BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00004779
         (1244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3...   613   e-173
emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]   612   e-173
ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3...   591   e-166
ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3...   591   e-166
ref|XP_003538383.1| PREDICTED: 60S ribosomal export protein NMD3...   581   e-163

>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
          Length = 510

 Score =  613 bits (1581), Expect = e-173
 Identities = 297/413 (71%), Positives = 337/413 (81%)
 Frame = +1

Query: 4    EDSGMFRVPQTIGSVLCCKCGISMAPNAANMCVRCLRSEVDITEGLQKSLIIMFCPECKK 183
            E++GMF V QT+GSVLCCKCGI M PNAANMCV+CLRSE+DITEGLQK + I+ CPEC  
Sbjct: 3    EEAGMFMVHQTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITEGLQKHVTIVHCPECDT 62

Query: 184  FLQPPRTWIRAELESKELLTFCIKRLKNLNKVRLVNAEFVWTEPHSKRIKVKLNVQKEVL 363
            +LQPP+TWI+A+LESKELLTFC+KRLKNLNKVRL++AEF+WTEPHSKRIKVKL VQKEVL
Sbjct: 63   YLQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRVQKEVL 122

Query: 364  NGVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSHRRSFFYLEQLILKHD 543
            NG  LEQAYI E+V  +HMCESCSRVQANPDQWVA+VQLRQHV HRR+FFYLEQLIL+HD
Sbjct: 123  NGAILEQAYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILRHD 182

Query: 544  AAVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQLVSHDTKSNDYNYKH 723
            AA RAIKIKQMD+GIDFFF++RSH +KF+EF+GKV P +SR DKQLVSHDTKSN+YNYK+
Sbjct: 183  AAGRAIKIKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQLVSHDTKSNNYNYKY 242

Query: 724  TFSVEICPVCREDLVCLPPKVAVGLGNLGPLVLCAKVTNNIVLVDPFTXXXXXXXXXXXX 903
            TFSVEICP+CREDL+CLPPKVAV LGNLGPLV+C KV+NNI L+DPFT            
Sbjct: 243  TFSVEICPICREDLICLPPKVAVSLGNLGPLVICTKVSNNIALLDPFT---------LRH 293

Query: 904  XXXXXXXXXXXXXXXXXXXXXLVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKN 1083
                                 LVEYIVLD             KYALAD QVARVSDFGKN
Sbjct: 294  CFLDADQYWRSSFKALLSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKN 353

Query: 1084 DKIFNIRTHLGHLLNPGDYALGYDLYVANHNDIELDKYKNLVLPDAILIKKSY 1242
            D IFNIRTHLGHLLNPGD+ALGYD+Y AN ND+EL+KY+  VLP+AILIKKSY
Sbjct: 354  DTIFNIRTHLGHLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSY 406


>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
          Length = 594

 Score =  612 bits (1578), Expect = e-173
 Identities = 296/413 (71%), Positives = 337/413 (81%)
 Frame = +1

Query: 4    EDSGMFRVPQTIGSVLCCKCGISMAPNAANMCVRCLRSEVDITEGLQKSLIIMFCPECKK 183
            E++GMF V QT+GSVLCCKCGI M PNAANMCV+CLRSE+DITEGLQK + I+ CPEC  
Sbjct: 3    EEAGMFMVHQTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITEGLQKHVTIVHCPECDT 62

Query: 184  FLQPPRTWIRAELESKELLTFCIKRLKNLNKVRLVNAEFVWTEPHSKRIKVKLNVQKEVL 363
            +LQPP+TWI+A+LESKELLTFC+KRLKNLNKVRL++AEF+WTEPHSKRIKVKL VQKEVL
Sbjct: 63   YLQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRVQKEVL 122

Query: 364  NGVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSHRRSFFYLEQLILKHD 543
            NG  LEQAYI E+V  +HMCESCSRVQANPDQWVA+VQLRQHV HRR+FFYLEQLIL+HD
Sbjct: 123  NGAILEQAYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILRHD 182

Query: 544  AAVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQLVSHDTKSNDYNYKH 723
            AA RAIKIKQMD+GIDFFF++RSH +KF+EF+GKV P +SR DKQLVSHDTKSN+YNYK+
Sbjct: 183  AAGRAIKIKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQLVSHDTKSNNYNYKY 242

Query: 724  TFSVEICPVCREDLVCLPPKVAVGLGNLGPLVLCAKVTNNIVLVDPFTXXXXXXXXXXXX 903
            TFSVEICP+CREDL+CLPPKVAV LGNLGP+V+C KV+NNI L+DPFT            
Sbjct: 243  TFSVEICPICREDLICLPPKVAVSLGNLGPVVICTKVSNNIALLDPFT---------LRH 293

Query: 904  XXXXXXXXXXXXXXXXXXXXXLVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKN 1083
                                 LVEYIVLD             KYALAD QVARVSDFGKN
Sbjct: 294  CFLDADQYWRSSFKALLSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKN 353

Query: 1084 DKIFNIRTHLGHLLNPGDYALGYDLYVANHNDIELDKYKNLVLPDAILIKKSY 1242
            D IFNIRTHLGHLLNPGD+ALGYD+Y AN ND+EL+KY+  VLP+AILIKKSY
Sbjct: 354  DTIFNIRTHLGHLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSY 406


>ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
          Length = 505

 Score =  591 bits (1524), Expect = e-166
 Identities = 290/412 (70%), Positives = 331/412 (80%)
 Frame = +1

Query: 7    DSGMFRVPQTIGSVLCCKCGISMAPNAANMCVRCLRSEVDITEGLQKSLIIMFCPECKKF 186
            ++G+F V QTIG+VLCCKCGI MAPNAANMCV+CL SEVDITEGLQK L IM CP+C+ +
Sbjct: 4    ETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESY 63

Query: 187  LQPPRTWIRAELESKELLTFCIKRLKNLNKVRLVNAEFVWTEPHSKRIKVKLNVQKEVLN 366
            LQPPRTWI+A+LESKELLTFCIKRL+NLNKV+LV+AEFVWTEPHSKRIKVKL VQKEVL 
Sbjct: 64   LQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLQ 123

Query: 367  GVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSHRRSFFYLEQLILKHDA 546
            G  LEQ+Y+AEYVV DH+CESCSR+QANPDQWVA+VQLRQHV HRR+FF+LEQLILKH A
Sbjct: 124  GAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGA 183

Query: 547  AVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQLVSHDTKSNDYNYKHT 726
            A  AI+IKQMD+GIDFFFS+RSH +KF+EFVGKV PI+SR DKQLVSHD KSN +N+KHT
Sbjct: 184  AASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHT 243

Query: 727  FSVEICPVCREDLVCLPPKVAVGLGNLGPLVLCAKVTNNIVLVDPFTXXXXXXXXXXXXX 906
            FSVEI P+CREDL+CLPPKVAV LGNLGPLV+C KVTN I L+DPFT             
Sbjct: 244  FSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFT---------LRHC 294

Query: 907  XXXXXXXXXXXXXXXXXXXXLVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKND 1086
                                LVEY+VLD             KY LA  QVARVSDFG+ND
Sbjct: 295  FLDADQYWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRND 354

Query: 1087 KIFNIRTHLGHLLNPGDYALGYDLYVANHNDIELDKYKNLVLPDAILIKKSY 1242
             +F+I+THLGH+LNPGDYALGYDLY AN ND+EL+KYK L LP+AILIKKSY
Sbjct: 355  TMFSIKTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSY 406


>ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus]
          Length = 505

 Score =  591 bits (1524), Expect = e-166
 Identities = 290/412 (70%), Positives = 331/412 (80%)
 Frame = +1

Query: 7    DSGMFRVPQTIGSVLCCKCGISMAPNAANMCVRCLRSEVDITEGLQKSLIIMFCPECKKF 186
            ++G+F V QTIG+VLCCKCGI MAPNAANMCV+CL SEVDITEGLQK L IM CP+C+ +
Sbjct: 4    ETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESY 63

Query: 187  LQPPRTWIRAELESKELLTFCIKRLKNLNKVRLVNAEFVWTEPHSKRIKVKLNVQKEVLN 366
            LQPPRTWI+A+LESKELLTFCIKRL+NLNKV+LV+AEFVWTEPHSKRIKVKL VQKEVL 
Sbjct: 64   LQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLQ 123

Query: 367  GVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSHRRSFFYLEQLILKHDA 546
            G  LEQ+Y+AEYVV DH+CESCSR+QANPDQWVA+VQLRQHV HRR+FF+LEQLILKH A
Sbjct: 124  GAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGA 183

Query: 547  AVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQLVSHDTKSNDYNYKHT 726
            A  AI+IKQMD+GIDFFFS+RSH +KF+EFVGKV PI+SR DKQLVSHD KSN +N+KHT
Sbjct: 184  AASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHT 243

Query: 727  FSVEICPVCREDLVCLPPKVAVGLGNLGPLVLCAKVTNNIVLVDPFTXXXXXXXXXXXXX 906
            FSVEI P+CREDL+CLPPKVAV LGNLGPLV+C KVTN I L+DPFT             
Sbjct: 244  FSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFT---------LRHC 294

Query: 907  XXXXXXXXXXXXXXXXXXXXLVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKND 1086
                                LVEY+VLD             KY LA  QVARVSDFG+ND
Sbjct: 295  FLDADQYWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRND 354

Query: 1087 KIFNIRTHLGHLLNPGDYALGYDLYVANHNDIELDKYKNLVLPDAILIKKSY 1242
             +F+I+THLGH+LNPGDYALGYDLY AN ND+EL+KYK L LP+AILIKKSY
Sbjct: 355  TMFSIKTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSY 406


>ref|XP_003538383.1| PREDICTED: 60S ribosomal export protein NMD3-like [Glycine max]
          Length = 510

 Score =  581 bits (1498), Expect = e-163
 Identities = 286/416 (68%), Positives = 331/416 (79%), Gaps = 3/416 (0%)
 Frame = +1

Query: 4    EDSGMFRVPQTIGSVLCCKCGISMAPNAANMCVRCLRSEVDITEGLQKSLIIMFCPECKK 183
            ++SGMF V QTIGSVLCCKCGI M PNAANMCV+CLRSEVDITEGL K L+++ CPEC+ 
Sbjct: 9    QESGMFMVNQTIGSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLLKRLVLVHCPECES 68

Query: 184  FLQPPRTWIRAELESKELLTFCIKRLK---NLNKVRLVNAEFVWTEPHSKRIKVKLNVQK 354
            +LQPPR+W++ +LESKELLTFC+K+L+   N NKVRLV+AEF+WTEPHS+R+KVK+ VQK
Sbjct: 69   YLQPPRSWVKLQLESKELLTFCLKKLQKNLNSNKVRLVHAEFIWTEPHSRRVKVKVKVQK 128

Query: 355  EVLNGVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSHRRSFFYLEQLIL 534
            EVLNG  LEQ+Y  EYV  +HMCESCSRVQANPDQWVAAVQLRQHVSHRR+FFYLEQLIL
Sbjct: 129  EVLNGAILEQSYPVEYVQQEHMCESCSRVQANPDQWVAAVQLRQHVSHRRTFFYLEQLIL 188

Query: 535  KHDAAVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQLVSHDTKSNDYN 714
            KH AA  AI+IKQM++GIDFFFS+RSH +KF+EF+GKV P++SR DKQLVSHD KSN+YN
Sbjct: 189  KHGAAATAIRIKQMEQGIDFFFSNRSHGVKFVEFIGKVSPVRSRHDKQLVSHDPKSNNYN 248

Query: 715  YKHTFSVEICPVCREDLVCLPPKVAVGLGNLGPLVLCAKVTNNIVLVDPFTXXXXXXXXX 894
            YK+TFSVEI P+CREDL+CLPP+VAV LGN+GPLV+C KVTN+I L+DPFT         
Sbjct: 249  YKYTFSVEISPICREDLICLPPRVAVSLGNIGPLVICTKVTNSIALLDPFT--------- 299

Query: 895  XXXXXXXXXXXXXXXXXXXXXXXXLVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDF 1074
                                    LVEYIVLD             KY LAD QVARVSDF
Sbjct: 300  LRHCFIDADQYWRTSFKSLLTSRQLVEYIVLDVETVSSEVTIGGTKYRLADAQVARVSDF 359

Query: 1075 GKNDKIFNIRTHLGHLLNPGDYALGYDLYVANHNDIELDKYKNLVLPDAILIKKSY 1242
            GKND IFNI+THLGHLLNPGDYALGYDLY AN ND+ELDKYK  + P+AILIKKSY
Sbjct: 360  GKNDTIFNIKTHLGHLLNPGDYALGYDLYGANSNDMELDKYKGHI-PEAILIKKSY 414