BLASTX nr result
ID: Coptis24_contig00004779
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00004779 (1244 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3... 613 e-173 emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera] 612 e-173 ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3... 591 e-166 ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3... 591 e-166 ref|XP_003538383.1| PREDICTED: 60S ribosomal export protein NMD3... 581 e-163 >ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera] Length = 510 Score = 613 bits (1581), Expect = e-173 Identities = 297/413 (71%), Positives = 337/413 (81%) Frame = +1 Query: 4 EDSGMFRVPQTIGSVLCCKCGISMAPNAANMCVRCLRSEVDITEGLQKSLIIMFCPECKK 183 E++GMF V QT+GSVLCCKCGI M PNAANMCV+CLRSE+DITEGLQK + I+ CPEC Sbjct: 3 EEAGMFMVHQTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITEGLQKHVTIVHCPECDT 62 Query: 184 FLQPPRTWIRAELESKELLTFCIKRLKNLNKVRLVNAEFVWTEPHSKRIKVKLNVQKEVL 363 +LQPP+TWI+A+LESKELLTFC+KRLKNLNKVRL++AEF+WTEPHSKRIKVKL VQKEVL Sbjct: 63 YLQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRVQKEVL 122 Query: 364 NGVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSHRRSFFYLEQLILKHD 543 NG LEQAYI E+V +HMCESCSRVQANPDQWVA+VQLRQHV HRR+FFYLEQLIL+HD Sbjct: 123 NGAILEQAYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILRHD 182 Query: 544 AAVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQLVSHDTKSNDYNYKH 723 AA RAIKIKQMD+GIDFFF++RSH +KF+EF+GKV P +SR DKQLVSHDTKSN+YNYK+ Sbjct: 183 AAGRAIKIKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQLVSHDTKSNNYNYKY 242 Query: 724 TFSVEICPVCREDLVCLPPKVAVGLGNLGPLVLCAKVTNNIVLVDPFTXXXXXXXXXXXX 903 TFSVEICP+CREDL+CLPPKVAV LGNLGPLV+C KV+NNI L+DPFT Sbjct: 243 TFSVEICPICREDLICLPPKVAVSLGNLGPLVICTKVSNNIALLDPFT---------LRH 293 Query: 904 XXXXXXXXXXXXXXXXXXXXXLVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKN 1083 LVEYIVLD KYALAD QVARVSDFGKN Sbjct: 294 CFLDADQYWRSSFKALLSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKN 353 Query: 1084 DKIFNIRTHLGHLLNPGDYALGYDLYVANHNDIELDKYKNLVLPDAILIKKSY 1242 D IFNIRTHLGHLLNPGD+ALGYD+Y AN ND+EL+KY+ VLP+AILIKKSY Sbjct: 354 DTIFNIRTHLGHLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSY 406 >emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera] Length = 594 Score = 612 bits (1578), Expect = e-173 Identities = 296/413 (71%), Positives = 337/413 (81%) Frame = +1 Query: 4 EDSGMFRVPQTIGSVLCCKCGISMAPNAANMCVRCLRSEVDITEGLQKSLIIMFCPECKK 183 E++GMF V QT+GSVLCCKCGI M PNAANMCV+CLRSE+DITEGLQK + I+ CPEC Sbjct: 3 EEAGMFMVHQTVGSVLCCKCGIPMTPNAANMCVKCLRSEIDITEGLQKHVTIVHCPECDT 62 Query: 184 FLQPPRTWIRAELESKELLTFCIKRLKNLNKVRLVNAEFVWTEPHSKRIKVKLNVQKEVL 363 +LQPP+TWI+A+LESKELLTFC+KRLKNLNKVRL++AEF+WTEPHSKRIKVKL VQKEVL Sbjct: 63 YLQPPKTWIKAQLESKELLTFCVKRLKNLNKVRLIHAEFIWTEPHSKRIKVKLRVQKEVL 122 Query: 364 NGVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSHRRSFFYLEQLILKHD 543 NG LEQAYI E+V +HMCESCSRVQANPDQWVA+VQLRQHV HRR+FFYLEQLIL+HD Sbjct: 123 NGAILEQAYIVEFVQQEHMCESCSRVQANPDQWVASVQLRQHVPHRRTFFYLEQLILRHD 182 Query: 544 AAVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQLVSHDTKSNDYNYKH 723 AA RAIKIKQMD+GIDFFF++RSH +KF+EF+GKV P +SR DKQLVSHDTKSN+YNYK+ Sbjct: 183 AAGRAIKIKQMDQGIDFFFANRSHGVKFVEFIGKVTPSRSRHDKQLVSHDTKSNNYNYKY 242 Query: 724 TFSVEICPVCREDLVCLPPKVAVGLGNLGPLVLCAKVTNNIVLVDPFTXXXXXXXXXXXX 903 TFSVEICP+CREDL+CLPPKVAV LGNLGP+V+C KV+NNI L+DPFT Sbjct: 243 TFSVEICPICREDLICLPPKVAVSLGNLGPVVICTKVSNNIALLDPFT---------LRH 293 Query: 904 XXXXXXXXXXXXXXXXXXXXXLVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKN 1083 LVEYIVLD KYALAD QVARVSDFGKN Sbjct: 294 CFLDADQYWRSSFKALLSSRQLVEYIVLDVEIVSSEVNVGGSKYALADAQVARVSDFGKN 353 Query: 1084 DKIFNIRTHLGHLLNPGDYALGYDLYVANHNDIELDKYKNLVLPDAILIKKSY 1242 D IFNIRTHLGHLLNPGD+ALGYD+Y AN ND+EL+KY+ VLP+AILIKKSY Sbjct: 354 DTIFNIRTHLGHLLNPGDHALGYDVYAANSNDMELEKYRGFVLPEAILIKKSY 406 >ref|XP_004162315.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus] Length = 505 Score = 591 bits (1524), Expect = e-166 Identities = 290/412 (70%), Positives = 331/412 (80%) Frame = +1 Query: 7 DSGMFRVPQTIGSVLCCKCGISMAPNAANMCVRCLRSEVDITEGLQKSLIIMFCPECKKF 186 ++G+F V QTIG+VLCCKCGI MAPNAANMCV+CL SEVDITEGLQK L IM CP+C+ + Sbjct: 4 ETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESY 63 Query: 187 LQPPRTWIRAELESKELLTFCIKRLKNLNKVRLVNAEFVWTEPHSKRIKVKLNVQKEVLN 366 LQPPRTWI+A+LESKELLTFCIKRL+NLNKV+LV+AEFVWTEPHSKRIKVKL VQKEVL Sbjct: 64 LQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLQ 123 Query: 367 GVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSHRRSFFYLEQLILKHDA 546 G LEQ+Y+AEYVV DH+CESCSR+QANPDQWVA+VQLRQHV HRR+FF+LEQLILKH A Sbjct: 124 GAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGA 183 Query: 547 AVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQLVSHDTKSNDYNYKHT 726 A AI+IKQMD+GIDFFFS+RSH +KF+EFVGKV PI+SR DKQLVSHD KSN +N+KHT Sbjct: 184 AASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHT 243 Query: 727 FSVEICPVCREDLVCLPPKVAVGLGNLGPLVLCAKVTNNIVLVDPFTXXXXXXXXXXXXX 906 FSVEI P+CREDL+CLPPKVAV LGNLGPLV+C KVTN I L+DPFT Sbjct: 244 FSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFT---------LRHC 294 Query: 907 XXXXXXXXXXXXXXXXXXXXLVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKND 1086 LVEY+VLD KY LA QVARVSDFG+ND Sbjct: 295 FLDADQYWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRND 354 Query: 1087 KIFNIRTHLGHLLNPGDYALGYDLYVANHNDIELDKYKNLVLPDAILIKKSY 1242 +F+I+THLGH+LNPGDYALGYDLY AN ND+EL+KYK L LP+AILIKKSY Sbjct: 355 TMFSIKTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSY 406 >ref|XP_004143504.1| PREDICTED: 60S ribosomal export protein NMD3-like [Cucumis sativus] Length = 505 Score = 591 bits (1524), Expect = e-166 Identities = 290/412 (70%), Positives = 331/412 (80%) Frame = +1 Query: 7 DSGMFRVPQTIGSVLCCKCGISMAPNAANMCVRCLRSEVDITEGLQKSLIIMFCPECKKF 186 ++G+F V QTIG+VLCCKCGI MAPNAANMCV+CL SEVDITEGLQK L IM CP+C+ + Sbjct: 4 ETGLFSVQQTIGTVLCCKCGIPMAPNAANMCVKCLCSEVDITEGLQKQLTIMHCPDCESY 63 Query: 187 LQPPRTWIRAELESKELLTFCIKRLKNLNKVRLVNAEFVWTEPHSKRIKVKLNVQKEVLN 366 LQPPRTWI+A+LESKELLTFCIKRL+NLNKV+LV+AEFVWTEPHSKRIKVKL VQKEVL Sbjct: 64 LQPPRTWIKAQLESKELLTFCIKRLRNLNKVKLVHAEFVWTEPHSKRIKVKLKVQKEVLQ 123 Query: 367 GVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSHRRSFFYLEQLILKHDA 546 G LEQ+Y+AEYVV DH+CESCSR+QANPDQWVA+VQLRQHV HRR+FF+LEQLILKH A Sbjct: 124 GAILEQSYVAEYVVQDHLCESCSRIQANPDQWVASVQLRQHVPHRRTFFFLEQLILKHGA 183 Query: 547 AVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQLVSHDTKSNDYNYKHT 726 A AI+IKQMD+GIDFFFS+RSH +KF+EFVGKV PI+SR DKQLVSHD KSN +N+KHT Sbjct: 184 AASAIRIKQMDQGIDFFFSNRSHGVKFVEFVGKVAPIRSRHDKQLVSHDPKSNIHNHKHT 243 Query: 727 FSVEICPVCREDLVCLPPKVAVGLGNLGPLVLCAKVTNNIVLVDPFTXXXXXXXXXXXXX 906 FSVEI P+CREDL+CLPPKVAV LGNLGPLV+C KVTN I L+DPFT Sbjct: 244 FSVEISPICREDLICLPPKVAVSLGNLGPLVICTKVTNAIALLDPFT---------LRHC 294 Query: 907 XXXXXXXXXXXXXXXXXXXXLVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDFGKND 1086 LVEY+VLD KY LA QVARVSDFG+ND Sbjct: 295 FLDADQYWRTSFRSLLTSRQLVEYVVLDIENVSTEVNVAGSKYMLAYAQVARVSDFGRND 354 Query: 1087 KIFNIRTHLGHLLNPGDYALGYDLYVANHNDIELDKYKNLVLPDAILIKKSY 1242 +F+I+THLGH+LNPGDYALGYDLY AN ND+EL+KYK L LP+AILIKKSY Sbjct: 355 TMFSIKTHLGHILNPGDYALGYDLYGANSNDMELEKYKGLELPEAILIKKSY 406 >ref|XP_003538383.1| PREDICTED: 60S ribosomal export protein NMD3-like [Glycine max] Length = 510 Score = 581 bits (1498), Expect = e-163 Identities = 286/416 (68%), Positives = 331/416 (79%), Gaps = 3/416 (0%) Frame = +1 Query: 4 EDSGMFRVPQTIGSVLCCKCGISMAPNAANMCVRCLRSEVDITEGLQKSLIIMFCPECKK 183 ++SGMF V QTIGSVLCCKCGI M PNAANMCV+CLRSEVDITEGL K L+++ CPEC+ Sbjct: 9 QESGMFMVNQTIGSVLCCKCGIPMQPNAANMCVKCLRSEVDITEGLLKRLVLVHCPECES 68 Query: 184 FLQPPRTWIRAELESKELLTFCIKRLK---NLNKVRLVNAEFVWTEPHSKRIKVKLNVQK 354 +LQPPR+W++ +LESKELLTFC+K+L+ N NKVRLV+AEF+WTEPHS+R+KVK+ VQK Sbjct: 69 YLQPPRSWVKLQLESKELLTFCLKKLQKNLNSNKVRLVHAEFIWTEPHSRRVKVKVKVQK 128 Query: 355 EVLNGVKLEQAYIAEYVVTDHMCESCSRVQANPDQWVAAVQLRQHVSHRRSFFYLEQLIL 534 EVLNG LEQ+Y EYV +HMCESCSRVQANPDQWVAAVQLRQHVSHRR+FFYLEQLIL Sbjct: 129 EVLNGAILEQSYPVEYVQQEHMCESCSRVQANPDQWVAAVQLRQHVSHRRTFFYLEQLIL 188 Query: 535 KHDAAVRAIKIKQMDEGIDFFFSSRSHALKFLEFVGKVVPIKSRTDKQLVSHDTKSNDYN 714 KH AA AI+IKQM++GIDFFFS+RSH +KF+EF+GKV P++SR DKQLVSHD KSN+YN Sbjct: 189 KHGAAATAIRIKQMEQGIDFFFSNRSHGVKFVEFIGKVSPVRSRHDKQLVSHDPKSNNYN 248 Query: 715 YKHTFSVEICPVCREDLVCLPPKVAVGLGNLGPLVLCAKVTNNIVLVDPFTXXXXXXXXX 894 YK+TFSVEI P+CREDL+CLPP+VAV LGN+GPLV+C KVTN+I L+DPFT Sbjct: 249 YKYTFSVEISPICREDLICLPPRVAVSLGNIGPLVICTKVTNSIALLDPFT--------- 299 Query: 895 XXXXXXXXXXXXXXXXXXXXXXXXLVEYIVLDXXXXXXXXXXXXXKYALADVQVARVSDF 1074 LVEYIVLD KY LAD QVARVSDF Sbjct: 300 LRHCFIDADQYWRTSFKSLLTSRQLVEYIVLDVETVSSEVTIGGTKYRLADAQVARVSDF 359 Query: 1075 GKNDKIFNIRTHLGHLLNPGDYALGYDLYVANHNDIELDKYKNLVLPDAILIKKSY 1242 GKND IFNI+THLGHLLNPGDYALGYDLY AN ND+ELDKYK + P+AILIKKSY Sbjct: 360 GKNDTIFNIKTHLGHLLNPGDYALGYDLYGANSNDMELDKYKGHI-PEAILIKKSY 414