BLASTX nr result

ID: Coptis24_contig00004795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004795
         (1013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285175.1| PREDICTED: actin-depolymerizing factor [Viti...   229   6e-58
gb|ADB85088.1| actin-depolymerizing factor 6 [Jatropha curcas]        224   2e-56
ref|XP_002524620.1| actin depolymerizing factor, putative [Ricin...   224   3e-56
ref|XP_002300779.1| predicted protein [Populus trichocarpa] gi|1...   223   4e-56
gb|AAD23407.1| actin depolymerizing factor [Populus tremula x Po...   223   6e-56

>ref|XP_002285175.1| PREDICTED: actin-depolymerizing factor [Vitis vinifera]
           gi|296083652|emb|CBI23641.3| unnamed protein product
           [Vitis vinifera]
          Length = 143

 Score =  229 bits (585), Expect = 6e-58
 Identities = 113/143 (79%), Positives = 123/143 (86%)
 Frame = -3

Query: 867 MAFRMSNASSGMGVADHSTSTFLELKRKKVHRYXXXXXXXXXXXXXXXKTGGPAESYDDF 688
           M+FR SNASSGMGVADH  +T+LEL+RKKVHRY               KTGGPAESYDDF
Sbjct: 1   MSFRGSNASSGMGVADHCKATYLELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYDDF 60

Query: 687 TASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPATSRIRAKMLYATSKDRFRRVLDG 508
           TASLP+NDCRYA+YDFDFVTSENCQKSKIFFIAWSP+ SRIRAKMLYATSKDRFRR L+G
Sbjct: 61  TASLPENDCRYAIYDFDFVTSENCQKSKIFFIAWSPSVSRIRAKMLYATSKDRFRRELEG 120

Query: 507 IHYEIQATDPSEMELEVLRERAN 439
           IHYEIQATDP+EM+LEVLRERAN
Sbjct: 121 IHYEIQATDPTEMDLEVLRERAN 143


>gb|ADB85088.1| actin-depolymerizing factor 6 [Jatropha curcas]
          Length = 146

 Score =  224 bits (572), Expect = 2e-56
 Identities = 113/146 (77%), Positives = 123/146 (84%), Gaps = 3/146 (2%)
 Frame = -3

Query: 867 MAFR---MSNASSGMGVADHSTSTFLELKRKKVHRYXXXXXXXXXXXXXXXKTGGPAESY 697
           M+FR     NA+SGMGVADHS +TFLEL+RKKVHRY               KTGGPAESY
Sbjct: 1   MSFRGLSRPNATSGMGVADHSINTFLELQRKKVHRYVVFRIDEKKKEVVVEKTGGPAESY 60

Query: 696 DDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPATSRIRAKMLYATSKDRFRRV 517
           +DF ASLP+NDCRYAVYDFDFVTSENCQKSKIFFIAWSP+TSRIRAKMLYATSKDRFRR 
Sbjct: 61  EDFAASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRE 120

Query: 516 LDGIHYEIQATDPSEMELEVLRERAN 439
           LDGIHYEIQATDP+EM+LEV+RERAN
Sbjct: 121 LDGIHYEIQATDPTEMDLEVIRERAN 146


>ref|XP_002524620.1| actin depolymerizing factor, putative [Ricinus communis]
           gi|223536173|gb|EEF37828.1| actin depolymerizing factor,
           putative [Ricinus communis]
          Length = 146

 Score =  224 bits (571), Expect = 3e-56
 Identities = 113/146 (77%), Positives = 122/146 (83%), Gaps = 3/146 (2%)
 Frame = -3

Query: 867 MAFR---MSNASSGMGVADHSTSTFLELKRKKVHRYXXXXXXXXXXXXXXXKTGGPAESY 697
           M+FR     NA+SGMGVADHS +TFLEL+RKKVHRY               KTGGPAESY
Sbjct: 1   MSFRGISRPNATSGMGVADHSINTFLELQRKKVHRYVVFKIDEKKKEVVVEKTGGPAESY 60

Query: 696 DDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPATSRIRAKMLYATSKDRFRRV 517
           +DF ASLPDNDCRYAVYDFDFVTSENCQKSKIFF AWSP+TSRIRAKMLYATSKDRFRR 
Sbjct: 61  EDFAASLPDNDCRYAVYDFDFVTSENCQKSKIFFFAWSPSTSRIRAKMLYATSKDRFRRQ 120

Query: 516 LDGIHYEIQATDPSEMELEVLRERAN 439
           LDGIHYEIQATDP+EM+LEVLR+RAN
Sbjct: 121 LDGIHYEIQATDPTEMDLEVLRDRAN 146


>ref|XP_002300779.1| predicted protein [Populus trichocarpa] gi|118482922|gb|ABK93374.1|
           unknown [Populus trichocarpa]
           gi|118484750|gb|ABK94244.1| unknown [Populus
           trichocarpa] gi|222842505|gb|EEE80052.1| predicted
           protein [Populus trichocarpa]
          Length = 146

 Score =  223 bits (569), Expect = 4e-56
 Identities = 113/146 (77%), Positives = 123/146 (84%), Gaps = 3/146 (2%)
 Frame = -3

Query: 867 MAFRMS---NASSGMGVADHSTSTFLELKRKKVHRYXXXXXXXXXXXXXXXKTGGPAESY 697
           M+FR +   NASSGMGVADHS   F+EL+RKKVHRY               KTGGPAESY
Sbjct: 1   MSFRGASRPNASSGMGVADHSKIAFVELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESY 60

Query: 696 DDFTASLPDNDCRYAVYDFDFVTSENCQKSKIFFIAWSPATSRIRAKMLYATSKDRFRRV 517
           +DFTASLP+NDCRYAVYDFDFVTSENCQKSKIFFIAWSP+TSRIRAKMLYATSKDRFRR 
Sbjct: 61  EDFTASLPENDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRE 120

Query: 516 LDGIHYEIQATDPSEMELEVLRERAN 439
           LDGIHYEIQATDP+EM+LEV+RERAN
Sbjct: 121 LDGIHYEIQATDPTEMDLEVIRERAN 146


>gb|AAD23407.1| actin depolymerizing factor [Populus tremula x Populus alba]
          Length = 138

 Score =  223 bits (568), Expect = 6e-56
 Identities = 110/137 (80%), Positives = 118/137 (86%)
 Frame = -3

Query: 849 NASSGMGVADHSTSTFLELKRKKVHRYXXXXXXXXXXXXXXXKTGGPAESYDDFTASLPD 670
           NASSGMGVADHS   F+EL+RKKVHRY               KTGGPAESY+DFTASLP+
Sbjct: 2   NASSGMGVADHSKIAFVELQRKKVHRYVIFKIDEKKKEVVVEKTGGPAESYEDFTASLPE 61

Query: 669 NDCRYAVYDFDFVTSENCQKSKIFFIAWSPATSRIRAKMLYATSKDRFRRVLDGIHYEIQ 490
           NDCRYAVYDFDFVTSENCQKSKIFFIAWSP+TSRIRAKMLYATSKDRFRR LDGIHYEIQ
Sbjct: 62  NDCRYAVYDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATSKDRFRRELDGIHYEIQ 121

Query: 489 ATDPSEMELEVLRERAN 439
           ATDP+EM+LEV+RERAN
Sbjct: 122 ATDPTEMDLEVIRERAN 138


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