BLASTX nr result

ID: Coptis24_contig00004784 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004784
         (3460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16839.3| unnamed protein product [Vitis vinifera]              112   5e-22
ref|XP_003537551.1| PREDICTED: uncharacterized protein LOC100800...   102   7e-19
ref|XP_003601863.1| hypothetical protein MTR_3g086220 [Medicago ...   102   7e-19
ref|XP_003552797.1| PREDICTED: uncharacterized protein LOC100802...   100   5e-18
ref|XP_002314574.1| predicted protein [Populus trichocarpa] gi|2...    95   1e-16

>emb|CBI16839.3| unnamed protein product [Vitis vinifera]
          Length = 1309

 Score =  112 bits (281), Expect = 5e-22
 Identities = 66/158 (41%), Positives = 96/158 (60%), Gaps = 8/158 (5%)
 Frame = -2

Query: 3351 VFIDTNLDTHLXXXXXXXXXVGDFKQKLLIEHPRCFPKIGEITIHSLKVRRNGCFYHLSN 3172
            VFIDT+LDTH+         V D K+K+L+EHP CF  IG+I IH+LKV+R G FYHLS+
Sbjct: 18   VFIDTSLDTHIAMIVSDVDTVADLKKKILLEHPLCFSSIGKIKIHALKVKRKGFFYHLSD 77

Query: 3171 QMLLKSAFTGVKKSWFLHVDAASCHAIIQSESVRDPSAQAERNNIC---TNHISLKVPVP 3001
             M ++SAF GVK++WFLHVDA+S  ++ QSE+    +  +    +C    + + L+   P
Sbjct: 78   SMFVRSAFDGVKRTWFLHVDASS--SVEQSENQLACNPDSGNLLLCLPSADGVDLQPDEP 135

Query: 3000 G-----LDDSSVPQVGSSGFVDKLVPFLGPGIMGEGMP 2902
                  LD+SS+PQ+ ++   ++ V  L     G G P
Sbjct: 136  SKKLSVLDESSLPQIKANQSANEKV--LSADEFGSGDP 171


>ref|XP_003537551.1| PREDICTED: uncharacterized protein LOC100800066 [Glycine max]
          Length = 1131

 Score =  102 bits (254), Expect = 7e-19
 Identities = 57/148 (38%), Positives = 83/148 (56%), Gaps = 3/148 (2%)
 Frame = -2

Query: 3351 VFIDTNLDTHLXXXXXXXXXVGDFKQKLLIEHPRCFPKIGEITIHSLKVRRNGCFYHLSN 3172
            VFIDTNLDTHL         V + K+ +L EHP CFPKIG+I IH +KV R G FYHL++
Sbjct: 11   VFIDTNLDTHLALVVSDLDTVSNLKKSILSEHPLCFPKIGKIQIHGIKVERKGYFYHLTD 70

Query: 3171 QMLLKSAFTGVKKSWFLHVDAASCHAIIQSESVRDPSAQAERNNICTNHISLKVPVP--- 3001
             M ++SAF+GVK+SWFL VD +      Q++       Q     I  N +++  P     
Sbjct: 71   SMPVRSAFSGVKESWFLTVDVSVLRECAQND-------QLFSLGIANNALTVGSPSKRGC 123

Query: 3000 GLDDSSVPQVGSSGFVDKLVPFLGPGIM 2917
              D+  +PQ+ +    ++ +P   P ++
Sbjct: 124  TFDNFKLPQLDNRPVENEEIPVASPHVL 151


>ref|XP_003601863.1| hypothetical protein MTR_3g086220 [Medicago truncatula]
            gi|355490911|gb|AES72114.1| hypothetical protein
            MTR_3g086220 [Medicago truncatula]
          Length = 1188

 Score =  102 bits (254), Expect = 7e-19
 Identities = 48/83 (57%), Positives = 60/83 (72%)
 Frame = -2

Query: 3351 VFIDTNLDTHLXXXXXXXXXVGDFKQKLLIEHPRCFPKIGEITIHSLKVRRNGCFYHLSN 3172
            VFIDTNLDTHL         V D K+ ++ EH  CFPKIG+I IH +KV+RNG FYHLS+
Sbjct: 12   VFIDTNLDTHLALTVSDHDTVSDLKKLIVSEHASCFPKIGQIQIHGIKVKRNGHFYHLSD 71

Query: 3171 QMLLKSAFTGVKKSWFLHVDAAS 3103
             M+++SAF GV KSWFL VD ++
Sbjct: 72   SMVVRSAFIGVNKSWFLSVDVSA 94


>ref|XP_003552797.1| PREDICTED: uncharacterized protein LOC100802021 [Glycine max]
          Length = 1133

 Score = 99.8 bits (247), Expect = 5e-18
 Identities = 47/93 (50%), Positives = 60/93 (64%)
 Frame = -2

Query: 3351 VFIDTNLDTHLXXXXXXXXXVGDFKQKLLIEHPRCFPKIGEITIHSLKVRRNGCFYHLSN 3172
            VFIDTNLDTHL         V D K+ +L EHP CFPKIG++ IH +KV R G FYHL++
Sbjct: 11   VFIDTNLDTHLALVVSDLDTVSDLKKSILSEHPLCFPKIGQVQIHGIKVERKGYFYHLTD 70

Query: 3171 QMLLKSAFTGVKKSWFLHVDAASCHAIIQSESV 3073
             M ++SAF G+  SWFL VD +      Q+E +
Sbjct: 71   SMPVRSAFRGINGSWFLSVDVSVLRECSQNEQL 103


>ref|XP_002314574.1| predicted protein [Populus trichocarpa] gi|222863614|gb|EEF00745.1|
            predicted protein [Populus trichocarpa]
          Length = 1153

 Score = 94.7 bits (234), Expect = 1e-16
 Identities = 52/113 (46%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
 Frame = -2

Query: 3351 VFIDTNLDTHLXXXXXXXXXVGDFKQKLLIEHPRCFPKIGEITIHSLKVRRNGCFYHLSN 3172
            VFIDT LDTHL         V D K+K+L EH  CFP  G+I IH+LKV+R G  YHLS 
Sbjct: 7    VFIDTTLDTHLAFIVSASDTVSDLKKKILHEHKLCFPTNGDIKIHALKVKRRGILYHLSE 66

Query: 3171 QMLLKSAFTGVKKSWFLHVDAASCHAIIQSESVRDPSAQ-AERNNICTNHISL 3016
             M +KSAF G  K+WF+ VDA++       E++ + +AQ    NN  T+ ++L
Sbjct: 67   SMFVKSAFDGTGKNWFVSVDASTI-----EENIDNLAAQVGTTNNGSTDEVNL 114