BLASTX nr result

ID: Coptis24_contig00004787 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004787
         (3007 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512973.1| xylulose kinase, putative [Ricinus communis]...   345   5e-92
ref|XP_002265772.2| PREDICTED: xylulose kinase-like [Vitis vinif...   339   3e-90
emb|CBI38013.3| unnamed protein product [Vitis vinifera]              339   3e-90
emb|CAN73654.1| hypothetical protein VITISV_005731 [Vitis vinifera]   339   3e-90
ref|XP_002313768.1| predicted protein [Populus trichocarpa] gi|2...   338   7e-90

>ref|XP_002512973.1| xylulose kinase, putative [Ricinus communis]
           gi|223547984|gb|EEF49476.1| xylulose kinase, putative
           [Ricinus communis]
          Length = 435

 Score =  345 bits (884), Expect = 5e-92
 Identities = 167/242 (69%), Positives = 198/242 (81%)
 Frame = -2

Query: 789 QVGYDPEINSYPKWPVSQPYSHMLPSVIAPRTSVGSMKEDVRVQFGFPKECVICTGTTDS 610
           +VGYDPE++SYP W ++QP+S +LPSV AP +S+G +KED+R+Q+GFP++CV+CTGTTDS
Sbjct: 181 KVGYDPELDSYPPWLLAQPFSQILPSVTAPGSSIGCLKEDIRIQYGFPEDCVVCTGTTDS 240

Query: 609 ITAFLAACATQPGKAVTSLGSTLAVKLLSTR*VDDSRYEVYSHRLDDRWLVGGASNTGGA 430
           I AFLAA ATQPGKAVTSLGSTLA+KLLST  ++D+R+ VYSHRLDD+WLVGGASNTGGA
Sbjct: 241 IAAFLAARATQPGKAVTSLGSTLAIKLLSTSRIEDARFGVYSHRLDDKWLVGGASNTGGA 300

Query: 429 VLRQIFTDDQLGKLSQQIDPKRSSPHDYYPLPAVGERFPVADPEMPPSPKCWHSCKQGPR 250
           VLRQ+FTD+QL KLS+QIDP ++SP DYYPL AVGERFPVADP + P             
Sbjct: 301 VLRQLFTDEQLEKLSEQIDPLKASPLDYYPLKAVGERFPVADPNLSPR------------ 348

Query: 249 PQSGPCQGLHPRPANDAEYLHGILESIARIEAKAYGLLKDLGATPVEEVFTAGGGAKNEK 70
                   L+PRP +D EYLHGILESIARIEAK Y LLKD+GAT  EEVFTAGGGAKNEK
Sbjct: 349 --------LNPRPESDVEYLHGILESIARIEAKGYNLLKDMGATQAEEVFTAGGGAKNEK 400

Query: 69  WT 64
           WT
Sbjct: 401 WT 402


>ref|XP_002265772.2| PREDICTED: xylulose kinase-like [Vitis vinifera]
          Length = 447

 Score =  339 bits (869), Expect = 3e-90
 Identities = 169/241 (70%), Positives = 193/241 (80%)
 Frame = -2

Query: 789 QVGYDPEINSYPKWPVSQPYSHMLPSVIAPRTSVGSMKEDVRVQFGFPKECVICTGTTDS 610
           +VGYDPE +SYP W +SQPYS +LPSV AP  S+G ++ED+R QFGFPK+CV+CTGTTDS
Sbjct: 188 KVGYDPEHDSYPSWLLSQPYSRVLPSVKAPGASIGYLQEDIRTQFGFPKDCVVCTGTTDS 247

Query: 609 ITAFLAACATQPGKAVTSLGSTLAVKLLSTR*VDDSRYEVYSHRLDDRWLVGGASNTGGA 430
           I AFLAA ATQPGKAVTSLGSTLA+KLLST  ++D+R+ VYSHRLDD+WLVGGASNTGGA
Sbjct: 248 IAAFLAARATQPGKAVTSLGSTLAIKLLSTSRIEDARFGVYSHRLDDKWLVGGASNTGGA 307

Query: 429 VLRQIFTDDQLGKLSQQIDPKRSSPHDYYPLPAVGERFPVADPEMPPSPKCWHSCKQGPR 250
           VLRQIFTD+QL KLS+QI+P  +SP DYYPL AVGERFPVADP+M P             
Sbjct: 308 VLRQIFTDEQLEKLSEQINPMEASPLDYYPLHAVGERFPVADPKMVPR------------ 355

Query: 249 PQSGPCQGLHPRPANDAEYLHGILESIARIEAKAYGLLKDLGATPVEEVFTAGGGAKNEK 70
                   L PRP +D EYLHGILESIARIEAKAY LLKD+GAT V+EVFTAGGGAKN  
Sbjct: 356 --------LQPRPESDVEYLHGILESIARIEAKAYSLLKDMGATQVDEVFTAGGGAKNRT 407

Query: 69  W 67
           W
Sbjct: 408 W 408


>emb|CBI38013.3| unnamed protein product [Vitis vinifera]
          Length = 518

 Score =  339 bits (869), Expect = 3e-90
 Identities = 169/241 (70%), Positives = 193/241 (80%)
 Frame = -2

Query: 789 QVGYDPEINSYPKWPVSQPYSHMLPSVIAPRTSVGSMKEDVRVQFGFPKECVICTGTTDS 610
           +VGYDPE +SYP W +SQPYS +LPSV AP  S+G ++ED+R QFGFPK+CV+CTGTTDS
Sbjct: 259 KVGYDPEHDSYPSWLLSQPYSRVLPSVKAPGASIGYLQEDIRTQFGFPKDCVVCTGTTDS 318

Query: 609 ITAFLAACATQPGKAVTSLGSTLAVKLLSTR*VDDSRYEVYSHRLDDRWLVGGASNTGGA 430
           I AFLAA ATQPGKAVTSLGSTLA+KLLST  ++D+R+ VYSHRLDD+WLVGGASNTGGA
Sbjct: 319 IAAFLAARATQPGKAVTSLGSTLAIKLLSTSRIEDARFGVYSHRLDDKWLVGGASNTGGA 378

Query: 429 VLRQIFTDDQLGKLSQQIDPKRSSPHDYYPLPAVGERFPVADPEMPPSPKCWHSCKQGPR 250
           VLRQIFTD+QL KLS+QI+P  +SP DYYPL AVGERFPVADP+M P             
Sbjct: 379 VLRQIFTDEQLEKLSEQINPMEASPLDYYPLHAVGERFPVADPKMVPR------------ 426

Query: 249 PQSGPCQGLHPRPANDAEYLHGILESIARIEAKAYGLLKDLGATPVEEVFTAGGGAKNEK 70
                   L PRP +D EYLHGILESIARIEAKAY LLKD+GAT V+EVFTAGGGAKN  
Sbjct: 427 --------LQPRPESDVEYLHGILESIARIEAKAYSLLKDMGATQVDEVFTAGGGAKNRT 478

Query: 69  W 67
           W
Sbjct: 479 W 479


>emb|CAN73654.1| hypothetical protein VITISV_005731 [Vitis vinifera]
          Length = 386

 Score =  339 bits (869), Expect = 3e-90
 Identities = 169/241 (70%), Positives = 193/241 (80%)
 Frame = -2

Query: 789 QVGYDPEINSYPKWPVSQPYSHMLPSVIAPRTSVGSMKEDVRVQFGFPKECVICTGTTDS 610
           +VGYDPE +SYP W +SQPYS +LPSV AP  S+G ++ED+R QFGFPK+CV+CTGTTDS
Sbjct: 127 KVGYDPEHDSYPSWLLSQPYSRVLPSVKAPGASIGYLQEDIRTQFGFPKDCVVCTGTTDS 186

Query: 609 ITAFLAACATQPGKAVTSLGSTLAVKLLSTR*VDDSRYEVYSHRLDDRWLVGGASNTGGA 430
           I AFLAA ATQPGKAVTSLGSTLA+KLLST  ++D+R+ VYSHRLDD+WLVGGASNTGGA
Sbjct: 187 IAAFLAARATQPGKAVTSLGSTLAIKLLSTSRIEDARFGVYSHRLDDKWLVGGASNTGGA 246

Query: 429 VLRQIFTDDQLGKLSQQIDPKRSSPHDYYPLPAVGERFPVADPEMPPSPKCWHSCKQGPR 250
           VLRQIFTD+QL KLS+QI+P  +SP DYYPL AVGERFPVADP+M P             
Sbjct: 247 VLRQIFTDEQLEKLSEQINPMEASPLDYYPLHAVGERFPVADPKMVPR------------ 294

Query: 249 PQSGPCQGLHPRPANDAEYLHGILESIARIEAKAYGLLKDLGATPVEEVFTAGGGAKNEK 70
                   L PRP +D EYLHGILESIARIEAKAY LLKD+GAT V+EVFTAGGGAKN  
Sbjct: 295 --------LQPRPESDVEYLHGILESIARIEAKAYSLLKDMGATQVDEVFTAGGGAKNRT 346

Query: 69  W 67
           W
Sbjct: 347 W 347


>ref|XP_002313768.1| predicted protein [Populus trichocarpa] gi|222850176|gb|EEE87723.1|
           predicted protein [Populus trichocarpa]
          Length = 439

 Score =  338 bits (866), Expect = 7e-90
 Identities = 168/242 (69%), Positives = 191/242 (78%)
 Frame = -2

Query: 789 QVGYDPEINSYPKWPVSQPYSHMLPSVIAPRTSVGSMKEDVRVQFGFPKECVICTGTTDS 610
           +VGYDP  +SYP W  SQPYS +LPSVIAP TS+G++KED+R QFGF ++C++C GTTDS
Sbjct: 182 KVGYDPASDSYPPWLHSQPYSQLLPSVIAPGTSIGNLKEDIRTQFGFHEDCIVCAGTTDS 241

Query: 609 ITAFLAACATQPGKAVTSLGSTLAVKLLSTR*VDDSRYEVYSHRLDDRWLVGGASNTGGA 430
           I AFLAA ATQPGKAVTSLGSTLA+KLLST  +DD+R+ VYSHRLDD+WLVGGASNTGGA
Sbjct: 242 IAAFLAARATQPGKAVTSLGSTLAIKLLSTTRIDDARFGVYSHRLDDKWLVGGASNTGGA 301

Query: 429 VLRQIFTDDQLGKLSQQIDPKRSSPHDYYPLPAVGERFPVADPEMPPSPKCWHSCKQGPR 250
           VL+Q FTD+QL KLS+QI+P  +SP DYYPL AVGERFPVADP + P             
Sbjct: 302 VLKQFFTDEQLQKLSEQINPMEASPLDYYPLKAVGERFPVADPNLVPR------------ 349

Query: 249 PQSGPCQGLHPRPANDAEYLHGILESIARIEAKAYGLLKDLGATPVEEVFTAGGGAKNEK 70
                   LHPRP +D EYLHGILESIA IEA AY LLKDLGAT VEEV TAGGGAKNEK
Sbjct: 350 --------LHPRPESDVEYLHGILESIAHIEATAYNLLKDLGATQVEEVLTAGGGAKNEK 401

Query: 69  WT 64
           WT
Sbjct: 402 WT 403


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