQYAVFD KVLSKIP+GPLKDKK
Sbjct: 202 SFGEKALHEFKKQYAVFDEKVLSKIPKGPLKDKK 235


>gb|ACJ84486.1| unknown [Medicago truncatula] gi|388496820|gb|AFK36476.1| unknown
           [Medicago truncatula]
          Length = 260

 Score =  184 bits (466), Expect = 8e-45
 Identities = 93/154 (60%), Positives = 110/154 (71%)
 Frame = +2

Query: 2   FIKKSPPQIPNVHLPEKPVLEVASALRNEVNCALSVLHNIASGRDLXXXXXXXXXXXXXX 181
           FI KSPP+IP VH+PE+PVL++ASA+R E+N A ++L +IASGRDL              
Sbjct: 131 FINKSPPKIPQVHIPEEPVLQIASAIRIEINRAFAILRDIASGRDLKQFLS--------- 181

Query: 182 XXXXXXXXXXXXXXXXXVIAGLWVLSVVGSWCNFVTLFYIVFVLLLTVPILYEKYEDKID 361
                            VIAGLWVLS+VGSW NF+TLFYI FVLL TVP+LYEKYED++D
Sbjct: 182 -----------------VIAGLWVLSIVGSWTNFLTLFYIAFVLLHTVPVLYEKYEDRVD 224

Query: 362 PFAEKAMHEIKKQYAVFDAKVLSKIPRGPLKDKK 463
            F EKA+HE KKQYAVFD KVLSKIP+GPLKDKK
Sbjct: 225 SFGEKALHEFKKQYAVFDEKVLSKIPKGPLKDKK 258


>ref|XP_002277080.2| PREDICTED: uncharacterized protein LOC100267262 [Vitis vinifera]
          Length = 256

 Score =  183 bits (465), Expect = 1e-44
 Identities = 94/155 (60%), Positives = 110/155 (70%)
 Frame = +2

Query: 2   FIKKSPPQIPNVHLPEKPVLEVASALRNEVNCALSVLHNIASGRDLXXXXXXXXXXXXXX 181
           FI K+PP IP VH+PE PVL+ ASALR E+N   ++L N+ASG+DL              
Sbjct: 127 FINKAPPHIPEVHIPEDPVLQFASALRIEINRGFTLLRNVASGKDLKKFLS--------- 177

Query: 182 XXXXXXXXXXXXXXXXXVIAGLWVLSVVGSWCNFVTLFYIVFVLLLTVPILYEKYEDKID 361
                            VIAGLWV+S+VGSWCNF+TLFYIVFVLL TVP+LYEKYED +D
Sbjct: 178 -----------------VIAGLWVVSIVGSWCNFLTLFYIVFVLLHTVPVLYEKYEDPVD 220

Query: 362 PFAEKAMHEIKKQYAVFDAKVLSKIPRGPLKDKKL 466
            FAEKAM EIK+QYAVFDAKVLS+IPRGPLKDKK+
Sbjct: 221 SFAEKAMVEIKRQYAVFDAKVLSRIPRGPLKDKKI 255


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